; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0027836 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027836
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDNA-directed RNA polymerase subunit beta
Genome locationchr03:5243080..5262448
RNA-Seq ExpressionPI0027836
SyntenyPI0027836
Gene Ontology termsGO:0006351 - transcription, DNA-templated (biological process)
GO:0009561 - megagametogenesis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0032549 - ribonucleoside binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsIPR007641 - RNA polymerase Rpb2, domain 7
IPR037034 - RNA polymerase Rpb2, domain 2 superfamily
IPR037033 - DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily
IPR015712 - DNA-directed RNA polymerase, subunit 2
IPR014724 - RNA polymerase Rpb2, OB-fold
IPR009674 - DNA-directed RNA polymerase I subunit RPA2, domain 4
IPR007645 - RNA polymerase Rpb2, domain 3
IPR007644 - RNA polymerase, beta subunit, protrusion
IPR007642 - RNA polymerase Rpb2, domain 2
IPR007121 - RNA polymerase, beta subunit, conserved site
IPR007120 - DNA-directed RNA polymerase, subunit 2, hybrid-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647280.1 hypothetical protein Csa_002964 [Cucumis sativus]0.0e+0095.43Show/hide
Query:  FMNESELYPPQKERNLRTIREALFPYECRQAKISYTG-------------TVIREKFNFGQFPIML--KLCHLRGLDPK-------------NYFVMNGL
        ++ + ELYPPQKERNLRTIREAL PYECRQAKISYTG              VIREKFNFGQFPIML  KLCHLRGLDPK              YFVMNGL
Subjt:  FMNESELYPPQKERNLRTIREALFPYECRQAKISYTG-------------TVIREKFNFGQFPIML--KLCHLRGLDPK-------------NYFVMNGL

Query:  ERVVRLLIAPKRNYPMSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDK
        ERVVRLLIAPKRNYP SMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDK
Subjt:  ERVVRLLIAPKRNYPMSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDK

Query:  HGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVHLDSNYDKFNLLIFMAQKLFSLIDQTSVADN
        HGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVHLD+NYDKFNLLIFMAQKLFSLIDQTSV DN
Subjt:  HGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVHLDSNYDKFNLLIFMAQKLFSLIDQTSVADN

Query:  PDSLQNQDVLLPGQLITLYLKEKLEDWLQKAKKLLEDEVSNPSKNFEFSSLAHVKKVMDKNPSKQISSAVENLLKTGRLVTQTGLDLQQRAGFTVQAERL
        PDSLQNQDVLLPGQLITLYLKEKLEDWLQK KKLLEDE+SNPSKNFEF SLAHVKKVMDKNPSKQ+SSAVEN+LKTGRLVTQTGLDLQQRAGFTVQAERL
Subjt:  PDSLQNQDVLLPGQLITLYLKEKLEDWLQKAKKLLEDEVSNPSKNFEFSSLAHVKKVMDKNPSKQISSAVENLLKTGRLVTQTGLDLQQRAGFTVQAERL

Query:  NFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMG
        NFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITS+FNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMG
Subjt:  NFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMG

Query:  PPDVLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSISGAYPGLYLFTSPSRFVRPVKNLSISTEDNHNIELIGPFEQVFMEIQ
         PD LNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSISGAYPGLYLFTSPSRFVRPVKNLSIS EDNHNIELIGPFEQVFMEI+
Subjt:  PPDVLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSISGAYPGLYLFTSPSRFVRPVKNLSISTEDNHNIELIGPFEQVFMEIQ

Query:  CPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNA
        CPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNA
Subjt:  CPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNA

Query:  IVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMK
        IVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMK
Subjt:  IVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMK

Query:  LKGSEAVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLN
        LKGSEAVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLN
Subjt:  LKGSEAVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLN

Query:  GEFVNATPFRSSVNKTNAGDEETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRK
        GEFVNATPFRSSVNKTNAGDEETN ETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRK
Subjt:  GEFVNATPFRSSVNKTNAGDEETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRK

Query:  KGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAE
        KGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGS+LTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAE
Subjt:  KGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAE

Query:  LAAMNIKMTLQLSSGAA
        LAAMNIKMTLQLSSGAA
Subjt:  LAAMNIKMTLQLSSGAA

XP_004146776.1 DNA-directed RNA polymerase I subunit 2 [Cucumis sativus]0.0e+0095.43Show/hide
Query:  FMNESELYPPQKERNLRTIREALFPYECRQAKISYTG-------------TVIREKFNFGQFPIML--KLCHLRGLDPK-------------NYFVMNGL
        ++ + ELYPPQKERNLRTIREAL PYECRQAKISYTG              VIREKFNFGQFPIML  KLCHLRGLDPK              YFVMNGL
Subjt:  FMNESELYPPQKERNLRTIREALFPYECRQAKISYTG-------------TVIREKFNFGQFPIML--KLCHLRGLDPK-------------NYFVMNGL

Query:  ERVVRLLIAPKRNYPMSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDK
        ERVVRLLIAPKRNYP SMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDK
Subjt:  ERVVRLLIAPKRNYPMSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDK

Query:  HGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVHLDSNYDKFNLLIFMAQKLFSLIDQTSVADN
        HGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVHLD+NYDKFNLLIFMAQKLFSLIDQTSV DN
Subjt:  HGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVHLDSNYDKFNLLIFMAQKLFSLIDQTSVADN

Query:  PDSLQNQDVLLPGQLITLYLKEKLEDWLQKAKKLLEDEVSNPSKNFEFSSLAHVKKVMDKNPSKQISSAVENLLKTGRLVTQTGLDLQQRAGFTVQAERL
        PDSLQNQDVLLPGQLITLYLKEKLEDWLQK KKLLEDE+SNPSKNFEF SLAHVKKVMDKNPSKQ+SSAVEN+LKTGRLVTQTGLDLQQRAGFTVQAERL
Subjt:  PDSLQNQDVLLPGQLITLYLKEKLEDWLQKAKKLLEDEVSNPSKNFEFSSLAHVKKVMDKNPSKQISSAVENLLKTGRLVTQTGLDLQQRAGFTVQAERL

Query:  NFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMG
        NFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITS+FNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMG
Subjt:  NFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMG

Query:  PPDVLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSISGAYPGLYLFTSPSRFVRPVKNLSISTEDNHNIELIGPFEQVFMEIQ
         PD LNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSISGAYPGLYLFTSPSRFVRPVKNLSIS EDNHNIELIGPFEQVFMEI+
Subjt:  PPDVLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSISGAYPGLYLFTSPSRFVRPVKNLSISTEDNHNIELIGPFEQVFMEIQ

Query:  CPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNA
        CPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNA
Subjt:  CPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNA

Query:  IVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMK
        IVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMK
Subjt:  IVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMK

Query:  LKGSEAVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLN
        LKGSEAVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLN
Subjt:  LKGSEAVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLN

Query:  GEFVNATPFRSSVNKTNAGDEETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRK
        GEFVNATPFRSSVNKTNAGDEETN ETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRK
Subjt:  GEFVNATPFRSSVNKTNAGDEETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRK

Query:  KGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAE
        KGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGS+LTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAE
Subjt:  KGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAE

Query:  LAAMNIKMTLQLSSGAA
        LAAMNIKMTLQLSSGAA
Subjt:  LAAMNIKMTLQLSSGAA

XP_008445376.1 PREDICTED: DNA-directed RNA polymerase I subunit 2 [Cucumis melo]0.0e+0095.07Show/hide
Query:  FMNESELYPPQKERNLRTIREALFPYECRQAKISYTG-------------TVIREKFNFGQFPIML--KLCHLRGLDPK-------------NYFVMNGL
        ++ + ELYPPQKERNLRTIREAL PYECRQAKISYTG              VIREKFNFGQFPIML  KLCHLRGLDPK              YFVMNGL
Subjt:  FMNESELYPPQKERNLRTIREALFPYECRQAKISYTG-------------TVIREKFNFGQFPIML--KLCHLRGLDPK-------------NYFVMNGL

Query:  ERVVRLLIAPKRNYPMSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDK
        ERVVRLLIAPKRNYPMSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDT DHEIYASLTSCYSDK
Subjt:  ERVVRLLIAPKRNYPMSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDK

Query:  HGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVHLDSNYDKFNLLIFMAQKLFSLIDQTSVADN
        HGKSKGAV TQLVGERAKIILDEVRDLALFD RQCLDHIGQHFQPVMEGLGKEKFSTVADAVLK+YIFVHLD+NYDKFNLLIFMAQKLFSLIDQTSV DN
Subjt:  HGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVHLDSNYDKFNLLIFMAQKLFSLIDQTSVADN

Query:  PDSLQNQDVLLPGQLITLYLKEKLEDWLQKAKKLLEDEVSNPSKNFEFSSLAHVKKVMDKNPSKQISSAVENLLKTGRLVTQTGLDLQQRAGFTVQAERL
        PDSLQNQDVLLPGQLITLYLKEKLEDWLQK+KKLLEDE+SNPSKNFEF SLAHVKKVMDKNPSKQISSAVEN+LKTGRLVTQTGLDLQQRAGFTVQAERL
Subjt:  PDSLQNQDVLLPGQLITLYLKEKLEDWLQKAKKLLEDEVSNPSKNFEFSSLAHVKKVMDKNPSKQISSAVENLLKTGRLVTQTGLDLQQRAGFTVQAERL

Query:  NFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMG
        NFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMG
Subjt:  NFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMG

Query:  PPDVLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSISGAYPGLYLFTSPSRFVRPVKNLSISTEDNHNIELIGPFEQVFMEIQ
        PPDVLNVLLDGR+VGYISSNEVEK+VAHLRRLKVLSPHVIPDDLEVGYVPLSISGAYPGLYLFTSPSRFVRPVKNLSIS EDNHNIELIGPFEQVFMEI+
Subjt:  PPDVLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSISGAYPGLYLFTSPSRFVRPVKNLSISTEDNHNIELIGPFEQVFMEIQ

Query:  CPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNA
        CPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNA
Subjt:  CPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNA

Query:  IVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMK
        IVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMK
Subjt:  IVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMK

Query:  LKGSEAVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLN
        LKGSEAVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPD+DMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLN
Subjt:  LKGSEAVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLN

Query:  GEFVNATPFRSSVNKTNAGDEETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRK
        GEFVNATPFRSSV KTNAGD ETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRK
Subjt:  GEFVNATPFRSSVNKTNAGDEETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRK

Query:  KGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAE
        KGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAE
Subjt:  KGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAE

Query:  LAAMNIKMTLQLSSGA
        LAAMNIKMTL+LS+GA
Subjt:  LAAMNIKMTLQLSSGA

XP_022131547.1 DNA-directed RNA polymerase I subunit 2 [Momordica charantia]0.0e+0089.34Show/hide
Query:  FMNESELYPPQKERNLRTIREALFPYECRQAKISYTG-------------TVIREKFNFGQFPIML--KLCHLRGLDPK-------------NYFVMNGL
        ++ + ELYPPQKER+LRTIREAL PYECRQAKISYTG              VIREKFNFGQFPIML  KLCHLRGLDPK              YF+MNGL
Subjt:  FMNESELYPPQKERNLRTIREALFPYECRQAKISYTG-------------TVIREKFNFGQFPIML--KLCHLRGLDPK-------------NYFVMNGL

Query:  ERVVRLLIAPKRNYPMSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDK
        ERVVRLLI+PKRNY MSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFW+QG+EYLLP+GVVLKALIDTTDHEIYASLTSCYSDK
Subjt:  ERVVRLLIAPKRNYPMSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDK

Query:  HGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVHLDSNYDKFNLLIFMAQKLFSLIDQTSVADN
        HGK KGAVGTQLVGERAKIILDEVRDLALFDHRQCL+HIGQHFQPVMEGLGKEKFST+ADAVL+DYIFVHLD+NYDKFNLLIFMAQKLFSL+DQTSV DN
Subjt:  HGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVHLDSNYDKFNLLIFMAQKLFSLIDQTSVADN

Query:  PDSLQNQDVLLPGQLITLYLKEKLEDWLQKAKKLLEDEVSNPSKNFEFSSLAHVKKVMDKNPSKQISSAVENLLKTGRLVTQTGLDLQQRAGFTVQAERL
        PDSLQNQDV+LPGQLIT+YLKEKLEDWLQKAKKLL+DE+++ SKNF+F SLAHVKKVMDKNPSKQISSAVEN+LKTGRLVTQTGLDLQQRAGFTVQAERL
Subjt:  PDSLQNQDVLLPGQLITLYLKEKLEDWLQKAKKLLEDEVSNPSKNFEFSSLAHVKKVMDKNPSKQISSAVENLLKTGRLVTQTGLDLQQRAGFTVQAERL

Query:  NFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMG
        NFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDF+KIR SILSVL+AVGMIPSLPKLVQMG
Subjt:  NFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMG

Query:  PPDVLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSISGAYPGLYLFTSPSRFVRPVKNLSISTEDNHNIELIGPFEQVFMEIQ
        PPDVLNVLLDGRIVGY+SS+EVEK+VAHLR+LKV S HVIP+DLEVGYVPLSI GAYPGLYLFTSPSRF+RPVKNLSISTE+NHNIE IGPFEQVFMEI+
Subjt:  PPDVLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSISGAYPGLYLFTSPSRFVRPVKNLSISTEDNHNIELIGPFEQVFMEIQ

Query:  CPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNA
        CPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQA+++RADQKLYHLQTPQTPIVRTSTY KY++DEYPTGTNA
Subjt:  CPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNA

Query:  IVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMK
        IVAVLAYTGYDMEDAMILNKSSVERGM+HGQIYQTETIDLS+Q NRS+RSQK+FRRSNIDTSVR ++D+DGLPYVGQMI PDEPYCSIYDEV+GTTR MK
Subjt:  IVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMK

Query:  LKGSEAVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLN
        LKGSE VIVDYVSVDVKNK +PQKVNIRFR PRNP+IGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLN
Subjt:  LKGSEAVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLN

Query:  GEFVNATPFRSSVNKTNAGDEETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRK
        GEFV+ATPF+SSV KTN GDEE   ETLVDELGS LIKKGFNYHG+EVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTG VDQ+TRQPIKGRK
Subjt:  GEFVNATPFRSSVNKTNAGDEETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRK

Query:  KGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAE
        KGGGIRFGEMERDSMLAHGA+YLLHDRLHTCSDHHIADVCSLCGSILTSSF+QP KRA R IGGLPPGKAPKRVTC ACKTSKGMETVAMPYVF+YLAAE
Subjt:  KGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAE

Query:  LAAMNIKMTLQLSSGA
        LAAMNIKMTL+LS  A
Subjt:  LAAMNIKMTLQLSSGA

XP_038886021.1 DNA-directed RNA polymerase I subunit 2 isoform X1 [Benincasa hispida]0.0e+0092.84Show/hide
Query:  FMNESELYPPQKERNLRTIREALFPYECRQAKISYTG-------------TVIREKFNFGQFPIML--KLCHLRGLDPK-------------NYFVMNGL
        ++ + ELYPPQKERNLRTIREAL PYECRQAKISYTG              VIREKFNFG FPIML  KLCHLRGLDP               YF+MNGL
Subjt:  FMNESELYPPQKERNLRTIREALFPYECRQAKISYTG-------------TVIREKFNFGQFPIML--KLCHLRGLDPK-------------NYFVMNGL

Query:  ERVVRLLIAPKRNYPMSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDK
        ERVVRLLIAPKRNYPMSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDK
Subjt:  ERVVRLLIAPKRNYPMSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDK

Query:  HGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVHLDSNYDKFNLLIFMAQKLFSLIDQTSVADN
        HGK KGAVGT+LVGERAKIILDEVRDLALFDHRQCL+HIGQHFQPVMEGLGKEK+ST+ADAVLK YIFVHLD+NYDKFNLLIFMAQKLFSL+DQTSV DN
Subjt:  HGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVHLDSNYDKFNLLIFMAQKLFSLIDQTSVADN

Query:  PDSLQNQDVLLPGQLITLYLKEKLEDWLQKAKKLLEDEVSNPSKNFEFSSLAHVKKVMDKNPSKQISSAVENLLKTGRLVTQTGLDLQQRAGFTVQAERL
        PDSLQNQDVLLPGQLIT+YLKEKLEDWLQK KKLL+DE+SNP+KNFEF SLAHVKKVMDKNPSKQIS AVEN+LKTGRLVTQTGLDLQQRAGFTVQAERL
Subjt:  PDSLQNQDVLLPGQLITLYLKEKLEDWLQKAKKLLEDEVSNPSKNFEFSSLAHVKKVMDKNPSKQISSAVENLLKTGRLVTQTGLDLQQRAGFTVQAERL

Query:  NFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMG
        NFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDF+KIRTSILSVLIAVGMIPSLPKLVQMG
Subjt:  NFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMG

Query:  PPDVLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSISGAYPGLYLFTSPSRFVRPVKNLSISTEDNHNIELIGPFEQVFMEIQ
        PPDVLNVLLDGRIVGYISS+EVEKIVAHLRRLKVLS HVIP+DLEVGYVPLSISGAYPGLYLFTSPSRF+RPVKNLSIS+EDN NIELIGPFEQVFMEI+
Subjt:  PPDVLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSISGAYPGLYLFTSPSRFVRPVKNLSISTEDNHNIELIGPFEQVFMEIQ

Query:  CPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNA
        CPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTY KYNIDEYPTGTNA
Subjt:  CPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNA

Query:  IVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMK
        IVAVLAYTGYDMEDAMILNKSSVERGM+HGQIYQTETIDLSDQGNRSSRSQK+FRRSNIDTSVRSIID+DGLPYVGQMI PDEPYCSIYDEVAGTTRTMK
Subjt:  IVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMK

Query:  LKGSEAVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLN
        LKGSEAVIVDYVSVDVKNK +PQKVNIRFR PRNP+IGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLN
Subjt:  LKGSEAVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLN

Query:  GEFVNATPFRSSVNKTNAGDEETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRK
        GEFVNATPFRSSV KTN GDEE+NAETLVDELGSTLIK+GFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRK
Subjt:  GEFVNATPFRSSVNKTNAGDEETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRK

Query:  KGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAE
        KGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSS VQP KRAVREIGGLPPGKA KRVTCHACKTSKGMETVAMPYVFKYLAAE
Subjt:  KGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAE

Query:  LAAMNIKMTLQLSSGAA
        LAAMNIKMTLQLSSGAA
Subjt:  LAAMNIKMTLQLSSGAA

TrEMBL top hitse value%identityAlignment
A0A0A0KIZ8 DNA-directed RNA polymerase subunit beta0.0e+0095.43Show/hide
Query:  FMNESELYPPQKERNLRTIREALFPYECRQAKISYTG-------------TVIREKFNFGQFPIML--KLCHLRGLDPK-------------NYFVMNGL
        ++ + ELYPPQKERNLRTIREAL PYECRQAKISYTG              VIREKFNFGQFPIML  KLCHLRGLDPK              YFVMNGL
Subjt:  FMNESELYPPQKERNLRTIREALFPYECRQAKISYTG-------------TVIREKFNFGQFPIML--KLCHLRGLDPK-------------NYFVMNGL

Query:  ERVVRLLIAPKRNYPMSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDK
        ERVVRLLIAPKRNYP SMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDK
Subjt:  ERVVRLLIAPKRNYPMSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDK

Query:  HGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVHLDSNYDKFNLLIFMAQKLFSLIDQTSVADN
        HGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVHLD+NYDKFNLLIFMAQKLFSLIDQTSV DN
Subjt:  HGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVHLDSNYDKFNLLIFMAQKLFSLIDQTSVADN

Query:  PDSLQNQDVLLPGQLITLYLKEKLEDWLQKAKKLLEDEVSNPSKNFEFSSLAHVKKVMDKNPSKQISSAVENLLKTGRLVTQTGLDLQQRAGFTVQAERL
        PDSLQNQDVLLPGQLITLYLKEKLEDWLQK KKLLEDE+SNPSKNFEF SLAHVKKVMDKNPSKQ+SSAVEN+LKTGRLVTQTGLDLQQRAGFTVQAERL
Subjt:  PDSLQNQDVLLPGQLITLYLKEKLEDWLQKAKKLLEDEVSNPSKNFEFSSLAHVKKVMDKNPSKQISSAVENLLKTGRLVTQTGLDLQQRAGFTVQAERL

Query:  NFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMG
        NFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITS+FNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMG
Subjt:  NFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMG

Query:  PPDVLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSISGAYPGLYLFTSPSRFVRPVKNLSISTEDNHNIELIGPFEQVFMEIQ
         PD LNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSISGAYPGLYLFTSPSRFVRPVKNLSIS EDNHNIELIGPFEQVFMEI+
Subjt:  PPDVLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSISGAYPGLYLFTSPSRFVRPVKNLSISTEDNHNIELIGPFEQVFMEIQ

Query:  CPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNA
        CPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNA
Subjt:  CPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNA

Query:  IVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMK
        IVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMK
Subjt:  IVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMK

Query:  LKGSEAVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLN
        LKGSEAVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLN
Subjt:  LKGSEAVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLN

Query:  GEFVNATPFRSSVNKTNAGDEETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRK
        GEFVNATPFRSSVNKTNAGDEETN ETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRK
Subjt:  GEFVNATPFRSSVNKTNAGDEETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRK

Query:  KGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAE
        KGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGS+LTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAE
Subjt:  KGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAE

Query:  LAAMNIKMTLQLSSGAA
        LAAMNIKMTLQLSSGAA
Subjt:  LAAMNIKMTLQLSSGAA

A0A1S3BCJ8 DNA-directed RNA polymerase subunit beta0.0e+0095.07Show/hide
Query:  FMNESELYPPQKERNLRTIREALFPYECRQAKISYTG-------------TVIREKFNFGQFPIML--KLCHLRGLDPK-------------NYFVMNGL
        ++ + ELYPPQKERNLRTIREAL PYECRQAKISYTG              VIREKFNFGQFPIML  KLCHLRGLDPK              YFVMNGL
Subjt:  FMNESELYPPQKERNLRTIREALFPYECRQAKISYTG-------------TVIREKFNFGQFPIML--KLCHLRGLDPK-------------NYFVMNGL

Query:  ERVVRLLIAPKRNYPMSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDK
        ERVVRLLIAPKRNYPMSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDT DHEIYASLTSCYSDK
Subjt:  ERVVRLLIAPKRNYPMSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDK

Query:  HGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVHLDSNYDKFNLLIFMAQKLFSLIDQTSVADN
        HGKSKGAV TQLVGERAKIILDEVRDLALFD RQCLDHIGQHFQPVMEGLGKEKFSTVADAVLK+YIFVHLD+NYDKFNLLIFMAQKLFSLIDQTSV DN
Subjt:  HGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVHLDSNYDKFNLLIFMAQKLFSLIDQTSVADN

Query:  PDSLQNQDVLLPGQLITLYLKEKLEDWLQKAKKLLEDEVSNPSKNFEFSSLAHVKKVMDKNPSKQISSAVENLLKTGRLVTQTGLDLQQRAGFTVQAERL
        PDSLQNQDVLLPGQLITLYLKEKLEDWLQK+KKLLEDE+SNPSKNFEF SLAHVKKVMDKNPSKQISSAVEN+LKTGRLVTQTGLDLQQRAGFTVQAERL
Subjt:  PDSLQNQDVLLPGQLITLYLKEKLEDWLQKAKKLLEDEVSNPSKNFEFSSLAHVKKVMDKNPSKQISSAVENLLKTGRLVTQTGLDLQQRAGFTVQAERL

Query:  NFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMG
        NFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMG
Subjt:  NFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMG

Query:  PPDVLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSISGAYPGLYLFTSPSRFVRPVKNLSISTEDNHNIELIGPFEQVFMEIQ
        PPDVLNVLLDGR+VGYISSNEVEK+VAHLRRLKVLSPHVIPDDLEVGYVPLSISGAYPGLYLFTSPSRFVRPVKNLSIS EDNHNIELIGPFEQVFMEI+
Subjt:  PPDVLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSISGAYPGLYLFTSPSRFVRPVKNLSISTEDNHNIELIGPFEQVFMEIQ

Query:  CPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNA
        CPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNA
Subjt:  CPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNA

Query:  IVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMK
        IVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMK
Subjt:  IVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMK

Query:  LKGSEAVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLN
        LKGSEAVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPD+DMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLN
Subjt:  LKGSEAVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLN

Query:  GEFVNATPFRSSVNKTNAGDEETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRK
        GEFVNATPFRSSV KTNAGD ETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRK
Subjt:  GEFVNATPFRSSVNKTNAGDEETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRK

Query:  KGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAE
        KGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAE
Subjt:  KGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAE

Query:  LAAMNIKMTLQLSSGA
        LAAMNIKMTL+LS+GA
Subjt:  LAAMNIKMTLQLSSGA

A0A6J1BRB2 DNA-directed RNA polymerase subunit beta0.0e+0089.34Show/hide
Query:  FMNESELYPPQKERNLRTIREALFPYECRQAKISYTG-------------TVIREKFNFGQFPIML--KLCHLRGLDPK-------------NYFVMNGL
        ++ + ELYPPQKER+LRTIREAL PYECRQAKISYTG              VIREKFNFGQFPIML  KLCHLRGLDPK              YF+MNGL
Subjt:  FMNESELYPPQKERNLRTIREALFPYECRQAKISYTG-------------TVIREKFNFGQFPIML--KLCHLRGLDPK-------------NYFVMNGL

Query:  ERVVRLLIAPKRNYPMSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDK
        ERVVRLLI+PKRNY MSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFW+QG+EYLLP+GVVLKALIDTTDHEIYASLTSCYSDK
Subjt:  ERVVRLLIAPKRNYPMSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDK

Query:  HGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVHLDSNYDKFNLLIFMAQKLFSLIDQTSVADN
        HGK KGAVGTQLVGERAKIILDEVRDLALFDHRQCL+HIGQHFQPVMEGLGKEKFST+ADAVL+DYIFVHLD+NYDKFNLLIFMAQKLFSL+DQTSV DN
Subjt:  HGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVHLDSNYDKFNLLIFMAQKLFSLIDQTSVADN

Query:  PDSLQNQDVLLPGQLITLYLKEKLEDWLQKAKKLLEDEVSNPSKNFEFSSLAHVKKVMDKNPSKQISSAVENLLKTGRLVTQTGLDLQQRAGFTVQAERL
        PDSLQNQDV+LPGQLIT+YLKEKLEDWLQKAKKLL+DE+++ SKNF+F SLAHVKKVMDKNPSKQISSAVEN+LKTGRLVTQTGLDLQQRAGFTVQAERL
Subjt:  PDSLQNQDVLLPGQLITLYLKEKLEDWLQKAKKLLEDEVSNPSKNFEFSSLAHVKKVMDKNPSKQISSAVENLLKTGRLVTQTGLDLQQRAGFTVQAERL

Query:  NFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMG
        NFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDF+KIR SILSVL+AVGMIPSLPKLVQMG
Subjt:  NFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMG

Query:  PPDVLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSISGAYPGLYLFTSPSRFVRPVKNLSISTEDNHNIELIGPFEQVFMEIQ
        PPDVLNVLLDGRIVGY+SS+EVEK+VAHLR+LKV S HVIP+DLEVGYVPLSI GAYPGLYLFTSPSRF+RPVKNLSISTE+NHNIE IGPFEQVFMEI+
Subjt:  PPDVLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSISGAYPGLYLFTSPSRFVRPVKNLSISTEDNHNIELIGPFEQVFMEIQ

Query:  CPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNA
        CPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQA+++RADQKLYHLQTPQTPIVRTSTY KY++DEYPTGTNA
Subjt:  CPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNA

Query:  IVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMK
        IVAVLAYTGYDMEDAMILNKSSVERGM+HGQIYQTETIDLS+Q NRS+RSQK+FRRSNIDTSVR ++D+DGLPYVGQMI PDEPYCSIYDEV+GTTR MK
Subjt:  IVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMK

Query:  LKGSEAVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLN
        LKGSE VIVDYVSVDVKNK +PQKVNIRFR PRNP+IGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLN
Subjt:  LKGSEAVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLN

Query:  GEFVNATPFRSSVNKTNAGDEETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRK
        GEFV+ATPF+SSV KTN GDEE   ETLVDELGS LIKKGFNYHG+EVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTG VDQ+TRQPIKGRK
Subjt:  GEFVNATPFRSSVNKTNAGDEETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRK

Query:  KGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAE
        KGGGIRFGEMERDSMLAHGA+YLLHDRLHTCSDHHIADVCSLCGSILTSSF+QP KRA R IGGLPPGKAPKRVTC ACKTSKGMETVAMPYVF+YLAAE
Subjt:  KGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAE

Query:  LAAMNIKMTLQLSSGA
        LAAMNIKMTL+LS  A
Subjt:  LAAMNIKMTLQLSSGA

A0A6J1GI72 DNA-directed RNA polymerase subunit beta0.0e+0089.43Show/hide
Query:  FMNESELYPPQKERNLRTIREALFPYECRQAKISYTG-------------TVIREKFNFGQFPIML--KLCHLRGLDPK-------------NYFVMNGL
        ++ + ELYPPQKERNLRT+REAL P ECRQAKISYTG              VIREKFNFGQFP+ML  KLCHLRGLDPK              YF+MNGL
Subjt:  FMNESELYPPQKERNLRTIREALFPYECRQAKISYTG-------------TVIREKFNFGQFPIML--KLCHLRGLDPK-------------NYFVMNGL

Query:  ERVVRLLIAPKRNYPMSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDK
        ERVVRLLIAPKRNYPMSMVRNSF+DRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEI+ASLTSCYSDK
Subjt:  ERVVRLLIAPKRNYPMSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDK

Query:  HGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVHLDSNYDKFNLLIFMAQKLFSLIDQTSVADN
        H K KGAVGTQLVGERAKIILDEVRDLALFDHRQCL+HIGQHFQPVMEG+ KEK ST+ADAV K+YIFVHLD+NYDKFNLLIFMAQKLFSLIDQTSV DN
Subjt:  HGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVHLDSNYDKFNLLIFMAQKLFSLIDQTSVADN

Query:  PDSLQNQDVLLPGQLITLYLKEKLEDWLQKAKKLLEDEVSNPSKNFEFSSLAHVKKVMDKNPSKQISSAVENLLKTGRLVTQTGLDLQQRAGFTVQAERL
        PDSLQNQDVLLPGQLIT+Y+KEKLEDWLQK KKLL+DE+S+ SKNF+F SLA VKKVMDKNPSKQISSA++NLLKTGRLVTQTGLDLQQRAGFTVQAERL
Subjt:  PDSLQNQDVLLPGQLITLYLKEKLEDWLQKAKKLLEDEVSNPSKNFEFSSLAHVKKVMDKNPSKQISSAVENLLKTGRLVTQTGLDLQQRAGFTVQAERL

Query:  NFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMG
        NFLRF+SHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDF+KIR SILSVLIAVGMIPSLPKLVQMG
Subjt:  NFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMG

Query:  PPDVLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSISGAYPGLYLFTSPSRFVRPVKNLSISTEDNHNIELIGPFEQVFMEIQ
        PPDVLNV+LDGRIVGYISS EVEK+VAHLR+LKV SPHVIP+DLEVGYVPLSI GAYPGL+LFTSPSRFVRPV+NLSIS+E+N NIELIGPFEQVFMEI+
Subjt:  PPDVLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSISGAYPGLYLFTSPSRFVRPVKNLSISTEDNHNIELIGPFEQVFMEIQ

Query:  CPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNA
        CPDGGDGGRKDEFPATHEEIHPTGMLSVV NLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAI++RADQKLYHLQTPQTPIVRTSTY KYNIDEYPTGTNA
Subjt:  CPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNA

Query:  IVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMK
        IVAVLAYTGYDMEDAMILNKSSVERGM+HGQIYQTETIDLS+Q +RSSRSQK+FRRSNID SVRS ID+DGLPYVGQMI+PDEPYCSIYDEVAGTTR MK
Subjt:  IVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMK

Query:  LKGSEAVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLN
        LKGSE V VDYVSVDVKNK +PQKVNIRFR PRNP+IGDKFSSRHGQKGVCSQLWPDVDMPF GATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLN
Subjt:  LKGSEAVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLN

Query:  GEFVNATPFRSSVNKTNAGDEETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRK
        GEF+NATPF+SSV KTNAGDEE+  E+LVDELGSTL+KKGFNYHG+EVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRK
Subjt:  GEFVNATPFRSSVNKTNAGDEETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRK

Query:  KGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAE
        KGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTS+ VQP KRAVREIGGLPPGKAPKRV CHACKTSKGMETVAMPYVFKYLAAE
Subjt:  KGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAE

Query:  LAAMNIKMTLQLSSGA
        LAAMNI+MTLQLS+ A
Subjt:  LAAMNIKMTLQLSSGA

A0A6J1KKK5 DNA-directed RNA polymerase subunit beta0.0e+0089.25Show/hide
Query:  FMNESELYPPQKERNLRTIREALFPYECRQAKISYTG-------------TVIREKFNFGQFPIML--KLCHLRGLDPK-------------NYFVMNGL
        ++ ++E YPPQKERNLRT+REAL P ECRQAKISYTG              VIREKFNFGQFP+ML  KLCHLRGLDPK              YF+MNGL
Subjt:  FMNESELYPPQKERNLRTIREALFPYECRQAKISYTG-------------TVIREKFNFGQFPIML--KLCHLRGLDPK-------------NYFVMNGL

Query:  ERVVRLLIAPKRNYPMSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDK
        ERVVRLLIAPKRNYPMSMVRNSF+DRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWV+GKEYLLPIGVVLKALIDTTDHEI+ASLTSCYSDK
Subjt:  ERVVRLLIAPKRNYPMSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDK

Query:  HGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVHLDSNYDKFNLLIFMAQKLFSLIDQTSVADN
        H K KGAVGTQLVGERAKIILDEVRDLALFDHRQCL+HIGQHFQPVMEG+ KEK ST+ADAV K+YIFVHLD+NYDKFNLLIFMAQKLFSLIDQTSV DN
Subjt:  HGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVHLDSNYDKFNLLIFMAQKLFSLIDQTSVADN

Query:  PDSLQNQDVLLPGQLITLYLKEKLEDWLQKAKKLLEDEVSNPSKNFEFSSLAHVKKVMDKNPSKQISSAVENLLKTGRLVTQTGLDLQQRAGFTVQAERL
        PDSLQNQDVLLPGQLIT+Y+KEKLEDWLQK KKLL+DE+S+ SKNF+F SLA VKKVMDKNPSKQISSA++NLLKTGRLVTQTGLDLQQRAGFTVQAERL
Subjt:  PDSLQNQDVLLPGQLITLYLKEKLEDWLQKAKKLLEDEVSNPSKNFEFSSLAHVKKVMDKNPSKQISSAVENLLKTGRLVTQTGLDLQQRAGFTVQAERL

Query:  NFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMG
        NFLRF+SHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDF+KIR SILSVLIAVGMIPSLPKLVQMG
Subjt:  NFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMG

Query:  PPDVLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSISGAYPGLYLFTSPSRFVRPVKNLSISTEDNHNIELIGPFEQVFMEIQ
        PPDVLNV+LDGRIVGYISS EVEK+VAHLR+LKVLSPHVIP+DLEVGYVPLSI GAYPGL+LFTSPSRFVRPV+NLSIS+E+N NIELIGPFEQVFMEI+
Subjt:  PPDVLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSISGAYPGLYLFTSPSRFVRPVKNLSISTEDNHNIELIGPFEQVFMEIQ

Query:  CPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNA
        CPDGGDGGRKDEFPATHEEIHPTGMLSVV NLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAI++RADQKLYHLQTPQTPIVRTSTY KYNIDEYPTGTNA
Subjt:  CPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNA

Query:  IVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMK
        IVAVLAYTGYDMEDAMILNKSSVERGM+HGQIYQTETIDLS+Q +RSSRSQK+FRRSNID SVRS ID+DGLPYVGQMI+PDEPYCSIYDEVAGTTR MK
Subjt:  IVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMK

Query:  LKGSEAVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLN
        LKGSE V VDYVSVDVKNK +PQKVNIRFR PRNP+IGDKFSSRHGQKGVCSQLWPDVDMPF GATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLN
Subjt:  LKGSEAVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLN

Query:  GEFVNATPFRSSVNKTNAGDEETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRK
        GEF+NATPF+SSV K NAGDEE+  E+LVDELGSTL+KKGFNYHG+EVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRK
Subjt:  GEFVNATPFRSSVNKTNAGDEETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRK

Query:  KGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAE
        KGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTS+ VQP KRAVREIGGLPPGKAPKRV CHACKTSKGMETVAMPYVFKYLAAE
Subjt:  KGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAE

Query:  LAAMNIKMTLQLSSGA
        LAAMNI+MTLQLS+ A
Subjt:  LAAMNIKMTLQLSSGA

SwissProt top hitse value%identityAlignment
B8JKD7 DNA-directed RNA polymerase I subunit RPA22.3e-24743.55Show/hide
Query:  LFPYECRQAKISYTGTVIRE-------------KFNFGQFPIML--KLCHLRGLDPK-------------NYFVMNGLERVVRLLIAPKRNYPMSMVRNS
        +FP ECR  + +Y   ++ +             K + GQ PIM+  KLC+L GL PK              YF++NG+E+V+RLLI P+RNYP+++ R  
Subjt:  LFPYECRQAKISYTGTVIRE-------------KFNFGQFPIML--KLCHLRGLDPK-------------NYFVMNGLERVVRLLIAPKRNYPMSMVRNS

Query:  FSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHGKSKGAVGTQLVGERAKIILD
        F  R +GYT  A+ +RCV+E+ +++ + L+YL NG+  + F  + + + LP+G  LKAL+D +D++IY  L        G+   +     V E  +I++D
Subjt:  FSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHGKSKGAVGTQLVGERAKIILD

Query:  EVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVHLDSNYDKFNLLIFMAQKLFSLIDQTSVADNPDSLQNQDVLLPGQLITLYLKE
        +     +    + L+++G+ F+  +           A  +L + + +HL ++ +KF +L  M +KLFS   Q  + +NPDS    +VL PGQL  ++LKE
Subjt:  EVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVHLDSNYDKFNLLIFMAQKLFSLIDQTSVADNPDSLQNQDVLLPGQLITLYLKE

Query:  KLEDWLQKAKKLLEDEVSNPSKNFEFSSLAHVKKVMDKNPSKQISSAVENLLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGLR
        K+E WL   K  LE       K      L         N    ++ A E LL TG L+++TGL + Q +G  V A++LNF+R++SHFR VHRGA+FA +R
Subjt:  KLEDWLQKAKKLLEDEVSNPSKNFEFSSLAHVKKVMDKNPSKQISSAVENLLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGLR

Query:  TTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMGPP-----DVLNVLLDGRIVGYI
        TTTVRKLLPESWGFLCPVHTPDGEPCGL+NH+T+ C I         V   Y   T         G++ SL      G P     D   V+LDG ++G++
Subjt:  TTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMGPP-----DVLNVLLDGRIVGYI

Query:  SSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVP-LSISGAYPGLYLFTSPSRFVRPVKNLSISTEDNHNIELIGPFEQVFMEIQCPDGGDGGRKDEFPAT
               ++  LRR KVL    +P   E+  VP    +  YPGLYLFT+P R VR V+NLS+  +     ELIG FEQV++ +    G      ++   T
Subjt:  SSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVP-LSISGAYPGLYLFTSPSRFVRPVKNLSISTEDNHNIELIGPFEQVFMEIQCPDGGDGGRKDEFPAT

Query:  HEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAM
        H+E+ P  MLSVVA   P+SDHNQSPRNMYQCQM+KQTM F L + +YR+D KLY LQTPQ+P+VR + Y  Y++D YP GTNAIVAV++YTGYDMEDAM
Subjt:  HEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAM

Query:  ILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMKLKGSEAVIVDYVSV--
        I+NKSS ERG  HG +Y+TE IDLS++         +F     D  V   +DADGLP++G +++  +P+        G +     K  E+ +VD + V  
Subjt:  ILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMKLKGSEAVIVDYVSV--

Query:  DVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLNGEFVNATPFRSSVN
        +       +++ +  R PRNP IGDKF+SRHGQKG+ S+LWP  DMPF   +GM PD++ NPH FPSRMTI ML+ES+A K   L+G   +ATPF  S  
Subjt:  DVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLNGEFVNATPFRSSVN

Query:  KTNAGDEETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRKKGGGIRFGEMERDS
              EE +A   ++  G  L   G+NY+G E LYSG+ G EL  +IFIG VYYQRLRHMVSDK+QVR+TG  D+VT QP+ GR   GGIRFGEMERD+
Subjt:  KTNAGDEETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRKKGGGIRFGEMERDS

Query:  MLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSSFVQPPKR--AVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAELAAMNIKMTLQL
        +LAHG S+LLHDRL  CSD  +A VC  CGS+L+    +PP    A R           ++  C  C  S  +ETV++PYVFKY  AELAAMNIK+ L +
Subjt:  MLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSSFVQPPKR--AVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAELAAMNIKMTLQL

F4I366 DNA-directed RNA polymerase I subunit 20.0e+0070.96Show/hide
Query:  LYPPQKERNLRTIR-EALFPYECRQAKISYTGT-------------VIREKFNFGQFPIML--KLCHLRGLDPK-------------NYFVMNGLERVVR
        ++ PQKE    T R E L P+ECRQAKISYTGT             V+R+KF+FGQFPIML  KLC L+G D +              YF++NG+ERV R
Subjt:  LYPPQKERNLRTIR-EALFPYECRQAKISYTGT-------------VIREKFNFGQFPIML--KLCHLRGLDPK-------------NYFVMNGLERVVR

Query:  LLIAPKRNYPMSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHGKSK
         +IAPKRN+P SM+RNSF DR+EGY+ KAVV RCVR+DQSSVTVKLYYLRNGSAR+GFW+ G+EYLLP+G+VLKAL ++ D EIY SL  CYS+ +G+  
Subjt:  LLIAPKRNYPMSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHGKSK

Query:  GAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVHLDSNYDKFNLLIFMAQKLFSLIDQTSVADNPDSLQ
        GA+GTQLV ERAKIILDEVRDL LF   QC  H+GQHFQPV++G+ KE  S VA+AVL+DY+FVHLD+++DKFNLLIF+ QKL+SL+DQTS+ DNPDSLQ
Subjt:  GAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVHLDSNYDKFNLLIFMAQKLFSLIDQTSVADNPDSLQ

Query:  NQDVLLPGQLITLYLKEKLEDWLQKAKKLLEDEVSNPSKNFEFSSLAHVKKVMDKNPSKQISSAVENLLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRF
        NQ++L+PG +IT+YLKEKLE+WL+K K LL+DE+ N +  F F SLA VKK+++KNP + I +++E LLKTG L TQ+GLDLQQRAG+TVQAERLNFLRF
Subjt:  NQDVLLPGQLITLYLKEKLEDWLQKAKKLLEDEVSNPSKNFEFSSLAHVKKVMDKNPSKQISSAVENLLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRF

Query:  VSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMGPPDVL
        +S FRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDG PCGLLNH+T T RITS F+S+G +RDF KIR S++ VL   GM+PSLPKLV+ GPP V+
Subjt:  VSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMGPPDVL

Query:  NVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSISGAYPGLYLFTSPSRFVRPVKNLSISTEDNHNIELIGPFEQVFMEIQCPDGG
        +VLLDG++VG +SSN V K+V+++RRLKV +P VIP+DLEVGYVP S+ G+YPGLYL + P+RF+RPVKN+SI ++   NIELIGPFEQVFMEI CPDGG
Subjt:  NVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSISGAYPGLYLFTSPSRFVRPVKNLSISTEDNHNIELIGPFEQVFMEIQCPDGG

Query:  DGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVL
        +GGR +   ATHEEIHPTGM+SVVANLTPWSDHNQSPRNMYQCQMAKQTMA+S QA+++RADQK+YHLQTPQ+P+VRT TYT Y+IDE PTGTNAIVAVL
Subjt:  DGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVL

Query:  AYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMKLKGSE
        A+TG+DMEDAMILNKSSVERGM HGQIYQTE IDLSDQ +R     K FRRS  + +    IDADGLP VGQ + PDEPYCSIYDEV   TR MK KG++
Subjt:  AYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMKLKGSE

Query:  AVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLNGEFVN
         VIVD+VSVD+K+K +PQ+ NIRFR  RNP+IGDKFSSRHGQKGVCSQLWPD+DMPF G TGMRPDLIINPHAFPSRMTIAML+ES+AAKGG L+G+FV+
Subjt:  AVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLNGEFVN

Query:  ATPFRSSVNKTNAGDEETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRKKGGGI
        ATPFR +V KTN G+EE+ +  LVD+LGS L +KGFN++G E LYSG  G EL CEIF+GPVYYQRLRHMVSDK+QVRSTG VDQ+T QPIKGRK+GGGI
Subjt:  ATPFRSSVNKTNAGDEETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRKKGGGI

Query:  RFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSSFVQ-PPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAELAAM
        RFGEMERDS+LAHGASYLLHDRLHT SDHHIADVCSLCGS+LTSS V    K+ ++EIG LPPG+ PK+VTC++CKTSKGMETVAMPYVF+YLAAELA+M
Subjt:  RFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSSFVQ-PPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAELAAM

Query:  NIKMTLQLS
        NIKMTLQLS
Subjt:  NIKMTLQLS

P70700 DNA-directed RNA polymerase I subunit RPA21.4e-24443.73Show/hide
Query:  LFPYECRQAKISYTGTVIRE-------------KFNFGQFPIML--KLCHLRGLDPK-------------NYFVMNGLERVVRLLIAPKRNYPMSMVRNS
        ++P ECR  K +Y G +  +             K   G  PIM+  KLC+L  L P+              YF++NG+E+V+R+LI P+RN+P++MVR  
Subjt:  LFPYECRQAKISYTGTVIRE-------------KFNFGQFPIML--KLCHLRGLDPK-------------NYFVMNGLERVVRLLIAPKRNYPMSMVRNS

Query:  FSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHGKSKGAVGTQLVGERAKIILD
        +  R  GYT   V +RCVRE+ S+V + L+Y+ NG+  L F  + + + LP+G  LKAL+  +D++I+  L        GK + +     V +  +I+++
Subjt:  FSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHGKSKGAVGTQLVGERAKIILD

Query:  EVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVHLDSNYDKFNLLIFMAQKLFSLIDQTSVADNPDSLQNQDVLLPGQLITLYLKE
        E         +Q L+++G+ F+  +           A+ +L   I +HL SN DKF LL  M +KLF+L     + DNPDSL NQ+VL PGQL  ++LKE
Subjt:  EVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVHLDSNYDKFNLLIFMAQKLFSLIDQTSVADNPDSLQNQDVLLPGQLITLYLKE

Query:  KLEDWLQKAKKLLEDEVSNPSKNFEFSSLAHVKKVMDKNPSKQISSAVENLLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGLR
        K+E+WL   K +L+      + +    +L  +  +       +++   E LL TG L ++TGL   Q +G  V A++LNFLR++SHFR VHRGA+FA +R
Subjt:  KLEDWLQKAKKLLEDEVSNPSKNFEFSSLAHVKKVMDKNPSKQISSAVENLLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGLR

Query:  TTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMGP----PDVLNVLLDGRIVGYIS
        TTTVR+LLPESWGFLCPVHTPDG PCGLLNHLT+ C + + F              SI ++L  +G+ P     V   P     D   VLLDG +VG++ 
Subjt:  TTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMGP----PDVLNVLLDGRIVGYIS

Query:  SNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLS-ISGAYPGLYLFTSPSRFVRPVKNLSISTEDNHNIELIGPFEQVFMEIQC-PDGGDGGRKDEFPAT
         +   ++   LRR KVL    IP  +EV  +P++     YPGL+LFT+P R VRPV+NL +  E     ELIG  EQ+FM +    D   GG      +T
Subjt:  SNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLS-ISGAYPGLYLFTSPSRFVRPVKNLSISTEDNHNIELIGPFEQVFMEIQC-PDGGDGGRKDEFPAT

Query:  HEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAM
        H+E+ P  +LSV+AN  P+SDHNQSPRNMYQCQM KQTM F L   + R+D KLY LQTPQ+P+VR   Y  Y++D YP GTNAIVAV++YTGYDMEDAM
Subjt:  HEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAM

Query:  ILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMKLKGSEAVIVDYVSVDV
        I+NK+S ERG  HG +Y++E IDLS++  +      +F     D  V   +D DGLP++G  ++  +PY S  +   G    +  K  E  +VD + V  
Subjt:  ILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMKLKGSEAVIVDYVSVDV

Query:  KNKNNP--QKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLNGEFVNATPFRSSVN
         +  +   + + I  R PRNP IGDKF+SRHGQKG+ S+LWP  DMPF   +GM PD++ NPH FPSRMTI ML+ES+A K   L+G   +ATPF  S  
Subjt:  KNKNNP--QKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLNGEFVNATPFRSSVN

Query:  KTNAGDEETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRKKGGGIRFGEMERDS
              EE +A   ++  G  L   G+N++G E LYSG+ G EL  +IFIG VYYQRLRHMVSDK+QVR+TG  D+VT QP+ GR   GGIRFGEMERD+
Subjt:  KTNAGDEETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRKKGGGIRFGEMERDS

Query:  MLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSSFVQPPK--RAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAELAAMNIKMTLQL
        +LAHG S+LLHDRL  CSD  +A +C  CGS+L+    +PP    A+R           ++  C  C  S  ++TV++PYVF+Y  AELAAMNIK+ L +
Subjt:  MLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSSFVQPPK--RAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAELAAMNIKMTLQL

Q9H9Y6 DNA-directed RNA polymerase I subunit RPA28.3e-24543.38Show/hide
Query:  ESELYPPQKERNLRTIREALFPYECRQAKISYTGTVIRE-------------KFNFGQFPIML--KLCHLRGLDPK-------------NYFVMNGLERV
        ++ + PP   +        ++P ECR  + +Y G +  +             K   G  PIM+  KLC+LR L P+              YF++NG+E+V
Subjt:  ESELYPPQKERNLRTIREALFPYECRQAKISYTGTVIRE-------------KFNFGQFPIML--KLCHLRGLDPK-------------NYFVMNGLERV

Query:  VRLLIAPKRNYPMSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHGK
        +R+LI P+RN+P++M+R  +  R  GYT   V + CVRE+ S+V + L+YL NG+  L F  + + + LP+G  LKAL+  +D++I+  L        GK
Subjt:  VRLLIAPKRNYPMSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHGK

Query:  SKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVHLDSNYDKFNLLIFMAQKLFSLIDQTSVADNPDS
           +     V +  +I+++E         +Q L+++G+ F+  +           A+ +    I +HL SN +KF +L  M +KLF+L     + DNPDS
Subjt:  SKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVHLDSNYDKFNLLIFMAQKLFSLIDQTSVADNPDS

Query:  LQNQDVLLPGQLITLYLKEKLEDWLQKAKKLLEDEVSNPSKNFEFSSLAHVKKVMDKNPSKQISSAVENLLKTGRLVTQTGLDLQQRAGFTVQAERLNFL
        L NQ+VL PGQL  ++LKEKLE WL   K   + +    S +    +L  +  +        ++   E L  TG L ++TGL L Q +G  V A++LNF+
Subjt:  LQNQDVLLPGQLITLYLKEKLEDWLQKAKKLLEDEVSNPSKNFEFSSLAHVKKVMDKNPSKQISSAVENLLKTGRLVTQTGLDLQQRAGFTVQAERLNFL

Query:  RFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMGPPD
        R++SHFR VHRGA FA +RTTTVR+LLPESWGFLCPVHTPDGEPCGL+NHLT+ C + + F              SI ++L  +G+ P +         +
Subjt:  RFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMGPPD

Query:  VLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLS-ISGAYPGLYLFTSPSRFVRPVKNLSISTEDNHNIELIGPFEQVFMEIQCP
           VLLDG +VG++  +    I   LR  KVL    IP  +EV  +P++     YPGL+LFT+P R VRPV+NL++  E     ELIG  EQ+FM +   
Subjt:  VLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLS-ISGAYPGLYLFTSPSRFVRPVKNLSISTEDNHNIELIGPFEQVFMEIQCP

Query:  DGGDGGRKDEFPA---THEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTN
               +DE  A   TH+E+ P  +LSV+AN  P+SDHNQSPRNMYQCQM KQTM F L   + R+D KLY LQTPQ+P+VR S Y  Y++D YP GTN
Subjt:  DGGDGGRKDEFPA---THEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTN

Query:  AIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTM
        AIVAV++YTGYDMEDAMI+NK+S ERG  HG +Y++E IDLS++  +   S  +F     D  V   +D DGLP++G  +Q  +PY S  +   G +  M
Subjt:  AIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTM

Query:  KLKGSEAVIVDYVSVDVKNKNNPQK---VNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKG
          K  E  +VD + V   N     K   V I  R PRNP IGDKF+SRHGQKG+ S+LWP  DMPF   +GM PD++ NPH FPSRMTI ML+ES+A K 
Subjt:  KLKGSEAVIVDYVSVDVKNKNNPQK---VNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKG

Query:  GCLNGEFVNATPFRSSVNKTNAGDEETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPI
          L+G   +ATPF  S        EE +A   ++  G  L   G+N++G E LYSG+ G EL  +IFIG VYYQRLRHMVSDK+QVR+TG  D+VT QPI
Subjt:  GCLNGEFVNATPFRSSVNKTNAGDEETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPI

Query:  KGRKKGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSSFVQPPK--RAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVF
         GR   GGIRFGEMERD++LAHG S+LLHDRL  CSD  +A VC  CGS+L+    +PP    A+R           ++  C  C  S  ++TV++PYVF
Subjt:  KGRKKGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSSFVQPPK--RAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVF

Query:  KYLAAELAAMNIKMTLQL
        +Y  AELAAMNIK+ L +
Subjt:  KYLAAELAAMNIKMTLQL

Q9P7X8 Probable DNA-directed RNA polymerase I subunit RPA22.5e-24942.76Show/hide
Query:  PPQKERNLRTIREALFPYECRQAKISYTGTVI-------------REKFNFGQFPIMLK--LCHLRGLDPK-------------NYFVMNGLERVVRLLI
        P    R   +I   ++P E R+   +Y   ++              E    G  PIM++   CHL GL P               YF++NG+E+++R+LI
Subjt:  PPQKERNLRTIREALFPYECRQAKISYTGTVI-------------REKFNFGQFPIMLK--LCHLRGLDPK-------------NYFVMNGLERVVRLLI

Query:  APKRNYPMSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHGKSKGAV
         PKRN+P +++R SF++R   Y+   + IRCVR DQSS+T  L+YL NG     F  +  EYL+P  ++LKAL++T+D EI+  +        GK    +
Subjt:  APKRNYPMSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHGKSKGAV

Query:  GTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFST-VADAVLKDYIFVHLDSNYDKFNLLIFMAQKLFSLIDQTSVADNPDSLQNQ
        G   + +R +++L   +   L+   + L ++G  F+ V+ G+ ++     V   +L+  + VHL    DKF LL+FM +KL++L+     ADNPDS Q+Q
Subjt:  GTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFST-VADAVLKDYIFVHLDSNYDKFNLLIFMAQKLFSLIDQTSVADNPDSLQNQ

Query:  DVLLPGQLITLYLKEKLEDWLQKAKKLLEDEVSNPSKNFEFSSLAHVKKVMDKNPSKQISSAVENLLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVS
        ++LL G L    LKEK+EDWL   +  +  +V   +   +FS   ++ +V  K  +  I + ++  L TG LV+ TGLDLQQ  G+TV AE+LNF RF+S
Subjt:  DVLLPGQLITLYLKEKLEDWLQKAKKLLEDEVSNPSKNFEFSSLAHVKKVMDKNPSKQISSAVENLLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVS

Query:  HFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLN-
        HFR VHRGA FA L+TTTVRKLLPE+WGF+CPVHTPDG PCGLLNHL   C I ++ +                     V  IPSL   + + PP V+  
Subjt:  HFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLN-

Query:  ------VLLDGRIVGYISSNEVEKIVAHLRRLKV-----------LSPHVIPDDLEVGYVPLSISGAYPGLYLFTSPSRFVRPVKNLSISTEDNHNIELI
              V LDG+IVG+ +    + +   LR +K+             P  +P DLE+GYVP S +G YPGLYLF++P+R VRPVK++S        ++++
Subjt:  ------VLLDGRIVGYISSNEVEKIVAHLRRLKV-----------LSPHVIPDDLEVGYVPLSISGAYPGLYLFTSPSRFVRPVKNLSISTEDNHNIELI

Query:  GPFEQVFMEIQCPDGGDGGRKDEFP--ATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYT
        GPFEQV+M+I C        K+  P  +TH E  PT +LS+VAN+TP+SD NQSPRNMYQCQM KQTM     A+RYR D KLY LQT QTP+VR   + 
Subjt:  GPFEQVFMEIQCPDGGDGGRKDEFP--ATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYT

Query:  KYNIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVR---SIIDADGLPYVGQMIQPDEP
         Y +D YP GTNA+VAV++YTGYDMEDAMILNKS+ ERG  +G +Y+ E+ DLS +  R       F  +   T  R     +DADGLP++G  ++  +P
Subjt:  KYNIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVR---SIIDADGLPYVGQMIQPDEP

Query:  YCSIYDEVAGTTRTMKLKGSEAVIVDYVSV---DVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPS
          + YDE  G        G+E   VD V +   DV   +  Q+++++ R  R+P+IGDKFSSRHGQKG+CSQ WP VDMPF   +GM+PD+IINPHAFPS
Subjt:  YCSIYDEVAGTTRTMKLKGSEAVIVDYVSV---DVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPS

Query:  RMTIAMLMESVAAKGGCLNGEFVNATPFRSSVNKTNAGDEETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQ
        RMTI M +ES+A K G  +G   ++TPF  S  +T A           D  G  L+K G+NYHG E +YSG+ G E+  +I+IG VYYQRLRHMVSDK+Q
Subjt:  RMTIAMLMESVAAKGGCLNGEFVNATPFRSSVNKTNAGDEETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQ

Query:  VRSTGTVDQVTRQPIKGRKKGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSSFVQPPKRAVREIGGLPPGKAPKRVTCHAC-K
        VR+TG +  +TRQP+KGRK+ GGIRFGEMERD+++ HG S+L+ DRL  CSD+  + VC  CGSI++          +  I     G A   V C +C K
Subjt:  VRSTGTVDQVTRQPIKGRKKGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSSFVQPPKRAVREIGGLPPGKAPKRVTCHAC-K

Query:  TSKGME---------------------TVAMPYVFKYLAAELAAMNIKMTLQL
         + G+E                      +A+P VF YL AEL AMNIKM L++
Subjt:  TSKGME---------------------TVAMPYVFKYLAAELAAMNIKMTLQL

Arabidopsis top hitse value%identityAlignment
AT1G29940.1 nuclear RNA polymerase A20.0e+0070.96Show/hide
Query:  LYPPQKERNLRTIR-EALFPYECRQAKISYTGT-------------VIREKFNFGQFPIML--KLCHLRGLDPK-------------NYFVMNGLERVVR
        ++ PQKE    T R E L P+ECRQAKISYTGT             V+R+KF+FGQFPIML  KLC L+G D +              YF++NG+ERV R
Subjt:  LYPPQKERNLRTIR-EALFPYECRQAKISYTGT-------------VIREKFNFGQFPIML--KLCHLRGLDPK-------------NYFVMNGLERVVR

Query:  LLIAPKRNYPMSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHGKSK
         +IAPKRN+P SM+RNSF DR+EGY+ KAVV RCVR+DQSSVTVKLYYLRNGSAR+GFW+ G+EYLLP+G+VLKAL ++ D EIY SL  CYS+ +G+  
Subjt:  LLIAPKRNYPMSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHGKSK

Query:  GAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVHLDSNYDKFNLLIFMAQKLFSLIDQTSVADNPDSLQ
        GA+GTQLV ERAKIILDEVRDL LF   QC  H+GQHFQPV++G+ KE  S VA+AVL+DY+FVHLD+++DKFNLLIF+ QKL+SL+DQTS+ DNPDSLQ
Subjt:  GAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVHLDSNYDKFNLLIFMAQKLFSLIDQTSVADNPDSLQ

Query:  NQDVLLPGQLITLYLKEKLEDWLQKAKKLLEDEVSNPSKNFEFSSLAHVKKVMDKNPSKQISSAVENLLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRF
        NQ++L+PG +IT+YLKEKLE+WL+K K LL+DE+ N +  F F SLA VKK+++KNP + I +++E LLKTG L TQ+GLDLQQRAG+TVQAERLNFLRF
Subjt:  NQDVLLPGQLITLYLKEKLEDWLQKAKKLLEDEVSNPSKNFEFSSLAHVKKVMDKNPSKQISSAVENLLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRF

Query:  VSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMGPPDVL
        +S FRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDG PCGLLNH+T T RITS F+S+G +RDF KIR S++ VL   GM+PSLPKLV+ GPP V+
Subjt:  VSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMGPPDVL

Query:  NVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSISGAYPGLYLFTSPSRFVRPVKNLSISTEDNHNIELIGPFEQVFMEIQCPDGG
        +VLLDG++VG +SSN V K+V+++RRLKV +P VIP+DLEVGYVP S+ G+YPGLYL + P+RF+RPVKN+SI ++   NIELIGPFEQVFMEI CPDGG
Subjt:  NVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSISGAYPGLYLFTSPSRFVRPVKNLSISTEDNHNIELIGPFEQVFMEIQCPDGG

Query:  DGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVL
        +GGR +   ATHEEIHPTGM+SVVANLTPWSDHNQSPRNMYQCQMAKQTMA+S QA+++RADQK+YHLQTPQ+P+VRT TYT Y+IDE PTGTNAIVAVL
Subjt:  DGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVL

Query:  AYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMKLKGSE
        A+TG+DMEDAMILNKSSVERGM HGQIYQTE IDLSDQ +R     K FRRS  + +    IDADGLP VGQ + PDEPYCSIYDEV   TR MK KG++
Subjt:  AYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMKLKGSE

Query:  AVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLNGEFVN
         VIVD+VSVD+K+K +PQ+ NIRFR  RNP+IGDKFSSRHGQKGVCSQLWPD+DMPF G TGMRPDLIINPHAFPSRMTIAML+ES+AAKGG L+G+FV+
Subjt:  AVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLNGEFVN

Query:  ATPFRSSVNKTNAGDEETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRKKGGGI
        ATPFR +V KTN G+EE+ +  LVD+LGS L +KGFN++G E LYSG  G EL CEIF+GPVYYQRLRHMVSDK+QVRSTG VDQ+T QPIKGRK+GGGI
Subjt:  ATPFRSSVNKTNAGDEETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRKKGGGI

Query:  RFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSSFVQ-PPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAELAAM
        RFGEMERDS+LAHGASYLLHDRLHT SDHHIADVCSLCGS+LTSS V    K+ ++EIG LPPG+ PK+VTC++CKTSKGMETVAMPYVF+YLAAELA+M
Subjt:  RFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSSFVQ-PPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAELAAM

Query:  NIKMTLQLS
        NIKMTLQLS
Subjt:  NIKMTLQLS

AT3G18090.1 nuclear RNA polymerase D2B4.4e-7628.6Show/hide
Query:  DAVLKDYIFVHLDSNYDKFNLLIFMAQKLFSLIDQTSVADNPDSLQNQDVLLPGQLITLYLKEKLEDWLQKAKKLLEDEVSNPSKNFEFSSLAHVKKVMD
        D  L+ Y+F  L     K   L +M + L S        +N DS +N+ + L G+L+   ++  L    +K  + ++ ++S          L  ++  +D
Subjt:  DAVLKDYIFVHLDSNYDKFNLLIFMAQKLFSLIDQTSVADNPDSLQNQDVLLPGQLITLYLKEKLEDWLQKAKKLLEDEVSNPSKNFEFSSLAHVKKVMD

Query:  KNPSKQISSAVENLLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCR
           +  I++ +     TG   +     +++ +G      R N L+ +   R   +   + G +    R   P  WG +C + TPDGE CGL+ +++    
Subjt:  KNPSKQISSAVENLLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCR

Query:  ITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSISGAYPG
        +    ++QG          S++ +L   GM   L             VLL+G  VG  + +  E  V  L+  +  S   +P ++E+             
Subjt:  ITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSISGAYPG

Query:  LYLFTSPSRFVRP---VKNLSISTEDNHN------------IELIGPFEQVFMEIQCPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRN
        + +FT   R +RP   V+NL    +D               +ELIG  E+   +     G     K+    TH E+  + +L V   + P+++H+   R 
Subjt:  LYLFTSPSRFVRP---VKNLSISTEDNHN------------IELIGPFEQVFMEIQCPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRN

Query:  MYQCQM-AKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQ---IYQTETIDL
        +YQ Q   +Q + FS      R D     L  PQ P+ +T        +    G NAIVAV  + GY+ ED++++NK+S+ERGMF  +    Y+ E +D 
Subjt:  MYQCQM-AKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQ---IYQTETIDL

Query:  SDQGNRSSRSQKM-FRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMKLKGSEAVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGD
         D   R    + + F ++         ++ DG P++G  +   +       E +G   ++KLK +E  IV  V +   N        +  R+ R+P +GD
Subjt:  SDQGNRSSRSQKM-FRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMKLKGSEAVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGD

Query:  KFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLNGEFVNATPFRSSVNKTNAGDEETNAETL-----VDELGS
        KFSS HGQKGV   L    + PF    G+ PD++INPHAFPSR T   L+E+  +KG         A P +     + A  + T   T      V E+  
Subjt:  KFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLNGEFVNATPFRSSVNKTNAGDEETNAETL-----VDELGS

Query:  TLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRKKGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDH
         L + GF+  G E +Y+G  G  +   IF+GP +YQRL HM  +K + R+TG V  +TRQP+  RK+ GGIRFGEMERD ++AHGAS  LH+RL T SD 
Subjt:  TLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRKKGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDH

Query:  HIADVCSLCGSILTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAELAAMNIKM
            +C  C +   ++ ++    + R+I G           C  C +S  +  V +PY  K L  EL +M I +
Subjt:  HIADVCSLCGSILTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAELAAMNIKM

AT3G23780.1 nuclear RNA polymerase D2A3.7e-7528.8Show/hide
Query:  DAVLKDYIFVHLDSNYDKFNLLIFMAQKLFSLIDQTSVADNPDSLQNQDVLLPGQLITLYLKEKLEDWLQKAKKLLEDEVSNPSKNFEFSSLAHVKKVMD
        D  L  Y+F  L S   K   L +M + L +        +N DS +N+ + L G+L+   ++  L    +K  + ++  +S          L  ++  +D
Subjt:  DAVLKDYIFVHLDSNYDKFNLLIFMAQKLFSLIDQTSVADNPDSLQNQDVLLPGQLITLYLKEKLEDWLQKAKKLLEDEVSNPSKNFEFSSLAHVKKVMD

Query:  KNPSKQISSAVENLLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCR
           +  I++ +     TG   +     +++ +G      R N L+ +   R   +   + G +    R   P  WG +C + TPDGE CGL+ +++    
Subjt:  KNPSKQISSAVENLLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCR

Query:  ITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQ--MGPPDVLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSISGAY
        +++            +   S++  L A GM   +        G      VLL+G  VG  + +  E  VA L+  +  S   +P ++E+           
Subjt:  ITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQ--MGPPDVLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSISGAY

Query:  PGLYLFTSPSRFVRP---VKNLSISTE------------DNHNIELIGPFEQVFMEIQCPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSP
          + +FT   R +RP   V+NL    +            D+  +ELIG  E+   +     G     K+    TH E+  + +L V   + P+++H+   
Subjt:  PGLYLFTSPSRFVRP---VKNLSISTE------------DNHNIELIGPFEQVFMEIQCPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSP

Query:  RNMYQCQM-AKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQ---IYQTETI
        R +YQ Q   +Q + FS      R D     L  PQ P+ +T        +    G NAIVAV  + GY+ ED++++NK+S+ERGMF  +    Y+ E +
Subjt:  RNMYQCQM-AKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQ---IYQTETI

Query:  DLSDQGNRSSRSQKM-FRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMKLKGSEAVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMI
        D  D   R    + + F +++        ++ DG P++G  +   +       E +G   ++KLK +E  IV  V +   N        +  R+ R+P +
Subjt:  DLSDQGNRSSRSQKM-FRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMKLKGSEAVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMI

Query:  GDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLNGEFVNATPFR---SSVNKTNAGDEETNAETL-VDELG
        GDKFSS HGQKGV   L    + PF    G+ PD++INPHAFPSR T   L+E+  +KG         A P +   SS   T      T   T  V E+ 
Subjt:  GDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLNGEFVNATPFR---SSVNKTNAGDEETNAETL-VDELG

Query:  STLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRKKGGGIRFGEMERDSMLAHGASYLLHDRLHTCSD
          L + GF+  G E +Y+G  G  +   IF+GP +YQRL HM  DK + R+TG V  +TRQP+  RK+ GGI+FGEMERD ++AHGAS  LH+RL T SD
Subjt:  STLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRKKGGGIRFGEMERDSMLAHGASYLLHDRLHTCSD

Query:  HHIADVCSLCGSILTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAELAAMNIKM
             +C  C +   ++ ++    + R+I G           C  C +S  +  V +PY  K L  EL +M I +
Subjt:  HHIADVCSLCGSILTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAELAAMNIKM

AT4G21710.1 DNA-directed RNA polymerase family protein3.0e-9328.13Show/hide
Query:  DPKNYFVMNGLERVVRLLIAPKRNYPMSMVRNSFSDRREGYTDKAVVIRCVREDQS--SVTVKLYYLRNGSARLGFWVQGKEYL----------LPIGVV
        D   YF++NG E+V  L+   K +     V       +  Y  +   +R + E+Q+    T+ +  L   SA+ G      +Y+          +PI +V
Subjt:  DPKNYFVMNGLERVVRLLIAPKRNYPMSMVRNSFSDRREGYTDKAVVIRCVREDQS--SVTVKLYYLRNGSARLGFWVQGKEYL----------LPIGVV

Query:  LKALIDTTDHEIYASLTSCYSDKHGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVHL----DS
         +AL    D +I   +   ++D          TQ++ E  +  L+E     + +    LD+IG+    V  G+ KEK    A  +L+  +  H+      
Subjt:  LKALIDTTDHEIYASLTSCYSDKHGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVHL----DS

Query:  NYDKFNLLIFMAQKLFSLIDQTSVADNPDSLQNQDVLLPGQLITLYLKEKLEDWLQKAKKLLEDEVSNPSK-NFEFSSLAHVKKVMDKNPSKQISSAVEN
           K     ++  +L          D+ D   N+ + L G L+    +       +  +  ++  V N  + N +F+  A           K I+S ++ 
Subjt:  NYDKFNLLIFMAQKLFSLIDQTSVADNPDSLQNQDVLLPGQLITLYLKEKLEDWLQKAKKLLEDEVSNPSK-NFEFSSLAHVKKVMDKNPSKQISSAVEN

Query:  LLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRIT----SY----F
         L TG            RAG +    RL +   +SH R ++      G +    R+L    WG +CP  TP+G+ CGL+ +L     IT    +Y    F
Subjt:  LLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRIT----SY----F

Query:  NSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSISGAYPGLYLFT
          +    +F +I  S++                    P    + ++G  VG     + + +V  LRRL+      +  + EVG V          L ++T
Subjt:  NSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSISGAYPGLYLFT

Query:  SPSRFVRP----------VKNLSI-------STEDN--HNIELIGPFEQVFME--------------IQCPDGGDGGRKDEFPATHEEIHPTGMLSVVAN
           R  RP          +K   I       S E++  H++   G  E +  E              +Q     +    + +  TH EIHP+ +L V A+
Subjt:  SPSRFVRP----------VKNLSI-------STEDN--HNIELIGPFEQVFME--------------IQCPDGGDGGRKDEFPATHEEIHPTGMLSVVAN

Query:  LTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQ
        + P+ DHNQSPRN YQ  M KQ M   +   ++R D   Y L  PQ P+V T      +  + P G NAIVA+  Y+GY+ ED++I+N+SS++RG F   
Subjt:  LTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQ

Query:  IYQT--------ETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCS-----IYDEVAGTT-------RTMKLKGSEAVIVDY
         +++         T+   D G     S    R  + D      +D DGL   G  +  ++           DE  G +        ++ L+ SE  +VD 
Subjt:  IYQT--------ETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCS-----IYDEVAGTT-------RTMKLKGSEAVIVDY

Query:  VSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLNGEFVNATPFRS
        V +   N +  + V +R R  R P IGDKFSSRHGQKG     +   DMP+    G+ PD+I+NPHA PSRMTI  L+E +  K     G+  +ATPF  
Subjt:  VSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLNGEFVNATPFRS

Query:  SVNKTNAGDEETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRKKGGGIRFGEME
                      +  VD +   L K G+   G E +Y+G  G  LT  IF+GP YYQRL+HMV DK   R  G V  +TRQP +GR + GG+RFGEME
Subjt:  SVNKTNAGDEETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRKKGGGIRFGEME

Query:  RDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAELAAMNI
        RD M+AHGA++ L +RL   SD +   VC +CG I  ++  +                      C  CK    +  V +PY  K L  EL +M I
Subjt:  RDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAELAAMNI

AT5G45140.1 nuclear RNA polymerase C23.2e-11128.79Show/hide
Query:  NLRTIREALFPYECRQAKISYTGTVI-----------------REKFNFGQFPIMLKLCH--LRG-------------LDPKNYFVMNGLERVVRLLIAP
        N+ T+ E + P+ CR A ++Y   +                  ++    G+ PIML+ C   L G             LDP  YF++ G E+V  LLI  
Subjt:  NLRTIREALFPYECRQAKISYTGTVI-----------------REKFNFGQFPIMLKLCH--LRG-------------LDPKNYFVMNGLERVVRLLIAP

Query:  KRNYPMSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHGKSKGAVGT
        +    +S  R      ++G  + +V         + +T     ++    ++  ++      +PI +VLKA+   +D EI                     
Subjt:  KRNYPMSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHGKSKGAVGT

Query:  QLVGERAKI------ILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVHL---DSNY-DKFNLLIFMAQKLFSLIDQTSVADN
        Q+VG   +        ++E     +   +Q LD++    + +  G   EK    A ++L+D    H+   D+N+  K   +  M +++   +      D+
Subjt:  QLVGERAKI------ILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVHL---DSNY-DKFNLLIFMAQKLFSLIDQTSVADN

Query:  PDSLQNQDVLLPGQLITLYLKEKLEDWLQKAKKLLEDEVSNP--SKNFEFSSLAHVKKVMDKNPSKQISSAVENLLKTGRLVTQTGLDLQQRAGFTVQAE
         D + N+ + L GQLI+L  ++  +  L +A K ++  ++ P  +  F+FS      + ++K+    IS  +E  L TG    +       R G T    
Subjt:  PDSLQNQDVLLPGQLITLYLKEKLEDWLQKAKKLLEDEVSNP--SKNFEFSSLAHVKKVMDKNPSKQISSAVENLLKTGRLVTQTGLDLQQRAGFTVQAE

Query:  RLNFLRFVSHFRAVHRGASFAGLRTTT-VRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLV
        RL+F+  +     +     F   R  +  R L P  WG LCP  TP+GE CGL+ +L     +T+       V   YK+  + L VL A           
Subjt:  RLNFLRFVSHFRAVHRGASFAGLRTTT-VRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLV

Query:  QMGPPDVLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVG-YVPLSISGAYPGLYLFTSPSRFVRP--VKNLSISTEDNHN---------
        ++  PD   V+L+G I+G    +  +     LRRL+           ++G +V +  +     +Y+ +   R  RP  + +  IS    H+         
Subjt:  QMGPPDVLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVG-YVPLSISGAYPGLYLFTSPSRFVRP--VKNLSISTEDNHN---------

Query:  ----------IELIGPFEQ--VFMEIQCPDG----GDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQK
                  IE +   E+    + +   DG     +G    +   TH EI P  +L VVA L P+  HNQSPRN YQC M KQ M         R D  
Subjt:  ----------IELIGPFEQ--VFMEIQCPDG----GDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQK

Query:  LYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMF-RRSNIDTSVRSIID
        LY L  PQ P++ T T      D+   G NA VAV++++GYD+EDA+++NKSS++RG F   I   + + +S + +  +  + +  +R+  D     I+D
Subjt:  LYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMF-RRSNIDTSVRSIID

Query:  ADGLPYVGQMIQPDEPYCSIYDEVAGTTR-TMKLKGS--------------EAVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQ
         DGL   G++I+P++ Y +    V   T+ T  L  S              E  +VD V++   +K     +    R  R P +GDKFSSRHGQKGVC  
Subjt:  ADGLPYVGQMIQPDEPYCSIYDEVAGTTR-TMKLKGS--------------EAVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQ

Query:  LWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLNGEFVNATPFRSSVNKTNAGDEETNAETLVDELGSTLIKKGFNYHGLEVLYSGV
        +    D PF    G+ PDLI+NPH FPSRMT+  ++E + +K G   G F   + F         G+   +A+  V+ + +TL++KGF+Y G ++LYSG+
Subjt:  LWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLNGEFVNATPFRSSVNKTNAGDEETNAETLVDELGSTLIKKGFNYHGLEVLYSGV

Query:  YGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRKKGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSSFVQ
         G  +   IF+GP+YYQ+L+HMV DK   R +G    +TRQP +G+ K GG+R GEMERD ++A+GAS L+++RL   SD     VC  CG  L   +  
Subjt:  YGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRKKGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSSFVQ

Query:  PPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAELAAMNIKMTLQLS
          K+AV                C  CK    + T+ +PY  K L  EL +MN+   L+L+
Subjt:  PPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAELAAMNIKMTLQLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGTTGCGTGCTCACACAGTCGTACGCGCCTATGGCTAAGCACTGCGCTACACGCCTTCGTGCTGATGAGACGTAGATGGAGCTCTCTGTTACATCTCTCACCTTG
TTTTCTCTCTTTGCAAGCTATGAAATTGGAGTTTATGAATGAGTCCGAGTTATACCCACCACAGAAGGAGCGCAATTTGAGAACAATTCGGGAAGCTCTTTTTCCTTATG
AATGTAGGCAAGCTAAAATTTCCTATACCGGAACTGTCATAAGAGAGAAGTTTAACTTTGGGCAATTCCCAATAATGCTGAAGCTTTGTCACTTGAGAGGTCTTGATCCC
AAGAATTATTTCGTTATGAATGGGCTGGAGAGAGTTGTTCGGCTTTTGATAGCACCCAAACGAAACTATCCAATGAGTATGGTGAGGAATTCATTTTCTGATCGACGGGA
AGGTTATACTGATAAAGCAGTGGTTATAAGGTGTGTAAGAGAAGATCAATCTTCAGTAACAGTCAAATTATATTATCTTAGGAATGGAAGTGCCAGACTTGGATTTTGGG
TTCAGGGAAAGGAGTACTTGCTTCCCATCGGGGTCGTCCTAAAGGCCCTAATTGATACAACCGACCATGAAATATATGCAAGTCTGACAAGCTGTTATAGTGACAAACAT
GGAAAGAGTAAGGGTGCTGTTGGAACTCAGCTTGTTGGTGAAAGGGCAAAGATTATTCTTGATGAAGTTCGAGACCTGGCACTTTTTGATCACCGTCAATGTCTAGATCA
TATAGGACAACACTTCCAGCCAGTCATGGAGGGGCTGGGAAAAGAAAAATTCTCTACTGTTGCAGATGCAGTTCTTAAAGACTACATATTTGTTCACCTTGACAGCAATT
ATGACAAGTTCAATCTGCTTATTTTTATGGCACAGAAACTTTTCTCCCTTATAGATCAGACTTCTGTAGCTGACAACCCCGATTCCTTGCAGAACCAGGACGTTCTGCTA
CCTGGTCAGCTAATTACTCTTTATCTCAAGGAGAAACTGGAAGATTGGTTGCAAAAGGCGAAAAAGCTTCTTGAAGATGAAGTTAGTAATCCCAGCAAAAATTTTGAATT
CTCCAGCTTAGCTCATGTCAAGAAGGTCATGGACAAGAATCCATCAAAGCAGATTAGTTCAGCTGTCGAAAATTTGTTGAAAACTGGAAGACTCGTTACACAAACTGGCC
TAGATCTGCAGCAGAGAGCAGGCTTTACAGTTCAGGCAGAGCGGCTTAATTTCTTGCGCTTTGTGTCTCATTTTCGTGCTGTTCATCGTGGAGCTTCCTTTGCTGGACTT
CGCACTACAACTGTGCGGAAATTGCTACCTGAGTCTTGGGGTTTTCTTTGTCCAGTACACACTCCTGATGGTGAACCATGCGGCTTGCTGAATCATTTAACCAGCACCTG
CAGAATTACGTCATACTTCAATTCTCAAGGAAAAGTTCGAGACTTTTACAAAATAAGGACATCTATTCTGAGTGTTCTAATTGCAGTTGGAATGATACCGTCACTACCGA
AGCTTGTTCAAATGGGTCCTCCTGATGTTCTTAATGTTCTTTTAGATGGTCGCATCGTTGGTTATATATCATCCAATGAAGTAGAGAAAATTGTTGCTCATTTACGTCGA
TTAAAAGTTTTATCTCCCCATGTGATTCCCGACGATCTGGAAGTTGGATATGTACCTTTGAGTATAAGTGGAGCATATCCTGGTTTATACCTTTTCACATCTCCTTCTAG
ATTTGTCCGACCAGTTAAAAATCTTTCAATCTCCACTGAGGATAATCACAATATTGAACTCATTGGCCCATTTGAACAGGTATTTATGGAAATACAATGCCCTGATGGGG
GTGATGGTGGGAGGAAAGATGAGTTTCCTGCGACACATGAAGAAATCCATCCAACTGGGATGCTCAGTGTGGTTGCCAATCTTACCCCGTGGTCTGATCACAATCAGAGC
CCACGTAATATGTACCAATGCCAGATGGCAAAACAAACAATGGCATTCTCCCTGCAAGCTATTCGGTACCGTGCAGATCAAAAGCTATACCATCTTCAGACTCCTCAAAC
CCCTATTGTTCGTACAAGTACATATACGAAATACAACATAGATGAATATCCAACTGGCACAAACGCAATAGTGGCAGTGTTGGCATATACTGGTTATGACATGGAGGATG
CGATGATTCTGAACAAGTCCTCTGTGGAGCGTGGAATGTTCCATGGACAAATATATCAGACAGAAACTATTGACTTGTCTGATCAGGGCAATAGATCAAGTCGAAGTCAG
AAGATGTTTAGGAGGAGTAATATTGATACATCTGTGCGATCTATCATAGATGCAGATGGGCTTCCTTATGTTGGTCAGATGATACAACCAGATGAGCCTTATTGTAGCAT
TTATGATGAGGTGGCTGGCACAACCAGAACCATGAAACTTAAAGGTTCAGAAGCTGTTATTGTTGATTATGTGTCTGTTGATGTAAAGAATAAGAATAACCCTCAAAAGG
TGAATATACGCTTCCGACGCCCTCGGAACCCAATGATTGGAGATAAATTTAGTAGTAGACATGGGCAGAAAGGTGTTTGCTCCCAACTATGGCCAGATGTTGATATGCCA
TTTTGTGGAGCTACAGGAATGCGCCCGGATTTGATTATCAATCCCCATGCTTTTCCTTCAAGAATGACAATAGCAATGTTGATGGAGTCTGTCGCTGCGAAGGGAGGATG
TTTAAATGGAGAGTTTGTTAATGCAACACCGTTTAGGAGTTCTGTAAACAAAACGAATGCTGGAGACGAAGAGACAAACGCCGAGACACTTGTTGATGAACTTGGCTCCA
CGTTAATTAAAAAGGGATTTAATTACCATGGTCTTGAGGTATTGTACAGCGGAGTTTATGGAACAGAGCTAACATGTGAAATTTTTATTGGACCGGTATATTATCAGCGT
CTTCGGCACATGGTTTCTGACAAATATCAGGTTCGTTCCACTGGAACTGTGGATCAAGTTACTCGGCAACCCATCAAAGGTAGAAAAAAGGGTGGTGGTATACGTTTTGG
TGAAATGGAGCGCGACTCAATGCTAGCACATGGAGCATCGTACTTGTTACATGATAGGCTTCATACATGTTCTGATCATCACATTGCTGATGTATGTTCACTCTGCGGCA
GCATTCTAACATCATCCTTCGTCCAGCCCCCAAAGCGTGCTGTGCGTGAAATAGGCGGGCTCCCCCCTGGGAAGGCTCCTAAAAGGGTTACATGTCATGCTTGCAAAACA
AGTAAAGGTATGGAGACAGTAGCGATGCCTTACGTCTTCAAGTACTTGGCTGCAGAGTTGGCAGCGATGAACATAAAAATGACTCTCCAACTAAGTAGTGGAGCAGCCTG
A
mRNA sequenceShow/hide mRNA sequence
ATGCTTGTTGCGTGCTCACACAGTCGTACGCGCCTATGGCTAAGCACTGCGCTACACGCCTTCGTGCTGATGAGACGTAGATGGAGCTCTCTGTTACATCTCTCACCTTG
TTTTCTCTCTTTGCAAGCTATGAAATTGGAGTTTATGAATGAGTCCGAGTTATACCCACCACAGAAGGAGCGCAATTTGAGAACAATTCGGGAAGCTCTTTTTCCTTATG
AATGTAGGCAAGCTAAAATTTCCTATACCGGAACTGTCATAAGAGAGAAGTTTAACTTTGGGCAATTCCCAATAATGCTGAAGCTTTGTCACTTGAGAGGTCTTGATCCC
AAGAATTATTTCGTTATGAATGGGCTGGAGAGAGTTGTTCGGCTTTTGATAGCACCCAAACGAAACTATCCAATGAGTATGGTGAGGAATTCATTTTCTGATCGACGGGA
AGGTTATACTGATAAAGCAGTGGTTATAAGGTGTGTAAGAGAAGATCAATCTTCAGTAACAGTCAAATTATATTATCTTAGGAATGGAAGTGCCAGACTTGGATTTTGGG
TTCAGGGAAAGGAGTACTTGCTTCCCATCGGGGTCGTCCTAAAGGCCCTAATTGATACAACCGACCATGAAATATATGCAAGTCTGACAAGCTGTTATAGTGACAAACAT
GGAAAGAGTAAGGGTGCTGTTGGAACTCAGCTTGTTGGTGAAAGGGCAAAGATTATTCTTGATGAAGTTCGAGACCTGGCACTTTTTGATCACCGTCAATGTCTAGATCA
TATAGGACAACACTTCCAGCCAGTCATGGAGGGGCTGGGAAAAGAAAAATTCTCTACTGTTGCAGATGCAGTTCTTAAAGACTACATATTTGTTCACCTTGACAGCAATT
ATGACAAGTTCAATCTGCTTATTTTTATGGCACAGAAACTTTTCTCCCTTATAGATCAGACTTCTGTAGCTGACAACCCCGATTCCTTGCAGAACCAGGACGTTCTGCTA
CCTGGTCAGCTAATTACTCTTTATCTCAAGGAGAAACTGGAAGATTGGTTGCAAAAGGCGAAAAAGCTTCTTGAAGATGAAGTTAGTAATCCCAGCAAAAATTTTGAATT
CTCCAGCTTAGCTCATGTCAAGAAGGTCATGGACAAGAATCCATCAAAGCAGATTAGTTCAGCTGTCGAAAATTTGTTGAAAACTGGAAGACTCGTTACACAAACTGGCC
TAGATCTGCAGCAGAGAGCAGGCTTTACAGTTCAGGCAGAGCGGCTTAATTTCTTGCGCTTTGTGTCTCATTTTCGTGCTGTTCATCGTGGAGCTTCCTTTGCTGGACTT
CGCACTACAACTGTGCGGAAATTGCTACCTGAGTCTTGGGGTTTTCTTTGTCCAGTACACACTCCTGATGGTGAACCATGCGGCTTGCTGAATCATTTAACCAGCACCTG
CAGAATTACGTCATACTTCAATTCTCAAGGAAAAGTTCGAGACTTTTACAAAATAAGGACATCTATTCTGAGTGTTCTAATTGCAGTTGGAATGATACCGTCACTACCGA
AGCTTGTTCAAATGGGTCCTCCTGATGTTCTTAATGTTCTTTTAGATGGTCGCATCGTTGGTTATATATCATCCAATGAAGTAGAGAAAATTGTTGCTCATTTACGTCGA
TTAAAAGTTTTATCTCCCCATGTGATTCCCGACGATCTGGAAGTTGGATATGTACCTTTGAGTATAAGTGGAGCATATCCTGGTTTATACCTTTTCACATCTCCTTCTAG
ATTTGTCCGACCAGTTAAAAATCTTTCAATCTCCACTGAGGATAATCACAATATTGAACTCATTGGCCCATTTGAACAGGTATTTATGGAAATACAATGCCCTGATGGGG
GTGATGGTGGGAGGAAAGATGAGTTTCCTGCGACACATGAAGAAATCCATCCAACTGGGATGCTCAGTGTGGTTGCCAATCTTACCCCGTGGTCTGATCACAATCAGAGC
CCACGTAATATGTACCAATGCCAGATGGCAAAACAAACAATGGCATTCTCCCTGCAAGCTATTCGGTACCGTGCAGATCAAAAGCTATACCATCTTCAGACTCCTCAAAC
CCCTATTGTTCGTACAAGTACATATACGAAATACAACATAGATGAATATCCAACTGGCACAAACGCAATAGTGGCAGTGTTGGCATATACTGGTTATGACATGGAGGATG
CGATGATTCTGAACAAGTCCTCTGTGGAGCGTGGAATGTTCCATGGACAAATATATCAGACAGAAACTATTGACTTGTCTGATCAGGGCAATAGATCAAGTCGAAGTCAG
AAGATGTTTAGGAGGAGTAATATTGATACATCTGTGCGATCTATCATAGATGCAGATGGGCTTCCTTATGTTGGTCAGATGATACAACCAGATGAGCCTTATTGTAGCAT
TTATGATGAGGTGGCTGGCACAACCAGAACCATGAAACTTAAAGGTTCAGAAGCTGTTATTGTTGATTATGTGTCTGTTGATGTAAAGAATAAGAATAACCCTCAAAAGG
TGAATATACGCTTCCGACGCCCTCGGAACCCAATGATTGGAGATAAATTTAGTAGTAGACATGGGCAGAAAGGTGTTTGCTCCCAACTATGGCCAGATGTTGATATGCCA
TTTTGTGGAGCTACAGGAATGCGCCCGGATTTGATTATCAATCCCCATGCTTTTCCTTCAAGAATGACAATAGCAATGTTGATGGAGTCTGTCGCTGCGAAGGGAGGATG
TTTAAATGGAGAGTTTGTTAATGCAACACCGTTTAGGAGTTCTGTAAACAAAACGAATGCTGGAGACGAAGAGACAAACGCCGAGACACTTGTTGATGAACTTGGCTCCA
CGTTAATTAAAAAGGGATTTAATTACCATGGTCTTGAGGTATTGTACAGCGGAGTTTATGGAACAGAGCTAACATGTGAAATTTTTATTGGACCGGTATATTATCAGCGT
CTTCGGCACATGGTTTCTGACAAATATCAGGTTCGTTCCACTGGAACTGTGGATCAAGTTACTCGGCAACCCATCAAAGGTAGAAAAAAGGGTGGTGGTATACGTTTTGG
TGAAATGGAGCGCGACTCAATGCTAGCACATGGAGCATCGTACTTGTTACATGATAGGCTTCATACATGTTCTGATCATCACATTGCTGATGTATGTTCACTCTGCGGCA
GCATTCTAACATCATCCTTCGTCCAGCCCCCAAAGCGTGCTGTGCGTGAAATAGGCGGGCTCCCCCCTGGGAAGGCTCCTAAAAGGGTTACATGTCATGCTTGCAAAACA
AGTAAAGGTATGGAGACAGTAGCGATGCCTTACGTCTTCAAGTACTTGGCTGCAGAGTTGGCAGCGATGAACATAAAAATGACTCTCCAACTAAGTAGTGGAGCAGCCTG
A
Protein sequenceShow/hide protein sequence
MLVACSHSRTRLWLSTALHAFVLMRRRWSSLLHLSPCFLSLQAMKLEFMNESELYPPQKERNLRTIREALFPYECRQAKISYTGTVIREKFNFGQFPIMLKLCHLRGLDP
KNYFVMNGLERVVRLLIAPKRNYPMSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKH
GKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVHLDSNYDKFNLLIFMAQKLFSLIDQTSVADNPDSLQNQDVLL
PGQLITLYLKEKLEDWLQKAKKLLEDEVSNPSKNFEFSSLAHVKKVMDKNPSKQISSAVENLLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGL
RTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVLLDGRIVGYISSNEVEKIVAHLRR
LKVLSPHVIPDDLEVGYVPLSISGAYPGLYLFTSPSRFVRPVKNLSISTEDNHNIELIGPFEQVFMEIQCPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQS
PRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQ
KMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMKLKGSEAVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMP
FCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLNGEFVNATPFRSSVNKTNAGDEETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQR
LRHMVSDKYQVRSTGTVDQVTRQPIKGRKKGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSILTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKT
SKGMETVAMPYVFKYLAAELAAMNIKMTLQLSSGAA