; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0027852 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027852
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionU6 snRNA phosphodiesterase
Genome locationchr09:3665735..3669824
RNA-Seq ExpressionPI0027852
SyntenyPI0027852
Gene Ontology termsGO:0034477 - U6 snRNA 3'-end processing (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:1990838 - poly(U)-specific exoribonuclease activity, producing 3' uridine cyclic phosphate ends (molecular function)
InterPro domainsIPR027521 - U6 snRNA phosphodiesterase Usb1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143673.1 U6 snRNA phosphodiesterase [Cucumis sativus]1.5e-15093.52Show/hide
Query:  MDALRASYGGSSSDEEVDTVSPSSASTSASTSTPQFFDETVSFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVSIPTNARK
        MDALRASYGGSSSDEEVDTVSP SASTSA    PQF DETV+FLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPV +PTNARK
Subjt:  MDALRASYGGSSSDEEVDTVSPSSASTSASTSTPQFFDETVSFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVSIPTNARK

Query:  EAALFMKKVSSLVPALHLVDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEII
        E ALFMKK+SSLVPALHLVDIDIPLDVLCKDD KLEQA AREFHISLSRTVPIRVHQIDSIVTMLRQKLQS RRYWIDFSKWETFVNDDLSRTFLSMEII
Subjt:  EAALFMKKVSSLVPALHLVDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEII

Query:  TGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQLLSQAVHNELKRSAVKDPLKRCIFTTKFNGIECKIGKKMYKICKIPDE
        TGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHIS+AWALGDVSQL SQAVHNELKRSAVK+P KRCIFTTKFNGIECKIGKKMYKICK PDE
Subjt:  TGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQLLSQAVHNELKRSAVKDPLKRCIFTTKFNGIECKIGKKMYKICKIPDE

XP_008467330.1 PREDICTED: U6 snRNA phosphodiesterase [Cucumis melo]3.5e-15294.54Show/hide
Query:  MDALRASYGGSSSDEEVDTVSPSSASTSASTSTPQFFDETVSFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVSIPTNARK
        MDALRASYGGSSSDEEVDTVSPS    SASTSTPQFFDETVS LPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPV +PTNARK
Subjt:  MDALRASYGGSSSDEEVDTVSPSSASTSASTSTPQFFDETVSFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVSIPTNARK

Query:  EAALFMKKVSSLVPALHLVDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEII
        E ALFMKK+SSLVPALHLVDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQS RRYWIDFSKWETFVNDDLSRTFLSMEII
Subjt:  EAALFMKKVSSLVPALHLVDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEII

Query:  TGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQLLSQAVHNELKRSAVKDPLKRCIFTTKFNGIECKIGKKMYKICKIPDE
        TGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQ+ SQAVHNELKRSAVK+P KRCIFTTKFNGIECKIGKKMYKICK  DE
Subjt:  TGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQLLSQAVHNELKRSAVKDPLKRCIFTTKFNGIECKIGKKMYKICKIPDE

XP_022969741.1 U6 snRNA phosphodiesterase [Cucurbita maxima]1.7e-13885.52Show/hide
Query:  MDALRASYGGSSSDEEVDTVSPSSASTSASTST----PQFFDETVSFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVSIPT
        M+AL ASYGGSSSDE+ DTVSPSSAS SAS S     PQ  DET SFLPLPPPPLSLL+FPNST  LDDLPI QA RVRSFPHVQGNYA+H+YIPV IPT
Subjt:  MDALRASYGGSSSDEEVDTVSPSSASTSASTST----PQFFDETVSFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVSIPT

Query:  NARKEAALFMKKVSSLVPALHLVDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLS
        NARKE ALF+KK+S LVPALHLVDIDIPLD+LCKDD KLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLS
Subjt:  NARKEAALFMKKVSSLVPALHLVDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLS

Query:  MEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQLLSQAVHNELKRSAVKDPLKRCIFTTKFNGIECKIGKKMYKICKIPDE
        MEII GGLMEIRK+IQVVNEVYKLHNLPEFYKEARPHISLAWALGD+S+LLSQ+VH+E+K+S VK+  KRCIFT KFNGIECKIGKKM+KICK PDE
Subjt:  MEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQLLSQAVHNELKRSAVKDPLKRCIFTTKFNGIECKIGKKMYKICKIPDE

XP_023549871.1 U6 snRNA phosphodiesterase [Cucurbita pepo subsp. pepo]2.8e-14187.03Show/hide
Query:  MDALRASYGGSSSDEEVDTVSPSSASTSASTSTPQFFDETVSFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVSIPTNARK
        M+AL ASYGGSSSDE+VDTVSPSSAS SAS S PQ  DET SFLPLPPPPLSLL+FPNST  LDDLPI QA RVRSFPHVQGNYA+H+YIPV IPTNARK
Subjt:  MDALRASYGGSSSDEEVDTVSPSSASTSASTSTPQFFDETVSFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVSIPTNARK

Query:  EAALFMKKVSSLVPALHLVDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEII
        E ALF+KK+S LVPALHLVDIDIPLD+LCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEII
Subjt:  EAALFMKKVSSLVPALHLVDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEII

Query:  TGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQLLSQAVHNELKRSAVKDPLKRCIFTTKFNGIECKIGKKMYKICKIPDE
         GGLMEIRK IQVVNEVYKLHNLPEFYKE RPHISLAWALGD+S+LLSQ+VH+E+K+S VK+  KRCIFT KFNGIECKIGKKM+KICK PDE
Subjt:  TGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQLLSQAVHNELKRSAVKDPLKRCIFTTKFNGIECKIGKKMYKICKIPDE

XP_038875354.1 U6 snRNA phosphodiesterase isoform X1 [Benincasa hispida]4.1e-14589.76Show/hide
Query:  MDALRASYGGSSSDEEVDTVSPSSASTSASTSTPQFFDETVSFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVSIPTNARK
        MDALRASYGGSSSDEE DTVSPSSASTSA  STPQ  DETVSFLPLPPP  SLL+FPNST +LDDLPIDQATRVRSFPHVQGNYALH+YIPV +PTN RK
Subjt:  MDALRASYGGSSSDEEVDTVSPSSASTSASTSTPQFFDETVSFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVSIPTNARK

Query:  EAALFMKKVSSLVPALHLVDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEII
        E ALF+KKVSSLVPALHLVDID+PLDVLCKDDHKLEQALAREFH+SLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEII
Subjt:  EAALFMKKVSSLVPALHLVDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEII

Query:  TGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQLLSQAVHNELKRSAVKDPLKRCIFTTKFNGIECKIGKKMYKICKIPDE
        TGGLMEIRKQIQ+VNEVYKLHNLPEFYKEARPHISLAWA+GD+S+LLSQAVHNE+K SAV   LKRCIFTTKF GIECKIGKK+YKICK PDE
Subjt:  TGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQLLSQAVHNELKRSAVKDPLKRCIFTTKFNGIECKIGKKMYKICKIPDE

TrEMBL top hitse value%identityAlignment
A0A0A0KPH5 U6 snRNA phosphodiesterase7.1e-15193.52Show/hide
Query:  MDALRASYGGSSSDEEVDTVSPSSASTSASTSTPQFFDETVSFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVSIPTNARK
        MDALRASYGGSSSDEEVDTVSP SASTSA    PQF DETV+FLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPV +PTNARK
Subjt:  MDALRASYGGSSSDEEVDTVSPSSASTSASTSTPQFFDETVSFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVSIPTNARK

Query:  EAALFMKKVSSLVPALHLVDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEII
        E ALFMKK+SSLVPALHLVDIDIPLDVLCKDD KLEQA AREFHISLSRTVPIRVHQIDSIVTMLRQKLQS RRYWIDFSKWETFVNDDLSRTFLSMEII
Subjt:  EAALFMKKVSSLVPALHLVDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEII

Query:  TGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQLLSQAVHNELKRSAVKDPLKRCIFTTKFNGIECKIGKKMYKICKIPDE
        TGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHIS+AWALGDVSQL SQAVHNELKRSAVK+P KRCIFTTKFNGIECKIGKKMYKICK PDE
Subjt:  TGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQLLSQAVHNELKRSAVKDPLKRCIFTTKFNGIECKIGKKMYKICKIPDE

A0A1S3CTB0 U6 snRNA phosphodiesterase1.7e-15294.54Show/hide
Query:  MDALRASYGGSSSDEEVDTVSPSSASTSASTSTPQFFDETVSFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVSIPTNARK
        MDALRASYGGSSSDEEVDTVSPS    SASTSTPQFFDETVS LPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPV +PTNARK
Subjt:  MDALRASYGGSSSDEEVDTVSPSSASTSASTSTPQFFDETVSFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVSIPTNARK

Query:  EAALFMKKVSSLVPALHLVDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEII
        E ALFMKK+SSLVPALHLVDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQS RRYWIDFSKWETFVNDDLSRTFLSMEII
Subjt:  EAALFMKKVSSLVPALHLVDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEII

Query:  TGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQLLSQAVHNELKRSAVKDPLKRCIFTTKFNGIECKIGKKMYKICKIPDE
        TGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQ+ SQAVHNELKRSAVK+P KRCIFTTKFNGIECKIGKKMYKICK  DE
Subjt:  TGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQLLSQAVHNELKRSAVKDPLKRCIFTTKFNGIECKIGKKMYKICKIPDE

A0A6J1DNL4 U6 snRNA phosphodiesterase5.5e-11976.79Show/hide
Query:  MDALRASYGGSSSDEEVDTVSPSSASTSASTSTPQFFDETVSFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVSIPTNARK
        MDAL+ASY GSSSDEE D VS + +  S     P           LPPPPLSLL+FPNS   L DLPI Q TR RSFPHV+GNYALHVYIPV IPT ++K
Subjt:  MDALRASYGGSSSDEEVDTVSPSSASTSASTSTPQFFDETVSFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVSIPTNARK

Query:  EAALFMKKVSSLVPALHLVDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEII
        E  LF+KKVSSLVP+LHLVDID+PL  LCKD+HKLEQALAREFHISLSRTVPIRVHQIDSIV+MLRQKLQ QRRYWIDFSKWETFVNDDLSRTFLSMEII
Subjt:  EAALFMKKVSSLVPALHLVDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEII

Query:  TGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQLLSQAVHNELKRSAVKDPLKRCIFTTKFNGIECKIGKKMYKICKIPDE
         GGLMEIRKQIQVVNEVYK HNLPEFYKE RPHISLAWALGD+S+LLS+ V +++KRS++  P KRCIFTTKF+GIECKIGKK YKICK PDE
Subjt:  TGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQLLSQAVHNELKRSAVKDPLKRCIFTTKFNGIECKIGKKMYKICKIPDE

A0A6J1EQH7 U6 snRNA phosphodiesterase4.0e-13886.35Show/hide
Query:  MDALRASYGGSSSDEEVDTVSPSSASTSASTSTPQFFDETVSFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVSIPTNARK
        M+AL ASYGGSSSDE+VDTVSPSSA  SAS S PQ  DET SFLPLPPPPLSLL+FPNST  LDDLPI QA RVRSFPHVQGNYALH+YIPV I TNARK
Subjt:  MDALRASYGGSSSDEEVDTVSPSSASTSASTSTPQFFDETVSFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVSIPTNARK

Query:  EAALFMKKVSSLVPALHLVDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEII
        E ALF+KK+S LVPALHLVDIDIPLD+LCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEII
Subjt:  EAALFMKKVSSLVPALHLVDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEII

Query:  TGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQLLSQAVHNELKRSAVKDPLKRCIFTTKFNGIECKIGKKMYKICKIPDE
         GGLMEIRK IQVVNEVYKLHNLPEFYKE RPHISLAWALGD+S+LLSQ+VH+E+K+S VK+  KR IFT KFNGIECKIGKKM+KICK PDE
Subjt:  TGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQLLSQAVHNELKRSAVKDPLKRCIFTTKFNGIECKIGKKMYKICKIPDE

A0A6J1HYN3 U6 snRNA phosphodiesterase8.1e-13985.52Show/hide
Query:  MDALRASYGGSSSDEEVDTVSPSSASTSASTST----PQFFDETVSFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVSIPT
        M+AL ASYGGSSSDE+ DTVSPSSAS SAS S     PQ  DET SFLPLPPPPLSLL+FPNST  LDDLPI QA RVRSFPHVQGNYA+H+YIPV IPT
Subjt:  MDALRASYGGSSSDEEVDTVSPSSASTSASTST----PQFFDETVSFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVSIPT

Query:  NARKEAALFMKKVSSLVPALHLVDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLS
        NARKE ALF+KK+S LVPALHLVDIDIPLD+LCKDD KLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLS
Subjt:  NARKEAALFMKKVSSLVPALHLVDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLS

Query:  MEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQLLSQAVHNELKRSAVKDPLKRCIFTTKFNGIECKIGKKMYKICKIPDE
        MEII GGLMEIRK+IQVVNEVYKLHNLPEFYKEARPHISLAWALGD+S+LLSQ+VH+E+K+S VK+  KRCIFT KFNGIECKIGKKM+KICK PDE
Subjt:  MEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQLLSQAVHNELKRSAVKDPLKRCIFTTKFNGIECKIGKKMYKICKIPDE

SwissProt top hitse value%identityAlignment
Q5I0I5 U6 snRNA phosphodiesterase3.6e-1925.61Show/hide
Query:  YGGSSSDEEVDTVSPSSASTSASTSTPQFFDETVSFLPLP----PPPLSLLN-FPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVSIPTNARKEA
        Y  S S++E + V       +A  S P          PLP    P P S+LN FP++    +D       R+R+FPH +GN+A H+YIP       +   
Subjt:  YGGSSSDEEVDTVSPSSASTSASTSTPQFFDETVSFLPLP----PPPLSLLN-FPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVSIPTNARKEA

Query:  ALFMKKVSSLVPALHLVDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIITG
         + + +     P L  ++                     EFH+SLS++V +R H I   V +L+ ++ S +R++   ++ + + N + +RTF+ +E ++ 
Subjt:  ALFMKKVSSLVPALHLVDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIITG

Query:  GLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQLLSQAVHNELKRSAVKDPLKRCIFTTKFNGIECKIGKKMYKI
        G  +    +  V+ V K  +L  FY++   H+SLAW +GD    L      EL+    +      +       + CK G K + +
Subjt:  GLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQLLSQAVHNELKRSAVKDPLKRCIFTTKFNGIECKIGKKMYKI

Q6DEF6 U6 snRNA phosphodiesterase1.6e-1930.95Show/hide
Query:  SYGGSSSDEEV-DTVSPSSASTSASTSTPQFFD---------ETVSFLPLPPPPLSLLN-FPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVSIP
        +Y  SSS+EE   + SPS       T T +  D         ++    P  P P S+   F +S  +  D   +   R+RSF H +GN+A +V+ P   P
Subjt:  SYGGSSSDEEV-DTVSPSSASTSASTSTPQFFD---------ETVSFLPLPPPPLSLLN-FPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVSIP

Query:  TNARKEAALFMKKVSSLVPALHLVDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFL
          A      F++ ++ ++ A      DIPL V            + EFH+SLS+TV +R H I   V  +R  L   ++++    K + + N + +RTFL
Subjt:  TNARKEAALFMKKVSSLVPALHLVDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFL

Query:  SMEIITG--GLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQLLSQAVHNELKRSAVKDPLKRCIFTTKF--NGIECKIGKKMY
         ME+ TG   L+E+ K   +V+E  K  NL  FY++   HISLAW +GD ++ L +A   EL+   + D  +   F  +   N + CK G K++
Subjt:  SMEIITG--GLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQLLSQAVHNELKRSAVKDPLKRCIFTTKF--NGIECKIGKKMY

Q7ZYI9 U6 snRNA phosphodiesterase1.4e-1830.52Show/hide
Query:  PLPPPPLSLLNFPNSTCVLDDLPIDQAT----RVRSFPHVQGNYALHVYIPVSIPTNARKEAALFMKKVSSLVPALHLVDIDIPLDVLCKDDHKLEQALA
        PLPPP   L  F +   +  D  +D+ T    R+RSF H +GN+A +VYIP                      P    +D+   L  +  ++  L   ++
Subjt:  PLPPPPLSLLNFPNSTCVLDDLPIDQAT----RVRSFPHVQGNYALHVYIPVSIPTNARKEAALFMKKVSSLVPALHLVDIDIPLDVLCKDDHKLEQALA

Query:  REFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWAL
         EFHIS S+TV +R H I+  V  L+ KL    R+     + + + N + +RTFL +E ++ G+  + + +  V+   +  NL  FY+E   H+SLAW +
Subjt:  REFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWAL

Query:  GDVSQLLSQAVHNELKRSAVKDPLKRCIFTTKFNG--IECKIGKKMYKI
        GD  + L  +   EL++  V D  +     T+FN   I CK G K + I
Subjt:  GDVSQLLSQAVHNELKRSAVKDPLKRCIFTTKFNG--IECKIGKKMYKI

Q91W78 U6 snRNA phosphodiesterase6.6e-2126.07Show/hide
Query:  YGGSSSDEEVDTVSPSSASTSASTSTPQFFDETVSFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVSIPTNARKEAALFMK
        Y  S S++E + V  ++  +   T   +     V    LP P   L  FP++    +D       R+R+FPH +GN+A H+YIP     + R      + 
Subjt:  YGGSSSDEEVDTVSPSSASTSASTSTPQFFDETVSFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVSIPTNARKEAALFMK

Query:  KVSSLVPALHLVDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEI
        +    VP L L++                     EFH+SLS++V +R H I   V +L+ ++ S +R++   ++ + + N + +RTF+ +E ++ G  + 
Subjt:  KVSSLVPALHLVDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEI

Query:  RKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQLLSQAVHNELKRSAVKDPLKRCIFTTKFNGIECKIGKKMYKI
           +  V+   K  +L  FY++   HISLAW +GD S  L      EL+    +      +     N + CK G K + +
Subjt:  RKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQLLSQAVHNELKRSAVKDPLKRCIFTTKFNGIECKIGKKMYKI

Q9BQ65 U6 snRNA phosphodiesterase5.2e-1827.6Show/hide
Query:  PLP----PPPLSLLN-FPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVSIPTNARKEAALFMKKVSSLVPALHLVDIDIPLDVLCKDDHKLEQAL
        PLP    P P S+LN FP +    +D       RVR+FPH +GN+A HVY+P            + +    + VP L  + +                  
Subjt:  PLP----PPPLSLLN-FPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVSIPTNARKEAALFMKKVSSLVPALHLVDIDIPLDVLCKDDHKLEQAL

Query:  AREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWA
           FH+SLS++V +R H I   V  L+ ++ S  R++   ++ + + N + +RTF+ +E +T G  +    +  V+ V +  NL  FY++   H+SLAW 
Subjt:  AREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWA

Query:  LGDVSQLLSQAVHNELKRSAVKDPLK--RCIFTTKFNGIECKIGKKMYKI
        +GD    L      EL+  A+ D  +    +       + CK G K + +
Subjt:  LGDVSQLLSQAVHNELKRSAVKDPLK--RCIFTTKFNGIECKIGKKMYKI

Arabidopsis top hitse value%identityAlignment
AT5G51170.1 unknown protein2.1e-9460.07Show/hide
Query:  MDALRASYGGSSSDEEVDTVSPSSASTSASTSTPQFFDETVSFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVSIPTNARK
        M+ALRASYG SSSD + D +SP+S  T+ S             + LPPPPL+LL+   ST  LD    +   RVR+FPHV GNYALHVY+PV IP   +K
Subjt:  MDALRASYGGSSSDEEVDTVSPSSASTSASTSTPQFFDETVSFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVSIPTNARK

Query:  EAALFMKKVSSLVPALHLVDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEII
        E   F+KKV+S+VP LHLV+ D+PL +LCKDD K E+AL REFHISL R VP+RVHQI+S+++MLRQKLQ Q+RY IDF+KWE FVNDD +R+FLS+EI 
Subjt:  EAALFMKKVSSLVPALHLVDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEII

Query:  TGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQLLSQAVHNELKRSAVKDPLKRCIFTTKFNGIECKIGKKMYKICKIPDE
        T GL EI KQI  VNEVYKLHNLPEFYK+ RPHISL WALGD+   L  AV  EL++      ++  IFT+KF GIECKIG K +KICK+PDE
Subjt:  TGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQLLSQAVHNELKRSAVKDPLKRCIFTTKFNGIECKIGKKMYKICKIPDE

AT5G51170.2 unknown protein1.8e-6156.54Show/hide
Query:  MDALRASYGGSSSDEEVDTVSPSSASTSASTSTPQFFDETVSFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVSIPTNARK
        M+ALRASYG SSSD + D +SP+S  T+ S             + LPPPPL+LL+   ST  LD    +   RVR+FPHV GNYALHVY+PV IP   +K
Subjt:  MDALRASYGGSSSDEEVDTVSPSSASTSASTSTPQFFDETVSFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVSIPTNARK

Query:  EAALFMKKVSSLVPALHLVDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEII
        E   F+KKV+S+VP LHLV+ D+PL +LCKDD K E+AL REFHISL R VP+RVHQI+S+++MLRQKLQ Q+RY IDF+KWE FVNDD +R+FLS+EI 
Subjt:  EAALFMKKVSSLVPALHLVDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEII

Query:  TGGLMEIRKQIQVV
        T GL E+  ++ ++
Subjt:  TGGLMEIRKQIQVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCTCTGAGGGCTTCGTATGGAGGAAGCTCGTCAGATGAAGAAGTGGATACAGTGTCCCCTTCATCAGCATCGACATCAGCTTCAACATCAACACCACAATTCTT
CGATGAGACTGTGAGCTTTTTACCTCTGCCTCCACCGCCTCTCTCACTTCTCAATTTTCCAAATTCCACCTGTGTTTTGGATGATTTGCCAATCGATCAGGCGACTAGGG
TTCGAAGCTTTCCTCATGTTCAAGGAAACTATGCCCTACACGTCTATATCCCAGTGTCAATACCAACTAATGCAAGGAAGGAGGCGGCCTTGTTTATGAAGAAAGTTTCC
TCACTTGTGCCAGCTCTCCATCTGGTTGATATTGACATTCCATTGGACGTTTTATGTAAAGATGACCACAAACTTGAGCAAGCATTGGCTAGAGAATTTCACATAAGTTT
GTCAAGAACAGTGCCAATCCGAGTGCACCAGATTGACTCAATAGTGACAATGCTTCGCCAGAAGCTTCAGTCTCAAAGGCGTTATTGGATTGATTTTAGTAAGTGGGAAA
CTTTTGTTAACGATGATCTCTCTCGAACCTTTTTGTCAATGGAAATTATTACCGGAGGGCTAATGGAGATCAGAAAACAAATCCAAGTTGTTAATGAGGTTTATAAGCTC
CACAATCTTCCTGAATTTTACAAGGAAGCAAGACCACATATATCTCTTGCCTGGGCATTGGGTGACGTTAGTCAATTACTGAGTCAAGCAGTTCATAACGAATTAAAAAG
GTCCGCAGTTAAGGATCCATTGAAGAGATGTATTTTCACCACCAAATTCAATGGCATTGAATGTAAGATTGGTAAAAAAATGTATAAAATATGTAAAATTCCTGATGAAT
AA
mRNA sequenceShow/hide mRNA sequence
GGCTGATCTCCCACCGAAGTTCCCTATCAGCAAATATCTGTCGTTTGTCTTTGCCGGCGGCGGCGCAGCACCCATCCTCAATAGCGACCGGAGTTCAAGGCGTTTACAAC
GTTTTCCGGCGGTGCTCCCTCATCACACTTTTCAACAGGTACAACGACGTTCTGCTTCCTTTCGACAAGGTTTGGCACGTACCCACACGCAATTGGCCTTAGATTTGCGT
TACCAATTCTCAAATGAGTTCATATCTACAGGTTTAGGCTAATTCGAACACCAATCATCAAGCGTTTAACTACTGTTAGGCGACGTCTGAGAATGGATGCTCTGAGGGCT
TCGTATGGAGGAAGCTCGTCAGATGAAGAAGTGGATACAGTGTCCCCTTCATCAGCATCGACATCAGCTTCAACATCAACACCACAATTCTTCGATGAGACTGTGAGCTT
TTTACCTCTGCCTCCACCGCCTCTCTCACTTCTCAATTTTCCAAATTCCACCTGTGTTTTGGATGATTTGCCAATCGATCAGGCGACTAGGGTTCGAAGCTTTCCTCATG
TTCAAGGAAACTATGCCCTACACGTCTATATCCCAGTGTCAATACCAACTAATGCAAGGAAGGAGGCGGCCTTGTTTATGAAGAAAGTTTCCTCACTTGTGCCAGCTCTC
CATCTGGTTGATATTGACATTCCATTGGACGTTTTATGTAAAGATGACCACAAACTTGAGCAAGCATTGGCTAGAGAATTTCACATAAGTTTGTCAAGAACAGTGCCAAT
CCGAGTGCACCAGATTGACTCAATAGTGACAATGCTTCGCCAGAAGCTTCAGTCTCAAAGGCGTTATTGGATTGATTTTAGTAAGTGGGAAACTTTTGTTAACGATGATC
TCTCTCGAACCTTTTTGTCAATGGAAATTATTACCGGAGGGCTAATGGAGATCAGAAAACAAATCCAAGTTGTTAATGAGGTTTATAAGCTCCACAATCTTCCTGAATTT
TACAAGGAAGCAAGACCACATATATCTCTTGCCTGGGCATTGGGTGACGTTAGTCAATTACTGAGTCAAGCAGTTCATAACGAATTAAAAAGGTCCGCAGTTAAGGATCC
ATTGAAGAGATGTATTTTCACCACCAAATTCAATGGCATTGAATGTAAGATTGGTAAAAAAATGTATAAAATATGTAAAATTCCTGATGAATAAAAAGATCATTGTGTGA
GACATGTTCTACAGTTTATGCCCATGAAATTTTTTTTATGTATTTCAACTTTAGTAACAAAATATCTTCCTATAGATATTGCACTTTTTATTATCTTTAATT
Protein sequenceShow/hide protein sequence
MDALRASYGGSSSDEEVDTVSPSSASTSASTSTPQFFDETVSFLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVSIPTNARKEAALFMKKVS
SLVPALHLVDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKL
HNLPEFYKEARPHISLAWALGDVSQLLSQAVHNELKRSAVKDPLKRCIFTTKFNGIECKIGKKMYKICKIPDE