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PI0027782 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027782
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr10:284363..285016
RNA-Seq ExpressionPI0027782
SyntenyPI0027782
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042295.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]9.7e-6762.21Show/hide
Query:  MPSCPSRPRRQEQCETQDLTQGQFKGETSIPKAQVEPESEQFVRFAQQLFQLVESVPSDVEKKYGIGRLKALGAPVFKGSIDPTNVEAWLSMLEKCFDVM
        MP    R RRQ Q   Q  TQG   GE+S    +    +EQF R  Q++ +   + PSD EK YGI RLK LGA VF+GS DP + E WL+MLEKCFDVM
Subjt:  MPSCPSRPRRQEQCETQDLTQGQFKGETSIPKAQVEPESEQFVRFAQQLFQLVESVPSDVEKKYGIGRLKALGAPVFKGSIDPTNVEAWLSMLEKCFDVM

Query:  DCPDERKVKLSTFLLQKETEGWWKFILVRCNGTRSLDWQTFRAIFEDKYYPNTYCEAKRDEFLRLEQGSPLVAEYERKYNKLSPYAEVRVASESNKCMWF
        +CP+ERKV+L+TFLLQKE EGWWK IL R +  R+LDWQTFR IFEDKYYP+TYCEAKRDEFL L+QGS  VAEYERKY KLS YA+V +A ES++C  F
Subjt:  DCPDERKVKLSTFLLQKETEGWWKFILVRCNGTRSLDWQTFRAIFEDKYYPNTYCEAKRDEFLRLEQGSPLVAEYERKYNKLSPYAEVRVASESNKCMWF

Query:  ERGSQQKIRTPATTIAK
        ERG + +IRTP TTIAK
Subjt:  ERGSQQKIRTPATTIAK

KAA0043142.1 Gag protease polyprotein-like protein [Cucumis melo var. makuwa]1.7e-6662.21Show/hide
Query:  MPSCPSRPRRQEQCETQDLTQGQFKGETSIPKAQVEPESEQFVRFAQQLFQLVESVPSDVEKKYGIGRLKALGAPVFKGSIDPTNVEAWLSMLEKCFDVM
        MP    R RRQ Q   Q  TQG   GE+S    +    +EQFVR  Q++ +   S PSD EK YGI RLK LGA VF+GS DP + E WL+MLEKCFDVM
Subjt:  MPSCPSRPRRQEQCETQDLTQGQFKGETSIPKAQVEPESEQFVRFAQQLFQLVESVPSDVEKKYGIGRLKALGAPVFKGSIDPTNVEAWLSMLEKCFDVM

Query:  DCPDERKVKLSTFLLQKETEGWWKFILVRCNGTRSLDWQTFRAIFEDKYYPNTYCEAKRDEFLRLEQGSPLVAEYERKYNKLSPYAEVRVASESNKCMWF
        +CP+ERKV+L+TFLLQKE EGWWK IL R +  R+LDWQTFR IFEDKYYP+TYCEAKRDEFL L+QGS  VAEYERKY +LS YA+V + SES++C  F
Subjt:  DCPDERKVKLSTFLLQKETEGWWKFILVRCNGTRSLDWQTFRAIFEDKYYPNTYCEAKRDEFLRLEQGSPLVAEYERKYNKLSPYAEVRVASESNKCMWF

Query:  ERGSQQKIRTPATTIAK
        ERG + +IRTP T IAK
Subjt:  ERGSQQKIRTPATTIAK

KAA0066282.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.7e-6661.75Show/hide
Query:  MPSCPSRPRRQEQCETQDLTQGQFKGETSIPKAQVEPESEQFVRFAQQLFQLVESVPSDVEKKYGIGRLKALGAPVFKGSIDPTNVEAWLSMLEKCFDVM
        MP C  R RRQ Q   Q  TQG   GE+S    +    +EQF R  Q++ +   + PSD EK YGI RLK LGA VF+GS DP + E WL+MLEKCFDVM
Subjt:  MPSCPSRPRRQEQCETQDLTQGQFKGETSIPKAQVEPESEQFVRFAQQLFQLVESVPSDVEKKYGIGRLKALGAPVFKGSIDPTNVEAWLSMLEKCFDVM

Query:  DCPDERKVKLSTFLLQKETEGWWKFILVRCNGTRSLDWQTFRAIFEDKYYPNTYCEAKRDEFLRLEQGSPLVAEYERKYNKLSPYAEVRVASESNKCMWF
        +CP+ERKV+L+TFLLQKE EGWWK IL R +  R+LDWQTFR IFEDKYYP+TYCEAKRD FL L+QGS  VAEYERKY +LS YA+V +ASES++C  F
Subjt:  DCPDERKVKLSTFLLQKETEGWWKFILVRCNGTRSLDWQTFRAIFEDKYYPNTYCEAKRDEFLRLEQGSPLVAEYERKYNKLSPYAEVRVASESNKCMWF

Query:  ERGSQQKIRTPATTIAK
        ERG   +IRTP T IAK
Subjt:  ERGSQQKIRTPATTIAK

TYK01041.1 uncharacterized protein E5676_scaffold264G00470 [Cucumis melo var. makuwa]5.1e-6862.67Show/hide
Query:  MPSCPSRPRRQEQCETQDLTQGQFKGETSIPKAQVEPESEQFVRFAQQLFQLVESVPSDVEKKYGIGRLKALGAPVFKGSIDPTNVEAWLSMLEKCFDVM
        MP   SR  +Q Q ETQD TQGQ +  +S P+ Q E  SE+F R AQ++ +     PSD EK YGI RLK LGA VF+GS DP N E WL+MLEKCFDVM
Subjt:  MPSCPSRPRRQEQCETQDLTQGQFKGETSIPKAQVEPESEQFVRFAQQLFQLVESVPSDVEKKYGIGRLKALGAPVFKGSIDPTNVEAWLSMLEKCFDVM

Query:  DCPDERKVKLSTFLLQKETEGWWKFILVRCNGTRSLDWQTFRAIFEDKYYPNTYCEAKRDEFLRLEQGSPLVAEYERKYNKLSPYAEVRVASESNKCMWF
        +CP +RKV+L+TFLLQKE EGWWK I+ R N  R+LDWQTFR IFE+KYYP TYCEAKRDEF  L+QGS  VAEYERKY +LS Y EV VA ES++C  F
Subjt:  DCPDERKVKLSTFLLQKETEGWWKFILVRCNGTRSLDWQTFRAIFEDKYYPNTYCEAKRDEFLRLEQGSPLVAEYERKYNKLSPYAEVRVASESNKCMWF

Query:  ERGSQQKIRTPATTIAK
        ERG + +IRT  T IAK
Subjt:  ERGSQQKIRTPATTIAK

XP_008448403.1 PREDICTED: uncharacterized protein LOC103490604 [Cucumis melo]5.1e-6862.67Show/hide
Query:  MPSCPSRPRRQEQCETQDLTQGQFKGETSIPKAQVEPESEQFVRFAQQLFQLVESVPSDVEKKYGIGRLKALGAPVFKGSIDPTNVEAWLSMLEKCFDVM
        MP   SR  +Q Q ETQD TQGQ +  +S P+ Q E  SE+F R AQ++ +     PSD EK YGI RLK LGA VF+GS DP N E WL+MLEKCFDVM
Subjt:  MPSCPSRPRRQEQCETQDLTQGQFKGETSIPKAQVEPESEQFVRFAQQLFQLVESVPSDVEKKYGIGRLKALGAPVFKGSIDPTNVEAWLSMLEKCFDVM

Query:  DCPDERKVKLSTFLLQKETEGWWKFILVRCNGTRSLDWQTFRAIFEDKYYPNTYCEAKRDEFLRLEQGSPLVAEYERKYNKLSPYAEVRVASESNKCMWF
        +CP +RKV+L+TFLLQKE EGWWK I+ R N  R+LDWQTFR IFE+KYYP TYCEAKRDEF  L+QGS  VAEYERKY +LS Y EV VA ES++C  F
Subjt:  DCPDERKVKLSTFLLQKETEGWWKFILVRCNGTRSLDWQTFRAIFEDKYYPNTYCEAKRDEFLRLEQGSPLVAEYERKYNKLSPYAEVRVASESNKCMWF

Query:  ERGSQQKIRTPATTIAK
        ERG + +IRT  T IAK
Subjt:  ERGSQQKIRTPATTIAK

TrEMBL top hitse value%identityAlignment
A0A1S3BJ07 uncharacterized protein LOC1034906042.5e-6862.67Show/hide
Query:  MPSCPSRPRRQEQCETQDLTQGQFKGETSIPKAQVEPESEQFVRFAQQLFQLVESVPSDVEKKYGIGRLKALGAPVFKGSIDPTNVEAWLSMLEKCFDVM
        MP   SR  +Q Q ETQD TQGQ +  +S P+ Q E  SE+F R AQ++ +     PSD EK YGI RLK LGA VF+GS DP N E WL+MLEKCFDVM
Subjt:  MPSCPSRPRRQEQCETQDLTQGQFKGETSIPKAQVEPESEQFVRFAQQLFQLVESVPSDVEKKYGIGRLKALGAPVFKGSIDPTNVEAWLSMLEKCFDVM

Query:  DCPDERKVKLSTFLLQKETEGWWKFILVRCNGTRSLDWQTFRAIFEDKYYPNTYCEAKRDEFLRLEQGSPLVAEYERKYNKLSPYAEVRVASESNKCMWF
        +CP +RKV+L+TFLLQKE EGWWK I+ R N  R+LDWQTFR IFE+KYYP TYCEAKRDEF  L+QGS  VAEYERKY +LS Y EV VA ES++C  F
Subjt:  DCPDERKVKLSTFLLQKETEGWWKFILVRCNGTRSLDWQTFRAIFEDKYYPNTYCEAKRDEFLRLEQGSPLVAEYERKYNKLSPYAEVRVASESNKCMWF

Query:  ERGSQQKIRTPATTIAK
        ERG + +IRT  T IAK
Subjt:  ERGSQQKIRTPATTIAK

A0A5A7TIK0 Gag protease polyprotein-like protein8.0e-6762.21Show/hide
Query:  MPSCPSRPRRQEQCETQDLTQGQFKGETSIPKAQVEPESEQFVRFAQQLFQLVESVPSDVEKKYGIGRLKALGAPVFKGSIDPTNVEAWLSMLEKCFDVM
        MP    R RRQ Q   Q  TQG   GE+S    +    +EQFVR  Q++ +   S PSD EK YGI RLK LGA VF+GS DP + E WL+MLEKCFDVM
Subjt:  MPSCPSRPRRQEQCETQDLTQGQFKGETSIPKAQVEPESEQFVRFAQQLFQLVESVPSDVEKKYGIGRLKALGAPVFKGSIDPTNVEAWLSMLEKCFDVM

Query:  DCPDERKVKLSTFLLQKETEGWWKFILVRCNGTRSLDWQTFRAIFEDKYYPNTYCEAKRDEFLRLEQGSPLVAEYERKYNKLSPYAEVRVASESNKCMWF
        +CP+ERKV+L+TFLLQKE EGWWK IL R +  R+LDWQTFR IFEDKYYP+TYCEAKRDEFL L+QGS  VAEYERKY +LS YA+V + SES++C  F
Subjt:  DCPDERKVKLSTFLLQKETEGWWKFILVRCNGTRSLDWQTFRAIFEDKYYPNTYCEAKRDEFLRLEQGSPLVAEYERKYNKLSPYAEVRVASESNKCMWF

Query:  ERGSQQKIRTPATTIAK
        ERG + +IRTP T IAK
Subjt:  ERGSQQKIRTPATTIAK

A0A5A7TLH7 Reverse transcriptase4.7e-6762.21Show/hide
Query:  MPSCPSRPRRQEQCETQDLTQGQFKGETSIPKAQVEPESEQFVRFAQQLFQLVESVPSDVEKKYGIGRLKALGAPVFKGSIDPTNVEAWLSMLEKCFDVM
        MP    R RRQ Q   Q  TQG   GE+S    +    +EQF R  Q++ +   + PSD EK YGI RLK LGA VF+GS DP + E WL+MLEKCFDVM
Subjt:  MPSCPSRPRRQEQCETQDLTQGQFKGETSIPKAQVEPESEQFVRFAQQLFQLVESVPSDVEKKYGIGRLKALGAPVFKGSIDPTNVEAWLSMLEKCFDVM

Query:  DCPDERKVKLSTFLLQKETEGWWKFILVRCNGTRSLDWQTFRAIFEDKYYPNTYCEAKRDEFLRLEQGSPLVAEYERKYNKLSPYAEVRVASESNKCMWF
        +CP+ERKV+L+TFLLQKE EGWWK IL R +  R+LDWQTFR IFEDKYYP+TYCEAKRDEFL L+QGS  VAEYERKY KLS YA+V +A ES++C  F
Subjt:  DCPDERKVKLSTFLLQKETEGWWKFILVRCNGTRSLDWQTFRAIFEDKYYPNTYCEAKRDEFLRLEQGSPLVAEYERKYNKLSPYAEVRVASESNKCMWF

Query:  ERGSQQKIRTPATTIAK
        ERG + +IRTP TTIAK
Subjt:  ERGSQQKIRTPATTIAK

A0A5A7VD61 Reverse transcriptase8.0e-6761.75Show/hide
Query:  MPSCPSRPRRQEQCETQDLTQGQFKGETSIPKAQVEPESEQFVRFAQQLFQLVESVPSDVEKKYGIGRLKALGAPVFKGSIDPTNVEAWLSMLEKCFDVM
        MP C  R RRQ Q   Q  TQG   GE+S    +    +EQF R  Q++ +   + PSD EK YGI RLK LGA VF+GS DP + E WL+MLEKCFDVM
Subjt:  MPSCPSRPRRQEQCETQDLTQGQFKGETSIPKAQVEPESEQFVRFAQQLFQLVESVPSDVEKKYGIGRLKALGAPVFKGSIDPTNVEAWLSMLEKCFDVM

Query:  DCPDERKVKLSTFLLQKETEGWWKFILVRCNGTRSLDWQTFRAIFEDKYYPNTYCEAKRDEFLRLEQGSPLVAEYERKYNKLSPYAEVRVASESNKCMWF
        +CP+ERKV+L+TFLLQKE EGWWK IL R +  R+LDWQTFR IFEDKYYP+TYCEAKRD FL L+QGS  VAEYERKY +LS YA+V +ASES++C  F
Subjt:  DCPDERKVKLSTFLLQKETEGWWKFILVRCNGTRSLDWQTFRAIFEDKYYPNTYCEAKRDEFLRLEQGSPLVAEYERKYNKLSPYAEVRVASESNKCMWF

Query:  ERGSQQKIRTPATTIAK
        ERG   +IRTP T IAK
Subjt:  ERGSQQKIRTPATTIAK

A0A5D3BMJ4 Retrotrans_gag domain-containing protein2.5e-6862.67Show/hide
Query:  MPSCPSRPRRQEQCETQDLTQGQFKGETSIPKAQVEPESEQFVRFAQQLFQLVESVPSDVEKKYGIGRLKALGAPVFKGSIDPTNVEAWLSMLEKCFDVM
        MP   SR  +Q Q ETQD TQGQ +  +S P+ Q E  SE+F R AQ++ +     PSD EK YGI RLK LGA VF+GS DP N E WL+MLEKCFDVM
Subjt:  MPSCPSRPRRQEQCETQDLTQGQFKGETSIPKAQVEPESEQFVRFAQQLFQLVESVPSDVEKKYGIGRLKALGAPVFKGSIDPTNVEAWLSMLEKCFDVM

Query:  DCPDERKVKLSTFLLQKETEGWWKFILVRCNGTRSLDWQTFRAIFEDKYYPNTYCEAKRDEFLRLEQGSPLVAEYERKYNKLSPYAEVRVASESNKCMWF
        +CP +RKV+L+TFLLQKE EGWWK I+ R N  R+LDWQTFR IFE+KYYP TYCEAKRDEF  L+QGS  VAEYERKY +LS Y EV VA ES++C  F
Subjt:  DCPDERKVKLSTFLLQKETEGWWKFILVRCNGTRSLDWQTFRAIFEDKYYPNTYCEAKRDEFLRLEQGSPLVAEYERKYNKLSPYAEVRVASESNKCMWF

Query:  ERGSQQKIRTPATTIAK
        ERG + +IRT  T IAK
Subjt:  ERGSQQKIRTPATTIAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTCGTGCCCTAGCAGACCACGTAGGCAGGAGCAATGCGAAACACAAGATCTTACCCAAGGGCAGTTTAAGGGAGAGACCAGTATCCCTAAGGCTCAAGTTGAGCC
AGAAAGCGAGCAGTTTGTTAGATTTGCCCAACAGTTATTCCAACTAGTAGAATCAGTGCCTAGTGATGTAGAGAAGAAGTATGGCATAGGGCGACTTAAAGCTCTAGGTG
CCCCAGTTTTCAAGGGTTCTATAGATCCGACAAATGTCGAGGCATGGCTGAGCATGTTAGAGAAGTGCTTTGATGTGATGGATTGTCCTGATGAGAGGAAGGTCAAGTTA
TCCACTTTCCTACTACAGAAAGAAACAGAAGGGTGGTGGAAGTTCATCCTAGTTAGATGCAATGGCACCAGGTCACTAGATTGGCAGACCTTCCGAGCCATATTTGAGGA
CAAGTACTATCCCAACACTTATTGTGAAGCTAAGAGGGATGAGTTTTTGAGATTAGAGCAAGGGTCACCATTAGTGGCCGAGTATGAAAGGAAGTATAACAAGCTTTCCC
CGTATGCTGAAGTTAGAGTAGCATCTGAGAGTAACAAATGTATGTGGTTTGAGAGGGGTTCACAACAGAAGATCCGTACCCCAGCTACAACAATAGCAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTTCGTGCCCTAGCAGACCACGTAGGCAGGAGCAATGCGAAACACAAGATCTTACCCAAGGGCAGTTTAAGGGAGAGACCAGTATCCCTAAGGCTCAAGTTGAGCC
AGAAAGCGAGCAGTTTGTTAGATTTGCCCAACAGTTATTCCAACTAGTAGAATCAGTGCCTAGTGATGTAGAGAAGAAGTATGGCATAGGGCGACTTAAAGCTCTAGGTG
CCCCAGTTTTCAAGGGTTCTATAGATCCGACAAATGTCGAGGCATGGCTGAGCATGTTAGAGAAGTGCTTTGATGTGATGGATTGTCCTGATGAGAGGAAGGTCAAGTTA
TCCACTTTCCTACTACAGAAAGAAACAGAAGGGTGGTGGAAGTTCATCCTAGTTAGATGCAATGGCACCAGGTCACTAGATTGGCAGACCTTCCGAGCCATATTTGAGGA
CAAGTACTATCCCAACACTTATTGTGAAGCTAAGAGGGATGAGTTTTTGAGATTAGAGCAAGGGTCACCATTAGTGGCCGAGTATGAAAGGAAGTATAACAAGCTTTCCC
CGTATGCTGAAGTTAGAGTAGCATCTGAGAGTAACAAATGTATGTGGTTTGAGAGGGGTTCACAACAGAAGATCCGTACCCCAGCTACAACAATAGCAAAATGA
Protein sequenceShow/hide protein sequence
MPSCPSRPRRQEQCETQDLTQGQFKGETSIPKAQVEPESEQFVRFAQQLFQLVESVPSDVEKKYGIGRLKALGAPVFKGSIDPTNVEAWLSMLEKCFDVMDCPDERKVKL
STFLLQKETEGWWKFILVRCNGTRSLDWQTFRAIFEDKYYPNTYCEAKRDEFLRLEQGSPLVAEYERKYNKLSPYAEVRVASESNKCMWFERGSQQKIRTPATTIAK