CuGenDBv2

Gene ID	PI0027828
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein
Genome location	chr05:1522370..1527460
RNA-Seq Expression	PI0027828
Synteny	PI0027828
Gene Ontology terms	NA
InterPro domains	IPR019188 - Small nuclear RNA activating complex (SNAPc), subunit SNAP43

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0063525.1 putative mediator of RNA polymerase II transcription subunit 26 isoform X1 [Cucumis melo var. makuwa]

6.6e-148

96.13

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMLSTASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSF DMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHM S ASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMLSTASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVVDAKENNVKVVSSVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNMLKKMSTDYSEA
        ELKKLKELVVDAKENNVKVVS VVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSN+L KMSTDYSEA
Subjt:  ELKKLKELVVDAKENNVKVVSSVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNMLKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDEKLIGDTVEKIAEDSNVQRGVFYEQTGLDQQLFPVEAEQQILEDHTDVNFDKELERMLTDV
        KKLALYEAS+IVDVQDIKHIAEDEKLIGDTVEKIAED NVQRGVFYEQTGLDQQL PVEA+QQ+LEDHTDVNFDKELERMLTDV
Subjt:  KKLALYEASEIVDVQDIKHIAEDEKLIGDTVEKIAEDSNVQRGVFYEQTGLDQQLFPVEAEQQILEDHTDVNFDKELERMLTDV

KAE8651536.1 hypothetical protein Csa_019424 [Cucumis sativus]

5.6e-147

95.77

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMLSTASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMLSTASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMLSTASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVVDAKENNVKVVSSVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNMLKKMSTDYSEA
        ELKKLKELVVDAKENNVKVVS VVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAY KLFNDTPI NYIHMDLGMEVGSN+L KMSTDYSEA
Subjt:  ELKKLKELVVDAKENNVKVVSSVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNMLKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDEKLIGDTVEKIAEDSNVQRGVFYEQTGLDQQLFPVEAEQQILEDHTDVNFDKELERMLTDV
        KKLALYEAS+IVDVQDIKHIAEDEKLIGDTVEKIAED NVQRGVFYEQTGLDQQ  PVEA+QQ+LEDH DVNFDKELERMLTDV
Subjt:  KKLALYEASEIVDVQDIKHIAEDEKLIGDTVEKIAEDSNVQRGVFYEQTGLDQQLFPVEAEQQILEDHTDVNFDKELERMLTDV

XP_008457139.1 PREDICTED: uncharacterized protein LOC103496883 isoform X1 [Cucumis melo]

3.3e-147

95.42

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMLSTASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSF DMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHM S ASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMLSTASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVVDAKENNVKVVSSVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNMLKKMSTDYSEA
        ELKKLKELV+DAKENNVKVVS VVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSN+L KMSTDYSEA
Subjt:  ELKKLKELVVDAKENNVKVVSSVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNMLKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDEKLIGDTVEKIAEDSNVQRGVFYEQTGLDQQLFPVEAEQQILEDHTDVNFDKELERMLTDV
        KKLALYEAS+IVDVQDIKHIAEDEKLIGDTVEKIAED NVQRGVFYEQTGLDQQL PVEA+QQ+LEDHTDV+FDKELERMLTDV
Subjt:  KKLALYEASEIVDVQDIKHIAEDEKLIGDTVEKIAEDSNVQRGVFYEQTGLDQQLFPVEAEQQILEDHTDVNFDKELERMLTDV

XP_008457155.1 PREDICTED: uncharacterized protein LOC103496883 isoform X2 [Cucumis melo]

2.3e-145

95.07

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMLSTASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSF DMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHM S ASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMLSTASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVVDAKENNVKVVSSVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNMLKKMSTDYSEA
        ELKKLKELV+DAKENNVKVVS VVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSN+L KMSTDYSEA
Subjt:  ELKKLKELVVDAKENNVKVVSSVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNMLKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDEKLIGDTVEKIAEDSNVQRGVFYEQTGLDQQLFPVEAEQQILEDHTDVNFDKELERMLTDV
        KKLALY AS+IVDVQDIKHIAEDEKLIGDTVEKIAED NVQRGVFYEQTGLDQQL PVEA+QQ+LEDHTDV+FDKELERMLTDV
Subjt:  KKLALYEASEIVDVQDIKHIAEDEKLIGDTVEKIAEDSNVQRGVFYEQTGLDQQLFPVEAEQQILEDHTDVNFDKELERMLTDV

XP_031737111.1 uncharacterized protein LOC101216308 isoform X1 [Cucumis sativus]

5.6e-147

95.77

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMLSTASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMLSTASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMLSTASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVVDAKENNVKVVSSVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNMLKKMSTDYSEA
        ELKKLKELVVDAKENNVKVVS VVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAY KLFNDTPI NYIHMDLGMEVGSN+L KMSTDYSEA
Subjt:  ELKKLKELVVDAKENNVKVVSSVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNMLKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDEKLIGDTVEKIAEDSNVQRGVFYEQTGLDQQLFPVEAEQQILEDHTDVNFDKELERMLTDV
        KKLALYEAS+IVDVQDIKHIAEDEKLIGDTVEKIAED NVQRGVFYEQTGLDQQ  PVEA+QQ+LEDH DVNFDKELERMLTDV
Subjt:  KKLALYEASEIVDVQDIKHIAEDEKLIGDTVEKIAEDSNVQRGVFYEQTGLDQQLFPVEAEQQILEDHTDVNFDKELERMLTDV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LL25 Uncharacterized protein

2.7e-147

95.77

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMLSTASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMLSTASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMLSTASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVVDAKENNVKVVSSVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNMLKKMSTDYSEA
        ELKKLKELVVDAKENNVKVVS VVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAY KLFNDTPI NYIHMDLGMEVGSN+L KMSTDYSEA
Subjt:  ELKKLKELVVDAKENNVKVVSSVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNMLKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDEKLIGDTVEKIAEDSNVQRGVFYEQTGLDQQLFPVEAEQQILEDHTDVNFDKELERMLTDV
        KKLALYEAS+IVDVQDIKHIAEDEKLIGDTVEKIAED NVQRGVFYEQTGLDQQ  PVEA+QQ+LEDH DVNFDKELERMLTDV
Subjt:  KKLALYEASEIVDVQDIKHIAEDEKLIGDTVEKIAEDSNVQRGVFYEQTGLDQQLFPVEAEQQILEDHTDVNFDKELERMLTDV

A0A1S3C4E1 uncharacterized protein LOC103496883 isoform X1

1.6e-147

95.42

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMLSTASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSF DMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHM S ASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMLSTASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVVDAKENNVKVVSSVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNMLKKMSTDYSEA
        ELKKLKELV+DAKENNVKVVS VVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSN+L KMSTDYSEA
Subjt:  ELKKLKELVVDAKENNVKVVSSVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNMLKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDEKLIGDTVEKIAEDSNVQRGVFYEQTGLDQQLFPVEAEQQILEDHTDVNFDKELERMLTDV
        KKLALYEAS+IVDVQDIKHIAEDEKLIGDTVEKIAED NVQRGVFYEQTGLDQQL PVEA+QQ+LEDHTDV+FDKELERMLTDV
Subjt:  KKLALYEASEIVDVQDIKHIAEDEKLIGDTVEKIAEDSNVQRGVFYEQTGLDQQLFPVEAEQQILEDHTDVNFDKELERMLTDV

A0A1S3C4X9 uncharacterized protein LOC103496883 isoform X2

1.1e-145

95.07

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMLSTASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSF DMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHM S ASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMLSTASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVVDAKENNVKVVSSVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNMLKKMSTDYSEA
        ELKKLKELV+DAKENNVKVVS VVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSN+L KMSTDYSEA
Subjt:  ELKKLKELVVDAKENNVKVVSSVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNMLKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDEKLIGDTVEKIAEDSNVQRGVFYEQTGLDQQLFPVEAEQQILEDHTDVNFDKELERMLTDV
        KKLALY AS+IVDVQDIKHIAEDEKLIGDTVEKIAED NVQRGVFYEQTGLDQQL PVEA+QQ+LEDHTDV+FDKELERMLTDV
Subjt:  KKLALYEASEIVDVQDIKHIAEDEKLIGDTVEKIAEDSNVQRGVFYEQTGLDQQLFPVEAEQQILEDHTDVNFDKELERMLTDV

A0A5A7VCA1 Putative mediator of RNA polymerase II transcription subunit 26 isoform X1

3.2e-148

96.13

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMLSTASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSF DMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHM S ASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMLSTASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVVDAKENNVKVVSSVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNMLKKMSTDYSEA
        ELKKLKELVVDAKENNVKVVS VVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSN+L KMSTDYSEA
Subjt:  ELKKLKELVVDAKENNVKVVSSVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNMLKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDEKLIGDTVEKIAEDSNVQRGVFYEQTGLDQQLFPVEAEQQILEDHTDVNFDKELERMLTDV
        KKLALYEAS+IVDVQDIKHIAEDEKLIGDTVEKIAED NVQRGVFYEQTGLDQQL PVEA+QQ+LEDHTDVNFDKELERMLTDV
Subjt:  KKLALYEASEIVDVQDIKHIAEDEKLIGDTVEKIAEDSNVQRGVFYEQTGLDQQLFPVEAEQQILEDHTDVNFDKELERMLTDV

A0A6J1CN36 uncharacterized protein LOC111013003

4.8e-128

83.57

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Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMLSTASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        M+LSPFRLDIDELI E+AE G+TSF DMK VW GRKFTYIFEAAPS NLAFFMQS++AQSI HM+ TASL  RLGG YCLYCLYETQPF+PPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMLSTASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVVDAKENNVKVVSSVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNMLKKMSTDYSEA
        ELKKLKELVVDAKE NVKV S+V KRMLEKNMFLFGSVDMNES+ALETVNQLTELQNAR+QVAYNKLF+DTPIE+YIHMDLGMEVG N+LKKMSTDYSEA
Subjt:  ELKKLKELVVDAKENNVKVVSSVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNMLKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDEKLIGDTVEKIAEDSNVQRGVFYEQTGLDQQLFPVEA--EQQILEDHTDVNFDKELERMLTDV
        KKLALYEAS+I+DVQDIKHI+ED++LIGDTVE+IAE+ NVQRGVFYEQTGLD+QL PVEA  E Q+L  H D NFDKELERMLTD+
Subjt:  KKLALYEASEIVDVQDIKHIAEDEKLIGDTVEKIAEDSNVQRGVFYEQTGLDQQLFPVEA--EQQILEDHTDVNFDKELERMLTDV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G53270.1 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein

9.0e-79

51.77

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMLSTASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        M+LSPF+ DIDELI+EF E   T+F DMK VW+ RKF++I+EA+P++NLAFFMQS++  +I HM+S  S   RLGGLYCLYCL+E QPF+P ++IY+S+ 
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMLSTASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVVDAKENNVKVVSSVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNMLKKMSTDYSEA
        EL K ++LVV+AK+  V++ ++V K+ML++NM +FG+VD  E++A +T++QLTELQNARV+ AY KL  DT I  +IH+D+G EV  N L KMS +Y+EA
Subjt:  ELKKLKELVVDAKENNVKVVSSVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNMLKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDEKLIGDTVEKIAEDSNVQRGVFYEQTGLDQQLFPVEAEQQILEDHTDVNFDKELERMLT
        KK A+  A EI+++ DIKHI+E+++L+G+ +EK+ E+ + QR  FYEQT LD   F    +Q    +H + +   EL+R+L+
Subjt:  KKLALYEASEIVDVQDIKHIAEDEKLIGDTVEKIAEDSNVQRGVFYEQTGLDQQLFPVEAEQQILEDHTDVNFDKELERMLT

AT3G53270.2 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein

9.0e-79

51.77

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMLSTASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        M+LSPF+ DIDELI+EF E   T+F DMK VW+ RKF++I+EA+P++NLAFFMQS++  +I HM+S  S   RLGGLYCLYCL+E QPF+P ++IY+S+ 
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMLSTASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVVDAKENNVKVVSSVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNMLKKMSTDYSEA
        EL K ++LVV+AK+  V++ ++V K+ML++NM +FG+VD  E++A +T++QLTELQNARV+ AY KL  DT I  +IH+D+G EV  N L KMS +Y+EA
Subjt:  ELKKLKELVVDAKENNVKVVSSVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNMLKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDEKLIGDTVEKIAEDSNVQRGVFYEQTGLDQQLFPVEAEQQILEDHTDVNFDKELERMLT
        KK A+  A EI+++ DIKHI+E+++L+G+ +EK+ E+ + QR  FYEQT LD   F    +Q    +H + +   EL+R+L+
Subjt:  KKLALYEASEIVDVQDIKHIAEDEKLIGDTVEKIAEDSNVQRGVFYEQTGLDQQLFPVEAEQQILEDHTDVNFDKELERMLT

AT3G53270.3 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein

9.0e-79

51.77

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMLSTASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        M+LSPF+ DIDELI+EF E   T+F DMK VW+ RKF++I+EA+P++NLAFFMQS++  +I HM+S  S   RLGGLYCLYCL+E QPF+P ++IY+S+ 
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMLSTASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVVDAKENNVKVVSSVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNMLKKMSTDYSEA
        EL K ++LVV+AK+  V++ ++V K+ML++NM +FG+VD  E++A +T++QLTELQNARV+ AY KL  DT I  +IH+D+G EV  N L KMS +Y+EA
Subjt:  ELKKLKELVVDAKENNVKVVSSVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNMLKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDEKLIGDTVEKIAEDSNVQRGVFYEQTGLDQQLFPVEAEQQILEDHTDVNFDKELERMLT
        KK A+  A EI+++ DIKHI+E+++L+G+ +EK+ E+ + QR  FYEQT LD   F    +Q    +H + +   EL+R+L+
Subjt:  KKLALYEASEIVDVQDIKHIAEDEKLIGDTVEKIAEDSNVQRGVFYEQTGLDQQLFPVEAEQQILEDHTDVNFDKELERMLT

AT3G53270.4 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein

9.0e-79

51.77

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMLSTASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        M+LSPF+ DIDELI+EF E   T+F DMK VW+ RKF++I+EA+P++NLAFFMQS++  +I HM+S  S   RLGGLYCLYCL+E QPF+P ++IY+S+ 
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMLSTASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVVDAKENNVKVVSSVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNMLKKMSTDYSEA
        EL K ++LVV+AK+  V++ ++V K+ML++NM +FG+VD  E++A +T++QLTELQNARV+ AY KL  DT I  +IH+D+G EV  N L KMS +Y+EA
Subjt:  ELKKLKELVVDAKENNVKVVSSVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNMLKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDEKLIGDTVEKIAEDSNVQRGVFYEQTGLDQQLFPVEAEQQILEDHTDVNFDKELERMLT
        KK A+  A EI+++ DIKHI+E+++L+G+ +EK+ E+ + QR  FYEQT LD   F    +Q    +H + +   EL+R+L+
Subjt:  KKLALYEASEIVDVQDIKHIAEDEKLIGDTVEKIAEDSNVQRGVFYEQTGLDQQLFPVEAEQQILEDHTDVNFDKELERMLT

AT3G53270.5 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein

9.0e-79

51.77

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Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMLSTASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        M+LSPF+ DIDELI+EF E   T+F DMK VW+ RKF++I+EA+P++NLAFFMQS++  +I HM+S  S   RLGGLYCLYCL+E QPF+P ++IY+S+ 
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMLSTASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVVDAKENNVKVVSSVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNMLKKMSTDYSEA
        EL K ++LVV+AK+  V++ ++V K+ML++NM +FG+VD  E++A +T++QLTELQNARV+ AY KL  DT I  +IH+D+G EV  N L KMS +Y+EA
Subjt:  ELKKLKELVVDAKENNVKVVSSVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNMLKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDEKLIGDTVEKIAEDSNVQRGVFYEQTGLDQQLFPVEAEQQILEDHTDVNFDKELERMLT
        KK A+  A EI+++ DIKHI+E+++L+G+ +EK+ E+ + QR  FYEQT LD   F    +Q    +H + +   EL+R+L+
Subjt:  KKLALYEASEIVDVQDIKHIAEDEKLIGDTVEKIAEDSNVQRGVFYEQTGLDQQLFPVEAEQQILEDHTDVNFDKELERMLT

Sequences

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CDS sequence

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ATGGATCTCTCTCCATTCAGGCTTGATATTGATGAGTTGATCAATGAATTTGCTGAGTGTGGATTTACATCTTTTGTTGATATGAAGAAAGTATGGATTGGAAGAAAATT
CACTTACATATTTGAGGCTGCTCCTTCTACCAACTTGGCCTTCTTTATGCAATCAATCTTTGCCCAATCAATTAGTCACATGCTCAGTACTGCTTCTTTGCCACACAGAT
TAGGTGGCCTTTATTGCCTTTACTGCCTTTATGAGACACAACCCTTTAGGCCCCCTTACAAAATCTACCTGTCTATTGGAGAGTTGAAGAAACTGAAGGAACTTGTTGTT
GATGCAAAAGAAAATAATGTAAAAGTGGTATCTTCTGTGGTGAAAAGAATGTTAGAAAAGAACATGTTTCTCTTTGGATCTGTGGACATGAATGAGAGTGCTGCTTTGGA
AACGGTGAATCAACTAACAGAATTGCAAAATGCTCGCGTGCAAGTAGCCTATAATAAGTTGTTTAATGATACGCCAATTGAAAATTATATCCATATGGACTTGGGGATGG
AAGTTGGTTCAAATATGTTAAAAAAGATGTCAACGGATTATTCAGAGGCCAAGAAACTTGCATTATATGAAGCAAGTGAGATAGTGGATGTTCAGGACATAAAGCACATA
GCAGAAGATGAGAAATTGATTGGAGATACAGTTGAAAAGATTGCCGAGGACTCGAACGTTCAGAGAGGAGTTTTTTATGAACAAACTGGACTCGACCAACAGCTTTTTCC
AGTCGAGGCAGAGCAGCAGATACTCGAAGATCACACTGATGTAAACTTTGATAAGGAACTCGAAAGAATGCTAACTGATGTTTAA

mRNA sequence

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CTCCAATCGTAGTTCGAGCCTTTCCTCTGAATTGTGTCCTCTCTTCTCCTCGTTTCAGTCACGGTCGCCGTCACCTCCGCCGCCGCCCATCTCGTTTAAACGCTGTCTCT
CCCCCAACCCTTCCAAGAAATTTCTGGATGCAATGGATCTCTCTCCATTCAGGCTTGATATTGATGAGTTGATCAATGAATTTGCTGAGTGTGGATTTACATCTTTTGTT
GATATGAAGAAAGTATGGATTGGAAGAAAATTCACTTACATATTTGAGGCTGCTCCTTCTACCAACTTGGCCTTCTTTATGCAATCAATCTTTGCCCAATCAATTAGTCA
CATGCTCAGTACTGCTTCTTTGCCACACAGATTAGGTGGCCTTTATTGCCTTTACTGCCTTTATGAGACACAACCCTTTAGGCCCCCTTACAAAATCTACCTGTCTATTG
GAGAGTTGAAGAAACTGAAGGAACTTGTTGTTGATGCAAAAGAAAATAATGTAAAAGTGGTATCTTCTGTGGTGAAAAGAATGTTAGAAAAGAACATGTTTCTCTTTGGA
TCTGTGGACATGAATGAGAGTGCTGCTTTGGAAACGGTGAATCAACTAACAGAATTGCAAAATGCTCGCGTGCAAGTAGCCTATAATAAGTTGTTTAATGATACGCCAAT
TGAAAATTATATCCATATGGACTTGGGGATGGAAGTTGGTTCAAATATGTTAAAAAAGATGTCAACGGATTATTCAGAGGCCAAGAAACTTGCATTATATGAAGCAAGTG
AGATAGTGGATGTTCAGGACATAAAGCACATAGCAGAAGATGAGAAATTGATTGGAGATACAGTTGAAAAGATTGCCGAGGACTCGAACGTTCAGAGAGGAGTTTTTTAT
GAACAAACTGGACTCGACCAACAGCTTTTTCCAGTCGAGGCAGAGCAGCAGATACTCGAAGATCACACTGATGTAAACTTTGATAAGGAACTCGAAAGAATGCTAACTGA
TGTTTAAACAAGGTATCTGCACTGAAAACTGACTCCAATCTAGAACATCGCTGAATGGTAAAGAATAGTTATCAGAAATGATCACTGGAACACAACCGCCATAGATGGCT
TCCACCACCCTCGGGCTTGCCACTTCGTAGCCACTAGGGCAGAGACAAAACTTGCTTTCTCCAATCAATTTGGTGTAGTTTTGGGTCTTAGGAAGGTATTCATGAACTTG
AACTTCATTATCCTTTTCCTTCCAATGCTTGATCAAAATCTTCCTGATGTATCCATGAGCTCCTCCAGCGAAGAAAGCTAGAATTGGGCGGCGTTCTGGTGGCTGGCCTA
AGTCCGGTGGCCCTAATGTTCCAGGGTGGATGGTGATTTCTGGGAGTGGAATGTCTATGTTGGGACGAAAGCCTTCTGTGATGTTCGCATTGCATACTACCCTGATGAAG
TTCTTGAACAGTTGGGGGTTGGCATCTGAGATTTCTGGTGCCTTGAAATCACCGTTAGAAGTTAGGAGGAAGCATTAGAAAAAGAAGAAACAAAGACTTGATAACAAGTA
GAATCTTAATTCTTACCCAATCATGGCATGAAACCACAAAATGATCAGCACCATTGCTCCGGTTCCAATATGGATACCTGTTGGCAACAACTCGAATGTAATCAGTTGTC
ACACGGTGCATCCGATCACGGCTGTAGTCAGTGGGAGAAGTGATTGGCCTATAAATGAAATGAATGATGTTGGTGATACTCAAAGGAAGAAGAAATACATGAGCTTGATC
AGGATGGCTGGCTTTAAAAGGGCTCTTGCTGCAATCTAACTCATCTATAAATTGGCCTTCAATGGCGTATATGCTATTCAATGGACCGTCATGGAACAGAGGCTGTTCTC
CTTCTCTATAACTCCAAACTTTGAACCTCTTCACCATTTCTATGTGGCTTCTGCATAACATTTTGGATATACTGTTAGCTTATTGGTGGAAAATGATTATTATTTTGGGT
TATTGCATTGGATAGCACTTTTGGGGATTATAATTAAGTGTATAGCAACATTTTCAAAGAATTGCAAAAATAGCAAAATCTATCGGTGATAACCTCTATTGCTGACATGC
TTCTACTAGTGATATGGTCCATCGTTGATAGATTTCGAGAACTAAATCTAAACTTTGCTATATTTGCAATTCTTACATTGTGAAATCTCTGCAAATACTTTAAGTTTGAT
TGTTATATTTGCCTCTAGCCAAATATTTATTATTAGTAATAACTCAAGTTTTATATAATATATTTAATGTTTGTTCCTTTTTCAATAGGAAAAGGAATACTCAACTGATG
AAAAGCATAAGGATTTCTGTAAATGGGGCCTCTGGGAATGTAAGTTTCTTTCTTCTCCGATGTGAAGTTTTTCCACAGAACTGCCTTTCGGATCGACGCTCGAGCTTCAC
CCAAACTTGCTTCAATCATCTTCAAACTCGTCTTCTTCTTCTTCTGCTCCAAAAACCTCAAAATGAAAACTAAGAAAATTTGACAACAGCAAAAACACTAAAGAAAGAAA
GGGAGAGCCTTTTTTGTCCATTCTTACTTTGATGAATATAGCTTTCATGGGTTTGTTGCCTTCTCTCATGGAGTTTATGGGAAACAGAGAAGAGGCTAATGGAAAAGCTT
TAGTTGCTTGTGACAGGTCCAACAGTGGTGGAATAGAAAAAAACTGAAGGAAAAAAAAAAGAAGAAGACTTGCTGGAAGTAGCAAGCAATAGAGACGGCAGCTGAAGCTT
GTCATGGCTGAACTCTTCATTTCAAGCTCTTTCTCTTAGCTTTTTTCCTTTTTAAATGTTCAATGAAAGAGAAACTGAAGAGAATTGCCAGTAGAAAAAGGTTTGAATTT
CTTCGTTCCTCCAAAATCGATGTAATTGAATTCAAAAGAGTTATTAATTAATGCATTTTGTTGAATACTATGGTGGAAACATTGCTCGGAAAAAGTGATGCTTGTAGACA
CCGGTACCTTAATTTAAATTTTCTTAAGTTCTTAGATTTAAAA

Protein sequence

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MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMLSTASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIGELKKLKELVV
DAKENNVKVVSSVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNMLKKMSTDYSEAKKLALYEASEIVDVQDIKHI
AEDEKLIGDTVEKIAEDSNVQRGVFYEQTGLDQQLFPVEAEQQILEDHTDVNFDKELERMLTDV

PI0027828 (gene) of Melon (PI 482460) v1 genome