; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0027915 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027915
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionNuclear transcription factor Y subunit
Genome locationchr02:4526890..4531967
RNA-Seq ExpressionPI0027915
SyntenyPI0027915
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A
IPR018362 - CCAAT-binding factor, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139033.1 nuclear transcription factor Y subunit A-1 [Cucumis sativus]5.6e-14197.4Show/hide
Query:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTLPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM
        MQSKSETNNQLD NGAPSTSIYYEPWWRGMGYNT PLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD QKM
Subjt:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTLPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM

Query:  QYVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
        Q+VSSTLPAMHGECL QSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
Subjt:  QYVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK

Query:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE
        SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEA+GKEKHSDKVNES YRLNDGSEQQNGSSLTNKASE
Subjt:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE

XP_008450422.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Cucumis melo]1.9e-14197.4Show/hide
Query:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTLPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM
        MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNT PLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +KM
Subjt:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTLPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM

Query:  QYVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
        Q+VSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
Subjt:  QYVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK

Query:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE
        SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKV+ESGYRLNDGSEQQ GSSL NKASE
Subjt:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE

XP_008450423.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis melo]1.9e-14197.4Show/hide
Query:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTLPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM
        MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNT PLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +KM
Subjt:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTLPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM

Query:  QYVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
        Q+VSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
Subjt:  QYVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK

Query:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE
        SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKV+ESGYRLNDGSEQQ GSSL NKASE
Subjt:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE

XP_022154358.1 nuclear transcription factor Y subunit A-1-like [Momordica charantia]7.6e-13090.04Show/hide
Query:  MQSKSETNNQL--DPNGAPSTSIYYEPWWRGMGYNTLPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ
        MQSKSETNNQL  DPNGAPSTS+YYEPWWRG+GYN +PLPVVGGN SSSTSLEFPNGGSESNDGQSVSNND+NDEEDDV+KEVQATGSPHSAGSYR DAQ
Subjt:  MQSKSETNNQL--DPNGAPSTSIYYEPWWRGMGYNTLPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ

Query:  KMQYVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQ+VSSTLPAMHGEC TQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQYVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE
        KK IKARKPYLHESRHQHAIRR+R SGGRFAKK EA+  E HSDK NESGY LNDGSEQ+NGSS  NKAS+
Subjt:  KKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE

XP_038879324.1 nuclear transcription factor Y subunit A-1-like [Benincasa hispida]9.0e-13996.28Show/hide
Query:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTLPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM
        MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNT PLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM
Subjt:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTLPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM

Query:  QYVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
        Q+VSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
Subjt:  QYVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK

Query:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE
        SIKARKPYLHESRHQHAIRRSRSSGGRFAKK+E DGK    DKVNESGYRLN+GSEQQNGSSLTN+ASE
Subjt:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE

TrEMBL top hitse value%identityAlignment
A0A0A0M2S3 Nuclear transcription factor Y subunit2.7e-14197.4Show/hide
Query:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTLPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM
        MQSKSETNNQLD NGAPSTSIYYEPWWRGMGYNT PLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD QKM
Subjt:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTLPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM

Query:  QYVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
        Q+VSSTLPAMHGECL QSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
Subjt:  QYVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK

Query:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE
        SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEA+GKEKHSDKVNES YRLNDGSEQQNGSSLTNKASE
Subjt:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE

A0A1S3BP85 Nuclear transcription factor Y subunit9.4e-14297.4Show/hide
Query:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTLPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM
        MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNT PLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +KM
Subjt:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTLPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM

Query:  QYVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
        Q+VSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
Subjt:  QYVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK

Query:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE
        SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKV+ESGYRLNDGSEQQ GSSL NKASE
Subjt:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE

A0A1S3BPV3 Nuclear transcription factor Y subunit9.4e-14297.4Show/hide
Query:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTLPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM
        MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNT PLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +KM
Subjt:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTLPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM

Query:  QYVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
        Q+VSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
Subjt:  QYVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK

Query:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE
        SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKV+ESGYRLNDGSEQQ GSSL NKASE
Subjt:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE

A0A5D3D5Q2 Nuclear transcription factor Y subunit9.4e-14297.4Show/hide
Query:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTLPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM
        MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNT PLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +KM
Subjt:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTLPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM

Query:  QYVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
        Q+VSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
Subjt:  QYVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK

Query:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE
        SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKV+ESGYRLNDGSEQQ GSSL NKASE
Subjt:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE

A0A6J1DK42 Nuclear transcription factor Y subunit3.7e-13090.04Show/hide
Query:  MQSKSETNNQL--DPNGAPSTSIYYEPWWRGMGYNTLPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ
        MQSKSETNNQL  DPNGAPSTS+YYEPWWRG+GYN +PLPVVGGN SSSTSLEFPNGGSESNDGQSVSNND+NDEEDDV+KEVQATGSPHSAGSYR DAQ
Subjt:  MQSKSETNNQL--DPNGAPSTSIYYEPWWRGMGYNTLPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ

Query:  KMQYVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQ+VSSTLPAMHGEC TQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQYVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE
        KK IKARKPYLHESRHQHAIRR+R SGGRFAKK EA+  E HSDK NESGY LNDGSEQ+NGSS  NKAS+
Subjt:  KKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE

SwissProt top hitse value%identityAlignment
Q84JP1 Nuclear transcription factor Y subunit A-71.6e-2141.11Show/hide
Query:  GSYRQDAQKMQYVSSTLP-AMHGECLTQSTQLELVG--HSIACASNPYQDPYYGGMMAFYGHQPLG--YPMVGGPHARMPLPIEIAQDPVFVNAKQYQGI
        GS+ +  Q+  +    +P A + E +  S      G  +S+A    PY DPYY  + A       G    ++G     +PLP +  ++PVFVNAKQY GI
Subjt:  GSYRQDAQKMQYVSSTLP-AMHGECLTQSTQLELVG--HSIACASNPYQDPYYGGMMAFYGHQPLG--YPMVGGPHARMPLPIEIAQDPVFVNAKQYQGI

Query:  LRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVNESGYRLNDGSEQQNGSSLTN
        LRRRQ+RA+ E++ K IK+RKPYLHESRH HAIRR R  GGRF    + D  E H D  +E    L+ G      SS T+
Subjt:  LRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVNESGYRLNDGSEQQNGSSLTN

Q8VY64 Nuclear transcription factor Y subunit A-44.2e-2242.2Show/hide
Query:  TGSPHSAGSYRQD-AQKMQYVSSTLPAMHGECLTQSTQLELV-GHSIACASNPYQDPYYGGMMAFYGHQPLGYP-----MVGGPHARMPLPIEIAQDPVF
        T S H      +  A+K +  S T P +     ++S     V    +A    PY DPYY  + A   + P  YP     ++G     +PL  +  ++PVF
Subjt:  TGSPHSAGSYRQD-AQKMQYVSSTLPAMHGECLTQSTQLELV-GHSIACASNPYQDPYYGGMMAFYGHQPLGYP-----MVGGPHARMPLPIEIAQDPVF

Query:  VNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRF--AKKSEADGKEKHSDKVNES
        VNAKQY GILRRRQ+RAK EA  ++IKA+KPY+HESRH HAIRR R  GGRF  AKK   D KE+     +E+
Subjt:  VNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRF--AKKSEADGKEKHSDKVNES

Q93ZH2 Nuclear transcription factor Y subunit A-31.4e-1733.59Show/hide
Query:  MGYNTLPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQYVSSTLPAMHGECLTQ-------STQLE
        + +  +P   V     S+ SL       +S  G   +   ++ ++ D S   Q+TG  ++  +   D    + +S    A  G  +TQ         Q  
Subjt:  MGYNTLPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQYVSSTLPAMHGECLTQ-------STQLE

Query:  LVG----HSIACASN---PYQDPYYGGMMA--FYGHQPLGYP-MVGGPHARMPLPIEIAQ-DPVFVNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHE
        + G    H     +N    Y DP+YGG++A  +    P   P MV     R+PLP E+ + DPVFVNAKQY  I+RRRQ RAK EA+ K I+ARKPYLHE
Subjt:  LVG----HSIACASN---PYQDPYYGGMMA--FYGHQPLGYP-MVGGPHARMPLPIEIAQ-DPVFVNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHE

Query:  SRHQHAIRRSRSSGGRF-------AKKSEADGKEKHSDKVNESGYRLNDGSEQQNGSSLTNK
        SRH HA++R R SGGRF        +  +A  +E+  DK+ +   R  + S  +      NK
Subjt:  SRHQHAIRRSRSSGGRF-------AKKSEADGKEKHSDKVNESGYRLNDGSEQQNGSSLTNK

Q945M9 Nuclear transcription factor Y subunit A-92.1e-4548.58Show/hide
Query:  MQSKSET-NNQLDP--NGAPSTSI-YYEPWWRGMGYNTLPLPVVGGNASS-STSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQ
        M SKS++  N++D   +G  S+SI    PW R          V  G+ SS S +L       ESN  +S SN D     + V+KE Q T SP SAG Y  
Subjt:  MQSKSET-NNQLDP--NGAPSTSI-YYEPWWRGMGYNTLPLPVVGGNASS-STSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQ

Query:  DAQKMQYVSSTLPAMHGECLTQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGYPMVGG-PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA
          Q+  +   T P  H          +LVGH++  A SNPYQDPYY G+M  YGH PLG+   GG PH+RMPLP E+AQ+PVFVNAKQYQ ILRRRQARA
Subjt:  DAQKMQYVSSTLPAMHGECLTQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGYPMVGG-PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA

Query:  KAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKK-----SEADGKEKHSDKVNESGYRLN-DGSEQQNGSSLTNKASE
        KAE EKK IK+RKPYLHESRHQHA+RR R +GGRFAKK     S+   +EK +  V +S    N D  E  NG   T +  E
Subjt:  KAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKK-----SEADGKEKHSDKVNESGYRLN-DGSEQQNGSSLTNKASE

Q9LXV5 Nuclear transcription factor Y subunit A-17.3e-5148.67Show/hide
Query:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTLPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD
        MQSK    N+ + N         +Y EPWW+   +  +P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA  S  S  ++  +
Subjt:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTLPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD

Query:  AQKMQYVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA
               + ++  MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+ARAKA
Subjt:  AQKMQYVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA

Query:  EAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVNESGYRLN-DGSEQ
        E E+K I+ RKPYLHESRH+HA+RR+R+SGGRFAKKSE +  E    +  E G   N  GSEQ
Subjt:  EAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVNESGYRLN-DGSEQ

Arabidopsis top hitse value%identityAlignment
AT3G20910.1 nuclear factor Y, subunit A91.5e-4648.58Show/hide
Query:  MQSKSET-NNQLDP--NGAPSTSI-YYEPWWRGMGYNTLPLPVVGGNASS-STSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQ
        M SKS++  N++D   +G  S+SI    PW R          V  G+ SS S +L       ESN  +S SN D     + V+KE Q T SP SAG Y  
Subjt:  MQSKSET-NNQLDP--NGAPSTSI-YYEPWWRGMGYNTLPLPVVGGNASS-STSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQ

Query:  DAQKMQYVSSTLPAMHGECLTQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGYPMVGG-PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA
          Q+  +   T P  H          +LVGH++  A SNPYQDPYY G+M  YGH PLG+   GG PH+RMPLP E+AQ+PVFVNAKQYQ ILRRRQARA
Subjt:  DAQKMQYVSSTLPAMHGECLTQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGYPMVGG-PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA

Query:  KAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKK-----SEADGKEKHSDKVNESGYRLN-DGSEQQNGSSLTNKASE
        KAE EKK IK+RKPYLHESRHQHA+RR R +GGRFAKK     S+   +EK +  V +S    N D  E  NG   T +  E
Subjt:  KAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKK-----SEADGKEKHSDKVNESGYRLN-DGSEQQNGSSLTNKASE

AT5G12840.1 nuclear factor Y, subunit A15.2e-5248.67Show/hide
Query:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTLPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD
        MQSK    N+ + N         +Y EPWW+   +  +P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA  S  S  ++  +
Subjt:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTLPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD

Query:  AQKMQYVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA
               + ++  MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+ARAKA
Subjt:  AQKMQYVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA

Query:  EAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVNESGYRLN-DGSEQ
        E E+K I+ RKPYLHESRH+HA+RR+R+SGGRFAKKSE +  E    +  E G   N  GSEQ
Subjt:  EAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVNESGYRLN-DGSEQ

AT5G12840.2 nuclear factor Y, subunit A11.5e-5149.81Show/hide
Query:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTLPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD
        MQSK    N+ + N         +Y EPWW+   +  +P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA      A S R D
Subjt:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTLPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD

Query:  AQKMQYVSSTLPA--MHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA
           M+     L    MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+ARA
Subjt:  AQKMQYVSSTLPA--MHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA

Query:  KAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVNESGYRLN-DGSEQ
        KAE E+K I+ RKPYLHESRH+HA+RR+R+SGGRFAKKSE +  E    +  E G   N  GSEQ
Subjt:  KAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVNESGYRLN-DGSEQ

AT5G12840.3 nuclear factor Y, subunit A15.2e-5248.67Show/hide
Query:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTLPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD
        MQSK    N+ + N         +Y EPWW+   +  +P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA  S  S  ++  +
Subjt:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTLPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD

Query:  AQKMQYVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA
               + ++  MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+ARAKA
Subjt:  AQKMQYVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA

Query:  EAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVNESGYRLN-DGSEQ
        E E+K I+ RKPYLHESRH+HA+RR+R+SGGRFAKKSE +  E    +  E G   N  GSEQ
Subjt:  EAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVNESGYRLN-DGSEQ

AT5G12840.4 nuclear factor Y, subunit A11.5e-5149.81Show/hide
Query:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTLPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD
        MQSK    N+ + N         +Y EPWW+   +  +P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA      A S R D
Subjt:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTLPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD

Query:  AQKMQYVSSTLPA--MHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA
           M+     L    MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+ARA
Subjt:  AQKMQYVSSTLPA--MHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA

Query:  KAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVNESGYRLN-DGSEQ
        KAE E+K I+ RKPYLHESRH+HA+RR+R+SGGRFAKKSE +  E    +  E G   N  GSEQ
Subjt:  KAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKHSDKVNESGYRLN-DGSEQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCAAAATCTGAAACCAATAATCAGCTCGATCCAAATGGTGCACCATCGACGAGTATCTATTATGAACCCTGGTGGCGTGGCATGGGGTACAATACTTTGCCATT
ACCTGTGGTTGGGGGAAATGCTTCCAGTTCAACTTCTCTTGAATTCCCTAATGGTGGTTCAGAGTCAAATGATGGCCAATCTGTGTCTAATAATGATGTAAATGATGAAG
AAGATGATGTTTCTAAAGAAGTGCAAGCTACTGGATCTCCACATTCTGCGGGAAGCTACAGACAGGATGCTCAGAAGATGCAGTATGTTTCGTCCACTTTGCCAGCAATG
CACGGTGAATGTCTGACACAGTCTACACAACTTGAACTTGTTGGTCACTCTATTGCTTGTGCATCAAATCCCTATCAGGATCCATATTATGGAGGAATGATGGCCTTCTA
TGGTCATCAGCCCTTGGGCTATCCCATGGTTGGAGGACCACATGCTAGAATGCCATTGCCCATTGAGATAGCACAAGACCCCGTTTTCGTGAATGCAAAGCAATACCAGG
GAATTTTGAGGCGAAGGCAAGCACGTGCAAAAGCTGAGGCTGAGAAGAAGTCGATAAAAGCCAGAAAGCCATACCTTCATGAGTCTAGACACCAGCATGCCATAAGAAGG
TCGAGAAGTAGTGGAGGCCGTTTTGCAAAGAAAAGCGAAGCTGATGGAAAGGAAAAGCATTCTGATAAAGTAAACGAGAGTGGTTACCGCCTAAATGACGGTTCTGAACA
GCAGAACGGAAGCTCCTTGACGAACAAGGCCTCCGAGTAG
mRNA sequenceShow/hide mRNA sequence
CCCCTTTAATTATTATTATTATTATTATTATTTTTGAATTCTCTCCGATTTCTCTTCTCCCCCATCAGATTTTTCCTTTTTCTCCATTTGGACGTTGCTCCAATTCCTTC
CGGGTCTGAAGGTATGCAGTCAAAATCTGAAACCAATAATCAGCTCGATCCAAATGGTGCACCATCGACGAGTATCTATTATGAACCCTGGTGGCGTGGCATGGGGTACA
ATACTTTGCCATTACCTGTGGTTGGGGGAAATGCTTCCAGTTCAACTTCTCTTGAATTCCCTAATGGTGGTTCAGAGTCAAATGATGGCCAATCTGTGTCTAATAATGAT
GTAAATGATGAAGAAGATGATGTTTCTAAAGAAGTGCAAGCTACTGGATCTCCACATTCTGCGGGAAGCTACAGACAGGATGCTCAGAAGATGCAGTATGTTTCGTCCAC
TTTGCCAGCAATGCACGGTGAATGTCTGACACAGTCTACACAACTTGAACTTGTTGGTCACTCTATTGCTTGTGCATCAAATCCCTATCAGGATCCATATTATGGAGGAA
TGATGGCCTTCTATGGTCATCAGCCCTTGGGCTATCCCATGGTTGGAGGACCACATGCTAGAATGCCATTGCCCATTGAGATAGCACAAGACCCCGTTTTCGTGAATGCA
AAGCAATACCAGGGAATTTTGAGGCGAAGGCAAGCACGTGCAAAAGCTGAGGCTGAGAAGAAGTCGATAAAAGCCAGAAAGCCATACCTTCATGAGTCTAGACACCAGCA
TGCCATAAGAAGGTCGAGAAGTAGTGGAGGCCGTTTTGCAAAGAAAAGCGAAGCTGATGGAAAGGAAAAGCATTCTGATAAAGTAAACGAGAGTGGTTACCGCCTAAATG
ACGGTTCTGAACAGCAGAACGGAAGCTCCTTGACGAACAAGGCCTCCGAGTAGCAAAGCAACCTGCACTGAATGCCAAGACAATGGCCAGAATTGTTCAGTGGGGAGTGA
GGGATCGATTGCTTGTTTGTTAAAAGTACTGAGTTCCTAGCAAAAGCATGCTAGGCGGCAAATCATTCTTGGCTTTGTTGTTCTGTTGCTTTGTAGAAAAAGAAAAAGGA
ATGGTGAATGATATGTGACTTATAGGATCTCATGGCTTCTTCAAAGGATTCCTCAAAAGTCTAAGAGATTTCTTCATTCCATTTTCTTTTTTTGCCTTTTTTTTTTGTAC
AGAGTTTATGGTGACGTAAGGGAGTGGGAACTTTGATCTCTTGTATTATATTAGCAGAGCGTGAAACTAAATGAATCATAAGGCTTAGGATAGATATAGTGATTGTGATT
CACAAAGCTTAGACTTGAAAGATTTTAGATTTGAGTATCTAAGGTTTGACAGATTATTGATGCAAATTATAATTTTCAGGTACAGAAATGAATAGAGTTTAAATGGCTTT
CTTCA
Protein sequenceShow/hide protein sequence
MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTLPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQYVSSTLPAM
HGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRR
SRSSGGRFAKKSEADGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE