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PI0027764 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027764
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionProtein RRP5
Genome locationchr06:24570765..24573387
RNA-Seq ExpressionPI0027764
SyntenyPI0027764
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577394.1 Chlorophyll a-b binding protein 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.8e-3883.04Show/hide
Query:  VFVVNLRSSHLLAMAKNRNKKKGSGAVSMDVTENTVHELPQAMDVSESSVHKPASGALNLKLKKGRPMKRSKNVRKTKAMAKAISKSEQSMEKFLKNQSK
        VFVV+L  ++L AMAKN+NKKK SGA+SMD+TENT  ELPQAMDVSES+VHKPASGALNLKLKKGRPMKRSKNVRKT A AKAISK+EQS EK LKNQSK
Subjt:  VFVVNLRSSHLLAMAKNRNKKKGSGAVSMDVTENTVHELPQAMDVSESSVHKPASGALNLKLKKGRPMKRSKNVRKTKAMAKAISKSEQSMEKFLKNQSK

Query:  TTRIQSAKTLYE
        TTRI SAKTLYE
Subjt:  TTRIQSAKTLYE

XP_004149295.1 uncharacterized protein LOC101207037 [Cucumis sativus]1.4e-3489.9Show/hide
Query:  MAKNRNKKKGSGAVSMDVTENTVHELPQAMDVSESSVHKPASGALNLKLKKGRPMKRSKNVRKTKAMAKAISKSEQSMEKFLKNQSKTTRIQSAKTLYE
        MAKNRNKK+ SGAVSMDVTEN+V ELPQAMDVS SSVHKPASGAL+LKLKKGRPMKR+KNVRKTKA+AKAISKSEQSMEK LKN SKTTRIQSAKTLYE
Subjt:  MAKNRNKKKGSGAVSMDVTENTVHELPQAMDVSESSVHKPASGALNLKLKKGRPMKRSKNVRKTKAMAKAISKSEQSMEKFLKNQSKTTRIQSAKTLYE

XP_008452291.1 PREDICTED: uncharacterized protein LOC103493362 [Cucumis melo]3.1e-3791.92Show/hide
Query:  MAKNRNKKKGSGAVSMDVTENTVHELPQAMDVSESSVHKPASGALNLKLKKGRPMKRSKNVRKTKAMAKAISKSEQSMEKFLKNQSKTTRIQSAKTLYE
        MAKNRNKKK  GAVSMDVTEN+VHELPQAMDVS S+VHKPASGAL+LKLKKGRPMKRSKNVRKTKA+AKAISKSEQSMEK LKNQSKTTRIQSAKTLYE
Subjt:  MAKNRNKKKGSGAVSMDVTENTVHELPQAMDVSESSVHKPASGALNLKLKKGRPMKRSKNVRKTKAMAKAISKSEQSMEKFLKNQSKTTRIQSAKTLYE

XP_022929206.1 uncharacterized protein LOC111435867 [Cucurbita moschata]6.4e-3586.87Show/hide
Query:  MAKNRNKKKGSGAVSMDVTENTVHELPQAMDVSESSVHKPASGALNLKLKKGRPMKRSKNVRKTKAMAKAISKSEQSMEKFLKNQSKTTRIQSAKTLYE
        MAKN+NKKK SGA+SMD+TENT  ELPQAMDVSES+VHKPASGALNLKLKKGRPMKRSKNVRKT A AKAISK+EQS EK LKNQSKTTRI SAKTLYE
Subjt:  MAKNRNKKKGSGAVSMDVTENTVHELPQAMDVSESSVHKPASGALNLKLKKGRPMKRSKNVRKTKAMAKAISKSEQSMEKFLKNQSKTTRIQSAKTLYE

XP_038903593.1 uncharacterized protein LOC120090147 [Benincasa hispida]5.3e-3791.92Show/hide
Query:  MAKNRNKKKGSGAVSMDVTENTVHELPQAMDVSESSVHKPASGALNLKLKKGRPMKRSKNVRKTKAMAKAISKSEQSMEKFLKNQSKTTRIQSAKTLYE
        MAKNRNKKK SG VSMDVTENTVHELPQAMDVSES+VHKP SGALNLKLKKGRPMKRSKNVRKTKAMAKAISKSEQS EK LKNQSKT RIQSAK LYE
Subjt:  MAKNRNKKKGSGAVSMDVTENTVHELPQAMDVSESSVHKPASGALNLKLKKGRPMKRSKNVRKTKAMAKAISKSEQSMEKFLKNQSKTTRIQSAKTLYE

TrEMBL top hitse value%identityAlignment
A0A1S3BUB2 uncharacterized protein LOC1034933621.5e-3791.92Show/hide
Query:  MAKNRNKKKGSGAVSMDVTENTVHELPQAMDVSESSVHKPASGALNLKLKKGRPMKRSKNVRKTKAMAKAISKSEQSMEKFLKNQSKTTRIQSAKTLYE
        MAKNRNKKK  GAVSMDVTEN+VHELPQAMDVS S+VHKPASGAL+LKLKKGRPMKRSKNVRKTKA+AKAISKSEQSMEK LKNQSKTTRIQSAKTLYE
Subjt:  MAKNRNKKKGSGAVSMDVTENTVHELPQAMDVSESSVHKPASGALNLKLKKGRPMKRSKNVRKTKAMAKAISKSEQSMEKFLKNQSKTTRIQSAKTLYE

A0A6A6MLZ5 Uncharacterized protein2.2e-2573.74Show/hide
Query:  MAKNRNKKKGSGAVSMDVTENTVHELPQAMDVSESSVHKPASGALNLKLKKGRPMKRSKNVRKTKAMAKAISKSEQSMEKFLKNQSKTTRIQSAKTLYE
        MAKNRNKKK +GAVSMD+TE TV ++PQAMD SES V K ASG  N K+ KGRPMKRSKNVRK KA+AKAISK+EQS+EK LKN+SKT R QSAK LY+
Subjt:  MAKNRNKKKGSGAVSMDVTENTVHELPQAMDVSESSVHKPASGALNLKLKKGRPMKRSKNVRKTKAMAKAISKSEQSMEKFLKNQSKTTRIQSAKTLYE

A0A6J1CP23 uncharacterized protein LOC1110127893.5e-2685.37Show/hide
Query:  MDVTENTVHELPQAMDVSESSVHKPASGALNLKLKKGRPMKRSKNVRKTKAMAKAISKSEQSMEKFLKNQSKTTRIQSAKTL
        MD+TENTV +LPQAMDVSES VHKP SG LNLKL+KGRPMKRS+NVRKTKAMAKAI KSEQS EK +KNQSKTTRIQSAKTL
Subjt:  MDVTENTVHELPQAMDVSESSVHKPASGALNLKLKKGRPMKRSKNVRKTKAMAKAISKSEQSMEKFLKNQSKTTRIQSAKTL

A0A6J1EMH0 uncharacterized protein LOC1114358673.1e-3586.87Show/hide
Query:  MAKNRNKKKGSGAVSMDVTENTVHELPQAMDVSESSVHKPASGALNLKLKKGRPMKRSKNVRKTKAMAKAISKSEQSMEKFLKNQSKTTRIQSAKTLYE
        MAKN+NKKK SGA+SMD+TENT  ELPQAMDVSES+VHKPASGALNLKLKKGRPMKRSKNVRKT A AKAISK+EQS EK LKNQSKTTRI SAKTLYE
Subjt:  MAKNRNKKKGSGAVSMDVTENTVHELPQAMDVSESSVHKPASGALNLKLKKGRPMKRSKNVRKTKAMAKAISKSEQSMEKFLKNQSKTTRIQSAKTLYE

A0A6J1J4F8 uncharacterized protein LOC1114833161.2e-3486.87Show/hide
Query:  MAKNRNKKKGSGAVSMDVTENTVHELPQAMDVSESSVHKPASGALNLKLKKGRPMKRSKNVRKTKAMAKAISKSEQSMEKFLKNQSKTTRIQSAKTLYE
        MAKN+NKK+ SGA+SMD+TENT HELPQAMDVSES+VHKPASGALNLKLKKGRPMKRSKNVRKT A AKAISK+EQS EK LKNQSKTTRI SAKTLYE
Subjt:  MAKNRNKKKGSGAVSMDVTENTVHELPQAMDVSESSVHKPASGALNLKLKKGRPMKRSKNVRKTKAMAKAISKSEQSMEKFLKNQSKTTRIQSAKTLYE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G27380.1 unknown protein3.3e-0533.33Show/hide
Query:  MAKNRNKKKGSGAVSMDVTEN-TVHE-LPQAMDVSESSVHKPASGALNL-KLKKGRP-------------------------------------------
        M K RNKK      SMDV+E+ +V E  PQ MD +E+   K AS A +L   +KG+P                                           
Subjt:  MAKNRNKKKGSGAVSMDVTEN-TVHE-LPQAMDVSESSVHKPASGALNL-KLKKGRP-------------------------------------------

Query:  -----------MKRSKNVRKTKAMAKAISKSEQSMEKFLKNQSKTTRIQSAKTLYE
                   MKR+KN RK KA+AKAI+ SE+   K  K+++KT R  SAK LYE
Subjt:  -----------MKRSKNVRKTKAMAKAISKSEQSMEKFLKNQSKTTRIQSAKTLYE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCAACAAACAGCCCAAATAGATAATTCACTTCGTTCATCGTTTGACTACAGTGGGAAGCTTAAGCTTCTTGCTTTTTTCGTCTTTAGGGTTTTCGTTGTCAATCT
CCGCAGCTCTCATCTCTTAGCGATGGCGAAGAACAGGAATAAGAAGAAGGGAAGTGGGGCTGTTTCAATGGACGTAACGGAAAATACCGTTCACGAGCTCCCTCAAGCGA
TGGACGTGTCTGAGTCTTCAGTTCATAAACCAGCTTCTGGCGCTCTCAATTTAAAGTTGAAAAAGGGAAGGCCAATGAAGCGATCAAAGAACGTTAGGAAAACAAAAGCC
ATGGCTAAGGCTATTTCTAAGAGCGAGCAATCAATGGAAAAATTTTTGAAAAATCAAAGCAAAACTACCAGAATACAATCTGCAAAAACATTGTATGAATGA
mRNA sequenceShow/hide mRNA sequence
CGATTCTTGATTTGATCGAAAAATCGACTTTGATCGAGGAAGCTCACCACTACTTTATATAACTAAAGGCGGATCTAACTTTCATGGGCCAACAAACAGCCCAAATAGAT
AATTCACTTCGTTCATCGTTTGACTACAGTGGGAAGCTTAAGCTTCTTGCTTTTTTCGTCTTTAGGGTTTTCGTTGTCAATCTCCGCAGCTCTCATCTCTTAGCGATGGC
GAAGAACAGGAATAAGAAGAAGGGAAGTGGGGCTGTTTCAATGGACGTAACGGAAAATACCGTTCACGAGCTCCCTCAAGCGATGGACGTGTCTGAGTCTTCAGTTCATA
AACCAGCTTCTGGCGCTCTCAATTTAAAGTTGAAAAAGGGAAGGCCAATGAAGCGATCAAAGAACGTTAGGAAAACAAAAGCCATGGCTAAGGCTATTTCTAAGAGCGAG
CAATCAATGGAAAAATTTTTGAAAAATCAAAGCAAAACTACCAGAATACAATCTGCAAAAACATTGTATGAATGATAGTATCATTTTATAGAAATTTTCCCTTGAAAATT
GTAAAATTTATTTATTTTTGTTCTCCTCATAGGTTTTATTATACTCTCCCCACTCACCATTTAGCTTTCAATTGTATCAATCTAATCTGGCATTTATTTATTTTAGAGAG
TGGATTGTCTATTTTTATGTCTATGGTCACTAGCCTCTAACAATTAGTAATTTAAAATTATGGTGGATTTGAA
Protein sequenceShow/hide protein sequence
MGQQTAQIDNSLRSSFDYSGKLKLLAFFVFRVFVVNLRSSHLLAMAKNRNKKKGSGAVSMDVTENTVHELPQAMDVSESSVHKPASGALNLKLKKGRPMKRSKNVRKTKA
MAKAISKSEQSMEKFLKNQSKTTRIQSAKTLYE