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PI0027761 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027761
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr06:1196456..1197039
RNA-Seq ExpressionPI0027761
SyntenyPI0027761
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038975.1 retrotransposon protein [Cucumis melo var. makuwa]2.2e-5065.24Show/hide
Query:  MIAERMPGHNITATT-IDCRIKTMKRAFQAIFEMRGSTCGGFGWNDELKCIIAEKDLFDSWVKSHPTAKGLLNKPFLHYDDLCYVFRRDRATRGRAETFD
        M+AE++PG  + ATT IDCRIKT+KR FQAI EMRG  C GFGWNDE KCI+AEK+LFD+WV+SHP AKGLLNKPF +YD+L YVF RDRAT   AETF 
Subjt:  MIAERMPGHNITATT-IDCRIKTMKRAFQAIFEMRGSTCGGFGWNDELKCIIAEKDLFDSWVKSHPTAKGLLNKPFLHYDDLCYVFRRDRATRGRAETFD

Query:  DVGSNVP-PGFEGFAHYDGNDMENSTMYSQGLDMSPDDIMTPRSVRMSEARPGSSGSKRKRGRQ
        DVGSN P  G++ F   DGN+ + S +YSQG+D+S DD+   R  R SE R GSSGSKRKRG Q
Subjt:  DVGSNVP-PGFEGFAHYDGNDMENSTMYSQGLDMSPDDIMTPRSVRMSEARPGSSGSKRKRGRQ

KAA0041588.1 retrotransposon protein [Cucumis melo var. makuwa]6.3e-5064.63Show/hide
Query:  MIAERMPGHNITATT-IDCRIKTMKRAFQAIFEMRGSTCGGFGWNDELKCIIAEKDLFDSWVKSHPTAKGLLNKPFLHYDDLCYVFRRDRATRGRAETFD
        M+AE++PG  + ATT IDCRIKT+KR FQAI EMRG  C GFGWNDE KCI+AEK+LFD+WV+SHP AKGLLNKPF +YD+L YVF RDRAT   AETF 
Subjt:  MIAERMPGHNITATT-IDCRIKTMKRAFQAIFEMRGSTCGGFGWNDELKCIIAEKDLFDSWVKSHPTAKGLLNKPFLHYDDLCYVFRRDRATRGRAETFD

Query:  DVGSNVP-PGFEGFAHYDGNDMENSTMYSQGLDMSPDDIMTPRSVRMSEARPGSSGSKRKRGRQ
        DVGSN P  G++ F   DGN+ +   +YSQG+D+S DD+   R  R SE R GSSGSKRKRG Q
Subjt:  DVGSNVP-PGFEGFAHYDGNDMENSTMYSQGLDMSPDDIMTPRSVRMSEARPGSSGSKRKRGRQ

KAA0047075.1 retrotransposon protein [Cucumis melo var. makuwa]3.4e-5164.78Show/hide
Query:  MIAERMPGHNITATTIDCRIKTMKRAFQAIFEMRGSTCGGFGWNDELKCIIAEKDLFDSWVKSHPTAKGLLNKPFLHYDDLCYVFRRDRATRGRAETFDD
        M+A ++PG NI A+TID RIK MKR F A+ EMRG  C GFGWNDE KCI+ EK+LFD WVKSHP AKGLLNK F+HYD+L YVF +DRAT GRAE+F D
Subjt:  MIAERMPGHNITATTIDCRIKTMKRAFQAIFEMRGSTCGGFGWNDELKCIIAEKDLFDSWVKSHPTAKGLLNKPFLHYDDLCYVFRRDRATRGRAETFDD

Query:  VGSNVPPGFEGFAHYDGNDMENSTMYSQGLDMSPDDIMTPRSVRMSEARPGSSGSKRKR
        +GSN P G++ FA     D   S MYS GL+MSPDD+M  R+VR+SE R  SSGSKRKR
Subjt:  VGSNVPPGFEGFAHYDGNDMENSTMYSQGLDMSPDDIMTPRSVRMSEARPGSSGSKRKR

KAA0052259.1 retrotransposon protein [Cucumis melo var. makuwa]6.3e-5064.02Show/hide
Query:  MIAERMPGHNITATT-IDCRIKTMKRAFQAIFEMRGSTCGGFGWNDELKCIIAEKDLFDSWVKSHPTAKGLLNKPFLHYDDLCYVFRRDRATRGRAETFD
        M+AE++PG+ + ATT IDCRIKT+KR FQAI E+RG  C GFGWNDE KCI+AEK+LFD+WV+SHP AKGLLNKPF +YD+L YVF RDRAT   AETF 
Subjt:  MIAERMPGHNITATT-IDCRIKTMKRAFQAIFEMRGSTCGGFGWNDELKCIIAEKDLFDSWVKSHPTAKGLLNKPFLHYDDLCYVFRRDRATRGRAETFD

Query:  DVGSNVP-PGFEGFAHYDGNDMENSTMYSQGLDMSPDDIMTPRSVRMSEARPGSSGSKRKRGRQ
        DVGSN P  G++ F   DGN+ + S +YSQG+D+S DD+   R  R SE R  SSGSKRKRG Q
Subjt:  DVGSNVP-PGFEGFAHYDGNDMENSTMYSQGLDMSPDDIMTPRSVRMSEARPGSSGSKRKRGRQ

KAA0066208.1 retrotransposon protein [Cucumis melo var. makuwa]6.3e-5065.24Show/hide
Query:  MIAERMPGHNITATT-IDCRIKTMKRAFQAIFEMRGSTCGGFGWNDELKCIIAEKDLFDSWVKSHPTAKGLLNKPFLHYDDLCYVFRRDRATRGRAETFD
        M+AE++PG  + ATT IDCRIKT+KR FQAI EMRG  C GFGWNDE KCIIAEK+LFD+WV+SHP AKGLLNKPF +YD+L YVF RDRAT   AETF 
Subjt:  MIAERMPGHNITATT-IDCRIKTMKRAFQAIFEMRGSTCGGFGWNDELKCIIAEKDLFDSWVKSHPTAKGLLNKPFLHYDDLCYVFRRDRATRGRAETFD

Query:  DVGSNVP-PGFEGFAHYDGNDMENSTMYSQGLDMSPDDIMTPRSVRMSEARPGSSGSKRKRGRQ
        DVGSN P  G++ F   DGN+ +   +YSQG+D+S DD+   R  R SE R GSSGSKRKRG Q
Subjt:  DVGSNVP-PGFEGFAHYDGNDMENSTMYSQGLDMSPDDIMTPRSVRMSEARPGSSGSKRKRGRQ

TrEMBL top hitse value%identityAlignment
A0A5A7TC56 Retrotransposon protein1.1e-5065.24Show/hide
Query:  MIAERMPGHNITATT-IDCRIKTMKRAFQAIFEMRGSTCGGFGWNDELKCIIAEKDLFDSWVKSHPTAKGLLNKPFLHYDDLCYVFRRDRATRGRAETFD
        M+AE++PG  + ATT IDCRIKT+KR FQAI EMRG  C GFGWNDE KCI+AEK+LFD+WV+SHP AKGLLNKPF +YD+L YVF RDRAT   AETF 
Subjt:  MIAERMPGHNITATT-IDCRIKTMKRAFQAIFEMRGSTCGGFGWNDELKCIIAEKDLFDSWVKSHPTAKGLLNKPFLHYDDLCYVFRRDRATRGRAETFD

Query:  DVGSNVP-PGFEGFAHYDGNDMENSTMYSQGLDMSPDDIMTPRSVRMSEARPGSSGSKRKRGRQ
        DVGSN P  G++ F   DGN+ + S +YSQG+D+S DD+   R  R SE R GSSGSKRKRG Q
Subjt:  DVGSNVP-PGFEGFAHYDGNDMENSTMYSQGLDMSPDDIMTPRSVRMSEARPGSSGSKRKRGRQ

A0A5A7U098 Retrotransposon protein1.6e-5164.78Show/hide
Query:  MIAERMPGHNITATTIDCRIKTMKRAFQAIFEMRGSTCGGFGWNDELKCIIAEKDLFDSWVKSHPTAKGLLNKPFLHYDDLCYVFRRDRATRGRAETFDD
        M+A ++PG NI A+TID RIK MKR F A+ EMRG  C GFGWNDE KCI+ EK+LFD WVKSHP AKGLLNK F+HYD+L YVF +DRAT GRAE+F D
Subjt:  MIAERMPGHNITATTIDCRIKTMKRAFQAIFEMRGSTCGGFGWNDELKCIIAEKDLFDSWVKSHPTAKGLLNKPFLHYDDLCYVFRRDRATRGRAETFDD

Query:  VGSNVPPGFEGFAHYDGNDMENSTMYSQGLDMSPDDIMTPRSVRMSEARPGSSGSKRKR
        +GSN P G++ FA     D   S MYS GL+MSPDD+M  R+VR+SE R  SSGSKRKR
Subjt:  VGSNVPPGFEGFAHYDGNDMENSTMYSQGLDMSPDDIMTPRSVRMSEARPGSSGSKRKR

A0A5A7UFK7 Retrotransposon protein3.1e-5064.02Show/hide
Query:  MIAERMPGHNITATT-IDCRIKTMKRAFQAIFEMRGSTCGGFGWNDELKCIIAEKDLFDSWVKSHPTAKGLLNKPFLHYDDLCYVFRRDRATRGRAETFD
        M+AE++PG+ + ATT IDCRIKT+KR FQAI E+RG  C GFGWNDE KCI+AEK+LFD+WV+SHP AKGLLNKPF +YD+L YVF RDRAT   AETF 
Subjt:  MIAERMPGHNITATT-IDCRIKTMKRAFQAIFEMRGSTCGGFGWNDELKCIIAEKDLFDSWVKSHPTAKGLLNKPFLHYDDLCYVFRRDRATRGRAETFD

Query:  DVGSNVP-PGFEGFAHYDGNDMENSTMYSQGLDMSPDDIMTPRSVRMSEARPGSSGSKRKRGRQ
        DVGSN P  G++ F   DGN+ + S +YSQG+D+S DD+   R  R SE R  SSGSKRKRG Q
Subjt:  DVGSNVP-PGFEGFAHYDGNDMENSTMYSQGLDMSPDDIMTPRSVRMSEARPGSSGSKRKRGRQ

A0A5D3C1M0 Retrotransposon protein3.1e-5061.45Show/hide
Query:  MIAERMPGHNITATTIDCRIKTMKRAFQAIFEMRGSTCGGFGWNDELKCIIAEKDLFDSWVKSHPTAKGLLNKPFLHYDDLCYVFRRDRATRGRAETFDD
        M+A ++PG NI A+TID RIK MKR F A+ EMRG  C GFGWNDE KCI+ EK+LFD WVKSHP AKGLLNK F+HYD+L YVF +DRAT GRAE+F D
Subjt:  MIAERMPGHNITATTIDCRIKTMKRAFQAIFEMRGSTCGGFGWNDELKCIIAEKDLFDSWVKSHPTAKGLLNKPFLHYDDLCYVFRRDRATRGRAETFDD

Query:  VGSNVPPGFEGFAHYDGNDMENSTMYSQGLDMSPDDIMTPRSVRMSEARPGSSGSKRKRGRQALEA
        +GSN PPG++  A     D +   MYS GL+MSPDD+M  R+ R+SE R  SSGSKRKR   A ++
Subjt:  VGSNVPPGFEGFAHYDGNDMENSTMYSQGLDMSPDDIMTPRSVRMSEARPGSSGSKRKRGRQALEA

A0A5D3D831 Retrotransposon protein3.1e-5064.42Show/hide
Query:  MIAERMPGHNITATT-IDCRIKTMKRAFQAIFEMRGSTCGGFGWNDELKCIIAEKDLFDSWVKSHPTAKGLLNKPFLHYDDLCYVFRRDRATRGRAETFD
        M+A+++PG  + ATT ID RIKT+KR FQAI EMRG  C GFGWN+E KCII EK+LFD+WV+SHP AKGLLNKPF +YD+L YVF  DRAT   AETF 
Subjt:  MIAERMPGHNITATT-IDCRIKTMKRAFQAIFEMRGSTCGGFGWNDELKCIIAEKDLFDSWVKSHPTAKGLLNKPFLHYDDLCYVFRRDRATRGRAETFD

Query:  DVGSNVPPGFEGFAHYDGNDMENSTMYSQGLDMSPDDIMTPRSVRMSEARPGSSGSKRKRGRQ
        D+GSN P G+EGF   DGN+ E S++YSQG+DMS DD+   R  R SE R GS+GSKRKRG Q
Subjt:  DVGSNVPPGFEGFAHYDGNDMENSTMYSQGLDMSPDDIMTPRSVRMSEARPGSSGSKRKRGRQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G24960.1 unknown protein3.0e-0534.04Show/hide
Query:  GGFGWNDELKCIIAEKDLFDSWVKSHPTAKGLLNKPFLHYDDLCYVF
        GGF W+   + +I +  L+  ++K+HP A+    KP L++ DLC ++
Subjt:  GGFGWNDELKCIIAEKDLFDSWVKSHPTAKGLLNKPFLHYDDLCYVF

AT2G24960.2 unknown protein3.0e-0534.04Show/hide
Query:  GGFGWNDELKCIIAEKDLFDSWVKSHPTAKGLLNKPFLHYDDLCYVF
        GGF W+   + +I +  L+  ++K+HP A+    KP L++ DLC ++
Subjt:  GGFGWNDELKCIIAEKDLFDSWVKSHPTAKGLLNKPFLHYDDLCYVF

AT4G02210.1 unknown protein7.1e-0728.77Show/hide
Query:  NITATTIDCRIKTMKRAFQAIFEMRGSTCGGFGWNDELKCIIAEKDLFDSWVKSHPTAKGLLNKPFLHYDDLC
        N     +  R K+++R F AI  +  S   GF W++E + + A+ +++  ++K+H  A+  + +P  +Y DLC
Subjt:  NITATTIDCRIKTMKRAFQAIFEMRGSTCGGFGWNDELKCIIAEKDLFDSWVKSHPTAKGLLNKPFLHYDDLC

AT4G02210.2 unknown protein7.1e-0728.77Show/hide
Query:  NITATTIDCRIKTMKRAFQAIFEMRGSTCGGFGWNDELKCIIAEKDLFDSWVKSHPTAKGLLNKPFLHYDDLC
        N     +  R K+++R F AI  +  S   GF W++E + + A+ +++  ++K+H  A+  + +P  +Y DLC
Subjt:  NITATTIDCRIKTMKRAFQAIFEMRGSTCGGFGWNDELKCIIAEKDLFDSWVKSHPTAKGLLNKPFLHYDDLC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGCCGAGAGGATGCCCGGACATAACATAACGGCTACGACAATAGATTGTCGGATCAAGACAATGAAAAGAGCATTCCAAGCGATATTTGAGATGAGGGGCTCGAC
GTGTGGTGGGTTCGGTTGGAATGATGAGCTGAAATGCATCATTGCCGAGAAAGACTTGTTCGACAGTTGGGTGAAGAGTCATCCAACCGCAAAGGGTCTCCTAAACAAAC
CCTTTCTCCACTACGACGACCTTTGCTACGTGTTCAGAAGAGATCGTGCAACAAGAGGTCGAGCTGAAACCTTCGACGATGTTGGGTCGAACGTGCCTCCAGGCTTCGAA
GGATTTGCCCACTACGACGGGAACGATATGGAGAACTCGACGATGTACAGTCAGGGCCTAGACATGTCACCTGACGACATAATGACTCCACGATCGGTTCGTATGTCTGA
GGCTAGGCCTGGTTCGAGCGGGTCGAAGAGAAAACGGGGAAGGCAGGCATTGGAGGCGGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGATTGCCGAGAGGATGCCCGGACATAACATAACGGCTACGACAATAGATTGTCGGATCAAGACAATGAAAAGAGCATTCCAAGCGATATTTGAGATGAGGGGCTCGAC
GTGTGGTGGGTTCGGTTGGAATGATGAGCTGAAATGCATCATTGCCGAGAAAGACTTGTTCGACAGTTGGGTGAAGAGTCATCCAACCGCAAAGGGTCTCCTAAACAAAC
CCTTTCTCCACTACGACGACCTTTGCTACGTGTTCAGAAGAGATCGTGCAACAAGAGGTCGAGCTGAAACCTTCGACGATGTTGGGTCGAACGTGCCTCCAGGCTTCGAA
GGATTTGCCCACTACGACGGGAACGATATGGAGAACTCGACGATGTACAGTCAGGGCCTAGACATGTCACCTGACGACATAATGACTCCACGATCGGTTCGTATGTCTGA
GGCTAGGCCTGGTTCGAGCGGGTCGAAGAGAAAACGGGGAAGGCAGGCATTGGAGGCGGCATAA
Protein sequenceShow/hide protein sequence
MIAERMPGHNITATTIDCRIKTMKRAFQAIFEMRGSTCGGFGWNDELKCIIAEKDLFDSWVKSHPTAKGLLNKPFLHYDDLCYVFRRDRATRGRAETFDDVGSNVPPGFE
GFAHYDGNDMENSTMYSQGLDMSPDDIMTPRSVRMSEARPGSSGSKRKRGRQALEAA