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PI0027787 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027787
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr01:13790568..13790864
RNA-Seq ExpressionPI0027787
SyntenyPI0027787
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064129.1 uncharacterized protein E6C27_scaffold548G00430 [Cucumis melo var. makuwa]6.0e-0840.91Show/hide
Query:  RSELKELSANNVQLSTAVSNLTFLVIVQSEIMRQIAAWHDRQFRMQMEYTYATIVQRMPAPIILPELKAPFPPL--TRLGDPAPRQDN
        + ++ ++ AN  QLS+ VSNLT +VI+  E+  ++    D+QF+  +EYT+A   QRMP+P I PE+++ +P +    LG P P QDN
Subjt:  RSELKELSANNVQLSTAVSNLTFLVIVQSEIMRQIAAWHDRQFRMQMEYTYATIVQRMPAPIILPELKAPFPPL--TRLGDPAPRQDN
TYK28611.1 hypothetical protein E5676_scaffold2030G00280 [Cucumis melo var. makuwa]6.0e-0840.91Show/hide
Query:  RSELKELSANNVQLSTAVSNLTFLVIVQSEIMRQIAAWHDRQFRMQMEYTYATIVQRMPAPIILPELKAPFPPL--TRLGDPAPRQDN
        + ++ ++ AN  QLS+ VSNLT +VI+  E+  ++    D+QF+  +EYT+A   QRMP+P I PE+++ +P +    LG P P QDN
Subjt:  RSELKELSANNVQLSTAVSNLTFLVIVQSEIMRQIAAWHDRQFRMQMEYTYATIVQRMPAPIILPELKAPFPPL--TRLGDPAPRQDN
TrEMBL top hitse value%identityAlignment
A0A5A7UH00 Uncharacterized protein7.4e-0452.08Show/hide
Query:  DRQFRMQMEYTYATIVQRMPAPIILPELKAPFPPLTRL-GDPAPRQDN
        DR+F+  MEYT+A  VQR+P P+I  EL+ PFPP+ +  G P PRQ++
Subjt:  DRQFRMQMEYTYATIVQRMPAPIILPELKAPFPPLTRL-GDPAPRQDN
A0A5A7VF20 Uncharacterized protein2.9e-0840.91Show/hide
Query:  RSELKELSANNVQLSTAVSNLTFLVIVQSEIMRQIAAWHDRQFRMQMEYTYATIVQRMPAPIILPELKAPFPPL--TRLGDPAPRQDN
        + ++ ++ AN  QLS+ VSNLT +VI+  E+  ++    D+QF+  +EYT+A   QRMP+P I PE+++ +P +    LG P P QDN
Subjt:  RSELKELSANNVQLSTAVSNLTFLVIVQSEIMRQIAAWHDRQFRMQMEYTYATIVQRMPAPIILPELKAPFPPL--TRLGDPAPRQDN
A0A5D3CKB6 Retrovirus-related Pol polyprotein from transposon 17.65.7e-0437.21Show/hide
Query:  VSTLRSELKELSANNVQLSTAVSNLTFLVIVQSEIMRQIAAWHDRQFRMQMEYTYATIVQRMPAPIILPELKAPFPPLTRLGDPAP
        + ++ + LKE+   N+ +   +++L       +  +  IA  HDRQF  QMEYT+A  VQ +  P+I+PEL AP PP+ +L +P P
Subjt:  VSTLRSELKELSANNVQLSTAVSNLTFLVIVQSEIMRQIAAWHDRQFRMQMEYTYATIVQRMPAPIILPELKAPFPPLTRLGDPAP
A0A5D3DYE2 Uncharacterized protein2.9e-0840.91Show/hide
Query:  RSELKELSANNVQLSTAVSNLTFLVIVQSEIMRQIAAWHDRQFRMQMEYTYATIVQRMPAPIILPELKAPFPPL--TRLGDPAPRQDN
        + ++ ++ AN  QLS+ VSNLT +VI+  E+  ++    D+QF+  +EYT+A   QRMP+P I PE+++ +P +    LG P P QDN
Subjt:  RSELKELSANNVQLSTAVSNLTFLVIVQSEIMRQIAAWHDRQFRMQMEYTYATIVQRMPAPIILPELKAPFPPL--TRLGDPAPRQDN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGCCCGCCTCTCAAGAAGAAGTCAGTACCCTGAGAAGCGAGTTGAAGGAACTTTCGGCGAACAACGTCCAGCTCTCCACCGCTGTATCCAACCTCACTTTCCTGGT
CATCGTGCAATCCGAAATCATGCGGCAAATAGCTGCATGGCATGATCGGCAGTTTCGCATGCAAATGGAATATACTTACGCAACCATTGTTCAACGCATGCCTGCACCAA
TCATCCTACCAGAGCTCAAAGCACCATTTCCACCACTCACGCGTCTTGGCGACCCTGCTCCCCGCCAAGATAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGCCCGCCTCTCAAGAAGAAGTCAGTACCCTGAGAAGCGAGTTGAAGGAACTTTCGGCGAACAACGTCCAGCTCTCCACCGCTGTATCCAACCTCACTTTCCTGGT
CATCGTGCAATCCGAAATCATGCGGCAAATAGCTGCATGGCATGATCGGCAGTTTCGCATGCAAATGGAATATACTTACGCAACCATTGTTCAACGCATGCCTGCACCAA
TCATCCTACCAGAGCTCAAAGCACCATTTCCACCACTCACGCGTCTTGGCGACCCTGCTCCCCGCCAAGATAACTAA
Protein sequenceShow/hide protein sequence
MTPASQEEVSTLRSELKELSANNVQLSTAVSNLTFLVIVQSEIMRQIAAWHDRQFRMQMEYTYATIVQRMPAPIILPELKAPFPPLTRLGDPAPRQDN