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PI0027812 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027812
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr07:6929861..6930352
RNA-Seq ExpressionPI0027812
SyntenyPI0027812
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036574.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]6.4e-3179.31Show/hide
Query:  MGLRPEYESVRAALLHRNPLPSLDTAVQEILFEEKILGISSSMHSDTALATTHSRPTNEVTFCKYCKLQEHKIANCPIIKCRYCHKQ
        MGLRPEYE VRAALLHRNPLPSLD AVQEILFEEK LGI SS+HSD ALATTH R  NE  FCK CKL  HK ANCP I+CRYCHK+
Subjt:  MGLRPEYESVRAALLHRNPLPSLDTAVQEILFEEKILGISSSMHSDTALATTHSRPTNEVTFCKYCKLQEHKIANCPIIKCRYCHKQ
KAA0041166.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.7e-3180.46Show/hide
Query:  MGLRPEYESVRAALLHRNPLPSLDTAVQEILFEEKILGISSSMHSDTALATTHSRPTNEVTFCKYCKLQEHKIANCPIIKCRYCHKQ
        MGLRPEYESVRAALLHRNPLPSLD AVQEILFEEK LGI SS+HSD ALATTH R  NE  FCK CKL  HK ANCP I+CRYCHK+
Subjt:  MGLRPEYESVRAALLHRNPLPSLDTAVQEILFEEKILGISSSMHSDTALATTHSRPTNEVTFCKYCKLQEHKIANCPIIKCRYCHKQ
KAA0043149.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.7e-3180.46Show/hide
Query:  MGLRPEYESVRAALLHRNPLPSLDTAVQEILFEEKILGISSSMHSDTALATTHSRPTNEVTFCKYCKLQEHKIANCPIIKCRYCHKQ
        MGLRPEYESVRAALLHRNPLPSLD AVQEILFEEK LGI SS+HSD ALATTH R  NE  FCK CKL  HK ANCP I+CRYCHK+
Subjt:  MGLRPEYESVRAALLHRNPLPSLDTAVQEILFEEKILGISSSMHSDTALATTHSRPTNEVTFCKYCKLQEHKIANCPIIKCRYCHKQ
KAA0065380.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.7e-3180.46Show/hide
Query:  MGLRPEYESVRAALLHRNPLPSLDTAVQEILFEEKILGISSSMHSDTALATTHSRPTNEVTFCKYCKLQEHKIANCPIIKCRYCHKQ
        MGLRPEYESVRAALLHRNPLPSLD AVQEILFEEK LGI SS+HSD ALATTH R  NE  FCK CKL  HK ANCP I+CRYCHK+
Subjt:  MGLRPEYESVRAALLHRNPLPSLDTAVQEILFEEKILGISSSMHSDTALATTHSRPTNEVTFCKYCKLQEHKIANCPIIKCRYCHKQ
XP_008445037.1 PREDICTED: uncharacterized protein LOC103488200 [Cucumis melo]1.7e-3180.46Show/hide
Query:  MGLRPEYESVRAALLHRNPLPSLDTAVQEILFEEKILGISSSMHSDTALATTHSRPTNEVTFCKYCKLQEHKIANCPIIKCRYCHKQ
        MGLRPEYESVRAALLHRNPLPSLD AVQEILFEEK LGI SS+HSD ALATTH R  NE  FCK CKL  HK ANCP I+CRYCHK+
Subjt:  MGLRPEYESVRAALLHRNPLPSLDTAVQEILFEEKILGISSSMHSDTALATTHSRPTNEVTFCKYCKLQEHKIANCPIIKCRYCHKQ
TrEMBL top hitse value%identityAlignment
A0A1S3BBA1 uncharacterized protein LOC1034882008.2e-3280.46Show/hide
Query:  MGLRPEYESVRAALLHRNPLPSLDTAVQEILFEEKILGISSSMHSDTALATTHSRPTNEVTFCKYCKLQEHKIANCPIIKCRYCHKQ
        MGLRPEYESVRAALLHRNPLPSLD AVQEILFEEK LGI SS+HSD ALATTH R  NE  FCK CKL  HK ANCP I+CRYCHK+
Subjt:  MGLRPEYESVRAALLHRNPLPSLDTAVQEILFEEKILGISSSMHSDTALATTHSRPTNEVTFCKYCKLQEHKIANCPIIKCRYCHKQ
A0A5A7SZ66 Retrovirus-related Pol polyprotein from transposon TNT 1-943.1e-3179.31Show/hide
Query:  MGLRPEYESVRAALLHRNPLPSLDTAVQEILFEEKILGISSSMHSDTALATTHSRPTNEVTFCKYCKLQEHKIANCPIIKCRYCHKQ
        MGLRPEYE VRAALLHRNPLPSLD AVQEILFEEK LGI SS+HSD ALATTH R  NE  FCK CKL  HK ANCP I+CRYCHK+
Subjt:  MGLRPEYESVRAALLHRNPLPSLDTAVQEILFEEKILGISSSMHSDTALATTHSRPTNEVTFCKYCKLQEHKIANCPIIKCRYCHKQ
A0A5A7TGJ6 Putative mitochondrial protein8.2e-3280.46Show/hide
Query:  MGLRPEYESVRAALLHRNPLPSLDTAVQEILFEEKILGISSSMHSDTALATTHSRPTNEVTFCKYCKLQEHKIANCPIIKCRYCHKQ
        MGLRPEYESVRAALLHRNPLPSLD AVQEILFEEK LGI SS+HSD ALATTH R  NE  FCK CKL  HK ANCP I+CRYCHK+
Subjt:  MGLRPEYESVRAALLHRNPLPSLDTAVQEILFEEKILGISSSMHSDTALATTHSRPTNEVTFCKYCKLQEHKIANCPIIKCRYCHKQ
A0A5A7VDW0 Retrovirus-related Pol polyprotein from transposon TNT 1-948.2e-3280.46Show/hide
Query:  MGLRPEYESVRAALLHRNPLPSLDTAVQEILFEEKILGISSSMHSDTALATTHSRPTNEVTFCKYCKLQEHKIANCPIIKCRYCHKQ
        MGLRPEYESVRAALLHRNPLPSLD AVQEILFEEK LGI SS+HSD ALATTH R  NE  FCK CKL  HK ANCP I+CRYCHK+
Subjt:  MGLRPEYESVRAALLHRNPLPSLDTAVQEILFEEKILGISSSMHSDTALATTHSRPTNEVTFCKYCKLQEHKIANCPIIKCRYCHKQ
A0A5D3DG18 Retrovirus-related Pol polyprotein from transposon TNT 1-948.2e-3280.46Show/hide
Query:  MGLRPEYESVRAALLHRNPLPSLDTAVQEILFEEKILGISSSMHSDTALATTHSRPTNEVTFCKYCKLQEHKIANCPIIKCRYCHKQ
        MGLRPEYESVRAALLHRNPLPSLD AVQEILFEEK LGI SS+HSD ALATTH R  NE  FCK CKL  HK ANCP I+CRYCHK+
Subjt:  MGLRPEYESVRAALLHRNPLPSLDTAVQEILFEEKILGISSSMHSDTALATTHSRPTNEVTFCKYCKLQEHKIANCPIIKCRYCHKQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACTCCGTCCAGAGTATGAATCTGTTCGGGCTGCCCTCTTACACCGCAACCCTCTACCATCTCTTGACACCGCCGTTCAGGAAATCCTATTTGAGGAGAAAATACT
TGGCATTAGCTCCTCTATGCACTCTGATACTGCCCTTGCAACCACTCATTCACGGCCTACTAATGAGGTCACCTTCTGCAAATATTGTAAACTCCAGGAACACAAGATTG
CTAATTGTCCTATCATTAAGTGTAGGTACTGTCACAAGCAAGTCACATCTTGGAAATCTGTCCAACTCGTCCACCGCGCCCTCCTGGTCACTCACACAAACCCAAGTCCT
CACCTAATTTGGGTTCCTCATCTGTGGTTGTTGCTGCCACCTCACCTGACACTACACCATCTCCAAGCTTTCAGTTACATGACCTCCTTACTTACTGAAACAAGTGATCT
CTTCCAACTCTACTGCCCTTGTTGCCACATCAGGTACTTCCTGGCTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGACTCCGTCCAGAGTATGAATCTGTTCGGGCTGCCCTCTTACACCGCAACCCTCTACCATCTCTTGACACCGCCGTTCAGGAAATCCTATTTGAGGAGAAAATACT
TGGCATTAGCTCCTCTATGCACTCTGATACTGCCCTTGCAACCACTCATTCACGGCCTACTAATGAGGTCACCTTCTGCAAATATTGTAAACTCCAGGAACACAAGATTG
CTAATTGTCCTATCATTAAGTGTAGGTACTGTCACAAGCAAGTCACATCTTGGAAATCTGTCCAACTCGTCCACCGCGCCCTCCTGGTCACTCACACAAACCCAAGTCCT
CACCTAATTTGGGTTCCTCATCTGTGGTTGTTGCTGCCACCTCACCTGACACTACACCATCTCCAAGCTTTCAGTTACATGACCTCCTTACTTACTGAAACAAGTGATCT
CTTCCAACTCTACTGCCCTTGTTGCCACATCAGGTACTTCCTGGCTCCTTGA
Protein sequenceShow/hide protein sequence
MGLRPEYESVRAALLHRNPLPSLDTAVQEILFEEKILGISSSMHSDTALATTHSRPTNEVTFCKYCKLQEHKIANCPIIKCRYCHKQVTSWKSVQLVHRALLVTHTNPSP
HLIWVPHLWLLLPPHLTLHHLQAFSYMTSLLTETSDLFQLYCPCCHIRYFLAP