CuGenDBv2

Gene ID	PI0027786
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	nuclear pore complex protein NUP43
Genome location	chr05:4587728..4593341
RNA-Seq Expression	PI0027786
Synteny	PI0027786
Gene Ontology terms	GO:0031080 - nuclear pore outer ring (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR015943 - WD40/YVTN repeat-like-containing domain superfamily IPR036322 - WD40-repeat-containing domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6586038.1 Nuclear pore complex protein NUP43, partial [Cucurbita argyrosperma subsp. sororia]

7.0e-192

92.29

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSFTQNPLDIAPHSTWISPSRVSSLKTSQLHQNPLVFASTYTGSLHV
        MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAF RFAV+ALFDSDSDSSSIEIHS TQNPLD+AP S W SPSR+SSLKTSQ +QNPLVFASTYTGSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSFTQNPLDIAPHSTWISPSRVSSLKTSQLHQNPLVFASTYTGSLHV

Query:  LSVEPIEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
        LSVEP++ASLDSELSVPEK+LHD PISCVDVMDGGGECLTV+EDGRVNLVSVGESGLNYRRIFDSNGLVSY A KWASPTEF TGGCGFSLQWWDQRKPG
Subjt:  LSVEPIEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSSLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED
        GAVSQFK DWASGIVHCIDIHPSRKHTCLAGGSFGT FAWDLR QQQPIILS LEGSKTSN SPCESEVWEVHYDPYIKSGN+GGMSS+QILPAMICSED
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSSLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED

Query:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        GI+TSIEQGK+PVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
Subjt:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

XP_004144716.1 nuclear pore complex protein NUP43 [Cucumis sativus]

1.4e-200

97.14

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSFTQNPLDIAPHSTWISPSRVSSLKTSQLHQNPLVFASTYTGSLHV
        MAI SPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHS TQNPLDI PHSTWISPSRVSSLKTSQLH+NPLVFASTYTGSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSFTQNPLDIAPHSTWISPSRVSSLKTSQLHQNPLVFASTYTGSLHV

Query:  LSVEPIEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
        LSVEP+EASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRV+LVSVGESGL+YRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
Subjt:  LSVEPIEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSSLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED
        GAVSQFKA+WASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILS LEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSSLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED

Query:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        GILTSIEQGKEPVELLAEPCAINGFDI+RQHPSEVICNLEWESVAILSRP
Subjt:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

XP_008452472.1 PREDICTED: nuclear pore complex protein NUP43 [Cucumis melo]

8.2e-201

97.42

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSFTQNPLDIAPHSTWISPSRVSSLKTSQLHQNPLVFASTYTGSLHV
        MAI+SPQQQPQIHRFPQFKYVDGVRWLPPLSAF+RFAVIALFDSD DSSSIEIHS TQNPLDIAPHSTW+SPSRVSSLKTSQLHQNPLVFASTYTGSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSFTQNPLDIAPHSTWISPSRVSSLKTSQLHQNPLVFASTYTGSLHV

Query:  LSVEPIEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
        LSVEP+EASLDSELSVPEKMLHDGPISCVDVMD GGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
Subjt:  LSVEPIEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSSLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED
        GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILS LEG+KTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSSLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED

Query:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
        GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
Subjt:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR

XP_022937892.1 nuclear pore complex protein NUP43 [Cucurbita moschata]

3.1e-192

92.57

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSFTQNPLDIAPHSTWISPSRVSSLKTSQLHQNPLVFASTYTGSLHV
        MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAF RFAV+ALFDSDSDSSSIEIHS TQNPLD+AP S W SPSR+SSLKTSQ +QNPLVFASTYTGSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSFTQNPLDIAPHSTWISPSRVSSLKTSQLHQNPLVFASTYTGSLHV

Query:  LSVEPIEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
        LSVEP++ASLDSELSVPEK+LHD PISCVDVMDGGGECLTV+EDGRVNLVSVGESGLNYRRIFDSNGLVSY A KWASPTEF TGGCGFSLQWWDQRKPG
Subjt:  LSVEPIEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSSLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED
        GAVSQFK DWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLR QQQPIILS LEGSKTSN SPCESEVWEVHYDPYIKSGN+GGMSS+QILPAMICSED
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSSLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED

Query:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        GI+TSIEQGK+PVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
Subjt:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

XP_038889924.1 nuclear pore complex protein NUP43 [Benincasa hispida]

7.0e-192

93.7

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSFTQNPLDIAPHSTWISPSRVSSLKTSQLHQNPLVFASTYTGSLHV
        MAIVSPQQQPQIHRFPQFKYVDGVRWL  LS FSR AVIALFDSDSDSSSIEIHS TQ PLDIAPHSTW SPSRVSSLKTSQL+QNPLVFASTYTGSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSFTQNPLDIAPHSTWISPSRVSSLKTSQLHQNPLVFASTYTGSLHV

Query:  LSVEPIEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
        LSVEP+EA+LDSELSVPEKMLHD PISCVDVMDGGGECLTVSEDGRVNLVS+GESGLNY RIFDSNGLVSY AVKWASPTEF TGGCGFSLQWWDQRKPG
Subjt:  LSVEPIEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSSLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED
        GAVSQFKADWASGIVH IDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILS LEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSS+QILPAMICSED
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSSLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED

Query:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
        GILTSIEQGK+PV+LLAEPCAINGFDIDR HPSEVICNLEWES+AILSR
Subjt:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJ46 Uncharacterized protein

6.8e-201

97.14

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSFTQNPLDIAPHSTWISPSRVSSLKTSQLHQNPLVFASTYTGSLHV
        MAI SPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHS TQNPLDI PHSTWISPSRVSSLKTSQLH+NPLVFASTYTGSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSFTQNPLDIAPHSTWISPSRVSSLKTSQLHQNPLVFASTYTGSLHV

Query:  LSVEPIEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
        LSVEP+EASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRV+LVSVGESGL+YRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
Subjt:  LSVEPIEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSSLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED
        GAVSQFKA+WASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILS LEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSSLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED

Query:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        GILTSIEQGKEPVELLAEPCAINGFDI+RQHPSEVICNLEWESVAILSRP
Subjt:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

A0A1S3BTA6 nuclear pore complex protein NUP43

4.0e-201

97.42

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSFTQNPLDIAPHSTWISPSRVSSLKTSQLHQNPLVFASTYTGSLHV
        MAI+SPQQQPQIHRFPQFKYVDGVRWLPPLSAF+RFAVIALFDSD DSSSIEIHS TQNPLDIAPHSTW+SPSRVSSLKTSQLHQNPLVFASTYTGSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSFTQNPLDIAPHSTWISPSRVSSLKTSQLHQNPLVFASTYTGSLHV

Query:  LSVEPIEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
        LSVEP+EASLDSELSVPEKMLHDGPISCVDVMD GGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
Subjt:  LSVEPIEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSSLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED
        GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILS LEG+KTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSSLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED

Query:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
        GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
Subjt:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR

A0A5D3BAS9 Nuclear pore complex protein NUP43

4.0e-201

97.42

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSFTQNPLDIAPHSTWISPSRVSSLKTSQLHQNPLVFASTYTGSLHV
        MAI+SPQQQPQIHRFPQFKYVDGVRWLPPLSAF+RFAVIALFDSD DSSSIEIHS TQNPLDIAPHSTW+SPSRVSSLKTSQLHQNPLVFASTYTGSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSFTQNPLDIAPHSTWISPSRVSSLKTSQLHQNPLVFASTYTGSLHV

Query:  LSVEPIEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
        LSVEP+EASLDSELSVPEKMLHDGPISCVDVMD GGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
Subjt:  LSVEPIEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSSLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED
        GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILS LEG+KTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSSLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED

Query:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
        GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
Subjt:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR

A0A6J1FCG9 nuclear pore complex protein NUP43

1.5e-192

92.57

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSFTQNPLDIAPHSTWISPSRVSSLKTSQLHQNPLVFASTYTGSLHV
        MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAF RFAV+ALFDSDSDSSSIEIHS TQNPLD+AP S W SPSR+SSLKTSQ +QNPLVFASTYTGSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSFTQNPLDIAPHSTWISPSRVSSLKTSQLHQNPLVFASTYTGSLHV

Query:  LSVEPIEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
        LSVEP++ASLDSELSVPEK+LHD PISCVDVMDGGGECLTV+EDGRVNLVSVGESGLNYRRIFDSNGLVSY A KWASPTEF TGGCGFSLQWWDQRKPG
Subjt:  LSVEPIEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSSLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED
        GAVSQFK DWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLR QQQPIILS LEGSKTSN SPCESEVWEVHYDPYIKSGN+GGMSS+QILPAMICSED
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSSLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED

Query:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        GI+TSIEQGK+PVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
Subjt:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

A0A6J1HYH3 nuclear pore complex protein NUP43

1.6e-189

90.86

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSFTQNPLDIAPHSTWISPSRVSSLKTSQLHQNPLVFASTYTGSLHV
        MAIVSPQQQPQIHRFPQFKY+DGVRWLPPLSAF RFAV+ALFDSDSDSSSIEIHS TQNPLD+AP S W SPSR+SSLKTSQ +QNPLVFASTYTGSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSFTQNPLDIAPHSTWISPSRVSSLKTSQLHQNPLVFASTYTGSLHV

Query:  LSVEPIEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
        LSVEP++ASLDSELSVPEK+LHD PISCVDVMD GGECLTV+EDGRVNLVSVGESGLNYRRIFDSNGLVSY A KWASPTEF TGGCGFSLQWWDQRKPG
Subjt:  LSVEPIEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSSLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED
        GAV QFK DWASGIVHC+DIHPSRKHTCLAGGSFGTVFAWDLR QQQPIILS LEGSKTSN SPCESEVWEV YDPYIKSGN+GGMSS+QILPAMICSED
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSSLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED

Query:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        GI+TSIEQGK+PVELLAEPCAINGFDID QHPSEVICNLEWESVAILSRP
Subjt:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

SwissProt top hits

e value

%identity

Alignment

Q24JJ9 Nuclear pore complex protein NUP43

5.3e-110

58.56

Show/hide

Query:  QQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSFTQNPLD-------IAPHSTWISPSRVSSLKTSQL-----HQNPLVFASTY
        Q   Q+HR PQ KYVDGVRWLP  SA +RF   A +D+D DSSSIEI S   NP         I   S+W SPSRVSSL+ +          P+V A+T 
Subjt:  QQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSFTQNPLD-------IAPHSTWISPSRVSSLKTSQL-----HQNPLVFASTY

Query:  TGSLHVLSVEPIEASLDSELSVPE-KMLHDGPISCVDVMDGGGECLTVSEDGRVNLVS-VGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQ
        +GSLHVL ++ +E +   E    E +  H G +  VD  + GGEC+TV EDGRVN+V  V   GL YR++FD NGLV+Y AVKWASPTEFVTGG GF LQ
Subjt:  TGSLHVLSVEPIEASLDSELSVPE-KMLHDGPISCVDVMDGGGECLTVSEDGRVNLVS-VGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQ

Query:  WWDQRKPGGAVSQFKADW----ASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSSLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSS
         WDQRK G AVSQ K +W     S IVH IDIHPSRKHTC+AGGS GTVFAWDLR  QQPI+LS +  S+  N    ESEVWEV YD Y KS     +SS
Subjt:  WWDQRKPGGAVSQFKADW----ASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSSLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSS

Query:  TQILPAMICSEDGILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        ++ILP M CSEDGIL  IEQG+EP+ELLAEPCAIN FDIDRQ+P +VIC+LEWES+A+ SRP
Subjt:  TQILPAMICSEDGILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

Arabidopsis top hits

e value

%identity

Alignment

AT4G30840.1 Transducin/WD40 repeat-like superfamily protein

3.8e-111

58.56

Show/hide

Query:  QQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSFTQNPLD-------IAPHSTWISPSRVSSLKTSQL-----HQNPLVFASTY
        Q   Q+HR PQ KYVDGVRWLP  SA +RF   A +D+D DSSSIEI S   NP         I   S+W SPSRVSSL+ +          P+V A+T 
Subjt:  QQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSFTQNPLD-------IAPHSTWISPSRVSSLKTSQL-----HQNPLVFASTY

Query:  TGSLHVLSVEPIEASLDSELSVPE-KMLHDGPISCVDVMDGGGECLTVSEDGRVNLVS-VGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQ
        +GSLHVL ++ +E +   E    E +  H G +  VD  + GGEC+TV EDGRVN+V  V   GL YR++FD NGLV+Y AVKWASPTEFVTGG GF LQ
Subjt:  TGSLHVLSVEPIEASLDSELSVPE-KMLHDGPISCVDVMDGGGECLTVSEDGRVNLVS-VGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQ

Query:  WWDQRKPGGAVSQFKADW----ASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSSLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSS
         WDQRK G AVSQ K +W     S IVH IDIHPSRKHTC+AGGS GTVFAWDLR  QQPI+LS +  S+  N    ESEVWEV YD Y KS     +SS
Subjt:  WWDQRKPGGAVSQFKADW----ASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSSLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSS

Query:  TQILPAMICSEDGILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        ++ILP M CSEDGIL  IEQG+EP+ELLAEPCAIN FDIDRQ+P +VIC+LEWES+A+ SRP
Subjt:  TQILPAMICSEDGILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

Sequences

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CDS sequence

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ATGGCGATCGTTAGTCCCCAACAGCAACCTCAAATCCACAGGTTCCCGCAATTCAAGTATGTTGATGGTGTTCGTTGGCTTCCACCACTTTCCGCATTTAGCCGGTTTGC
CGTCATTGCTCTTTTCGACTCTGATTCCGATTCATCCTCCATTGAAATTCACTCCTTTACTCAAAATCCACTGGATATAGCTCCTCATTCGACATGGATATCACCTTCAA
GAGTATCTTCACTTAAAACCTCTCAACTCCACCAAAACCCTCTTGTTTTCGCTTCGACTTATACAGGTTCTCTTCATGTTTTATCTGTCGAGCCAATAGAAGCGTCGCTC
GACTCGGAGCTTTCGGTGCCGGAGAAGATGTTGCACGACGGACCTATTTCATGTGTCGATGTGATGGATGGGGGAGGTGAATGCCTGACTGTTTCGGAAGATGGACGGGT
GAATTTGGTGAGCGTTGGGGAATCTGGGTTGAATTATCGTCGGATATTTGACAGTAATGGGTTGGTGTCGTATAACGCGGTGAAATGGGCATCGCCTACTGAGTTTGTCA
CTGGTGGTTGTGGGTTTAGCTTGCAATGGTGGGATCAGAGGAAGCCCGGTGGAGCAGTTTCTCAGTTTAAGGCCGATTGGGCATCTGGTATAGTTCACTGCATTGATATC
CATCCATCGCGAAAGCATACTTGTTTGGCAGGGGGCTCTTTTGGTACTGTCTTTGCCTGGGATTTGAGGTCACAACAGCAGCCTATCATTCTTTCGAGTCTAGAAGGGAG
CAAAACATCAAATCCTTCGCCATGTGAAAGTGAGGTTTGGGAGGTTCACTATGATCCTTATATTAAGTCTGGCAATCTAGGTGGCATGTCATCTACACAGATTTTACCTG
CTATGATCTGCTCTGAGGACGGGATTCTAACTAGTATTGAGCAAGGCAAGGAGCCTGTGGAACTGCTGGCAGAACCATGTGCAATTAATGGTTTTGACATTGACCGTCAA
CATCCATCAGAAGTGATATGTAACTTGGAGTGGGAATCCGTTGCCATCCTGTCAAGACCTTGA

mRNA sequence

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GGCGTCTCAAAAAGTTAAATTCCGACGTCATTCTTATTTCTCAATCTTCGTTGAAAGTGAAACCAAGCTCCCTTAACCCTAACAATGGCGATCGTTAGTCCCCAACAGCA
ACCTCAAATCCACAGGTTCCCGCAATTCAAGTATGTTGATGGTGTTCGTTGGCTTCCACCACTTTCCGCATTTAGCCGGTTTGCCGTCATTGCTCTTTTCGACTCTGATT
CCGATTCATCCTCCATTGAAATTCACTCCTTTACTCAAAATCCACTGGATATAGCTCCTCATTCGACATGGATATCACCTTCAAGAGTATCTTCACTTAAAACCTCTCAA
CTCCACCAAAACCCTCTTGTTTTCGCTTCGACTTATACAGGTTCTCTTCATGTTTTATCTGTCGAGCCAATAGAAGCGTCGCTCGACTCGGAGCTTTCGGTGCCGGAGAA
GATGTTGCACGACGGACCTATTTCATGTGTCGATGTGATGGATGGGGGAGGTGAATGCCTGACTGTTTCGGAAGATGGACGGGTGAATTTGGTGAGCGTTGGGGAATCTG
GGTTGAATTATCGTCGGATATTTGACAGTAATGGGTTGGTGTCGTATAACGCGGTGAAATGGGCATCGCCTACTGAGTTTGTCACTGGTGGTTGTGGGTTTAGCTTGCAA
TGGTGGGATCAGAGGAAGCCCGGTGGAGCAGTTTCTCAGTTTAAGGCCGATTGGGCATCTGGTATAGTTCACTGCATTGATATCCATCCATCGCGAAAGCATACTTGTTT
GGCAGGGGGCTCTTTTGGTACTGTCTTTGCCTGGGATTTGAGGTCACAACAGCAGCCTATCATTCTTTCGAGTCTAGAAGGGAGCAAAACATCAAATCCTTCGCCATGTG
AAAGTGAGGTTTGGGAGGTTCACTATGATCCTTATATTAAGTCTGGCAATCTAGGTGGCATGTCATCTACACAGATTTTACCTGCTATGATCTGCTCTGAGGACGGGATT
CTAACTAGTATTGAGCAAGGCAAGGAGCCTGTGGAACTGCTGGCAGAACCATGTGCAATTAATGGTTTTGACATTGACCGTCAACATCCATCAGAAGTGATATGTAACTT
GGAGTGGGAATCCGTTGCCATCCTGTCAAGACCTTGATTTTCAGAATCAGAAGTCATCGTTTTTCCTAAATTAGCAGGTCCCAATCCACTATATCAATTCCTTTAACGAT
TTAAGGAGTATCCTTAGCTTTTATCTCTCATTGAGTGCATGGAATTTCTTAGTTTTAGGCTCATGTAAATTTGGCTGTAGCTTTGTTTGTTTACCACATAATTGGAACTC
AATTTTGATATGAATTTTCATACTGGTCAGAGACCATAATAGGGGGATATTTATGATGTTATTTTGCTTTGTATTTTATATGTATTTAACCTGTTCTTCATTCAACTCCT
CAGTTTGACGCTTTCACTTTTAATTTTTTATACCAAATAGAATAACTTTTTTT

Protein sequence

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MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSFTQNPLDIAPHSTWISPSRVSSLKTSQLHQNPLVFASTYTGSLHVLSVEPIEASL
DSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPGGAVSQFKADWASGIVHCIDI
HPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSSLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSEDGILTSIEQGKEPVELLAEPCAINGFDIDRQ
HPSEVICNLEWESVAILSRP

PI0027786 (gene) of Melon (PI 482460) v1 genome