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PI0027945 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027945
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionType 1 metallothionein
Genome locationchr08:16064925..16066175
RNA-Seq ExpressionPI0027945
SyntenyPI0027945
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAD18374.1 type 1 metallothionein [Vigna radiata var. radiata]3.6e-0443.84Show/hide
Query:  MANCGCGSACNCSPNNCSCNH----------------NVAPMKENFEG-----GCGCNKCSCGDNCKCDPCNC
        M++CGCGS+CNC  +NCSCN                  V P+K  FEG         N C CG NC CDPCNC
Subjt:  MANCGCGSACNCSPNNCSCNH----------------NVAPMKENFEG-----GCGCNKCSCGDNCKCDPCNC

KAE8649531.1 hypothetical protein Csa_017930, partial [Cucumis sativus]1.1e-1986.54Show/hide
Query:  MANCGCGSACNCSPNNCSCNHNVAPMKENFEGGCGCNKCSCGDNCKCDPCNC
        MANC CGSACNCSPNNC+CNHNVA MKEN EG CGCNKCSCGDNC C+PCNC
Subjt:  MANCGCGSACNCSPNNCSCNHNVAPMKENFEGGCGCNKCSCGDNCKCDPCNC

QCE04317.1 Metallothionein [Vigna unguiculata]3.6e-0443.84Show/hide
Query:  MANCGCGSACNCSPNNCSCNH----------------NVAPMKENFEGG-----CGCNKCSCGDNCKCDPCNC
        M+ CGCGS+CNC  +NCSCN                  V P+K  FEGG        + C CG NC CDPCNC
Subjt:  MANCGCGSACNCSPNNCSCNH----------------NVAPMKENFEGG-----CGCNKCSCGDNCKCDPCNC

XP_022966635.1 uncharacterized protein LOC111466261 isoform X1 [Cucurbita maxima]4.2e-0859.26Show/hide
Query:  MANCGCGSACNCSPNNCSCNHNVAPMKE--NFEGGCGCNKCSCGDNCKCDPCNC
        M  CGCGSACNC  NNCSC H+ AP+ +  N  GG     C CG NC CDPCNC
Subjt:  MANCGCGSACNCSPNNCSCNHNVAPMKE--NFEGGCGCNKCSCGDNCKCDPCNC

XP_022966636.1 uncharacterized protein LOC111466261 isoform X2 [Cucurbita maxima]1.7e-0964.15Show/hide
Query:  MANCGCGSACNCSPNNCSCNHNVAP-MKENFEGGCGCNKCSCGDNCKCDPCNC
        M  CGCGSACNC  NNCSC H+ AP MK+N  GG     C CG NC CDPCNC
Subjt:  MANCGCGSACNCSPNNCSCNHNVAP-MKENFEGGCGCNKCSCGDNCKCDPCNC

TrEMBL top hitse value%identityAlignment
A0A4D6MWR2 Metallothionein1.8e-0443.84Show/hide
Query:  MANCGCGSACNCSPNNCSCNH----------------NVAPMKENFEGG-----CGCNKCSCGDNCKCDPCNC
        M+ CGCGS+CNC  +NCSCN                  V P+K  FEGG        + C CG NC CDPCNC
Subjt:  MANCGCGSACNCSPNNCSCNH----------------NVAPMKENFEGG-----CGCNKCSCGDNCKCDPCNC

A0A6J1HPV6 uncharacterized protein LOC111466261 isoform X28.2e-1064.15Show/hide
Query:  MANCGCGSACNCSPNNCSCNHNVAP-MKENFEGGCGCNKCSCGDNCKCDPCNC
        M  CGCGSACNC  NNCSC H+ AP MK+N  GG     C CG NC CDPCNC
Subjt:  MANCGCGSACNCSPNNCSCNHNVAP-MKENFEGGCGCNKCSCGDNCKCDPCNC

A0A6J1HS62 uncharacterized protein LOC111466261 isoform X12.0e-0859.26Show/hide
Query:  MANCGCGSACNCSPNNCSCNHNVAPMKE--NFEGGCGCNKCSCGDNCKCDPCNC
        M  CGCGSACNC  NNCSC H+ AP+ +  N  GG     C CG NC CDPCNC
Subjt:  MANCGCGSACNCSPNNCSCNHNVAPMKE--NFEGGCGCNKCSCGDNCKCDPCNC

Q75NH5 Type 1 metallothionein1.8e-0443.84Show/hide
Query:  MANCGCGSACNCSPNNCSCNH----------------NVAPMKENFEGG-----CGCNKCSCGDNCKCDPCNC
        M+ CGCGS+CNC  +NCSCN                  V P+K  FEGG        + C CG NC CDPCNC
Subjt:  MANCGCGSACNCSPNNCSCNH----------------NVAPMKENFEGG-----CGCNKCSCGDNCKCDPCNC

Q75NI4 Type 1 metallothionein1.8e-0443.84Show/hide
Query:  MANCGCGSACNCSPNNCSCNH----------------NVAPMKENFEG-----GCGCNKCSCGDNCKCDPCNC
        M++CGCGS+CNC  +NCSCN                  V P+K  FEG         N C CG NC CDPCNC
Subjt:  MANCGCGSACNCSPNNCSCNH----------------NVAPMKENFEG-----GCGCNKCSCGDNCKCDPCNC

SwissProt top hitse value%identityAlignment
P20238 Metallothionein-like protein 15.8e-0542.25Show/hide
Query:  ANCGCGSACNCSPNNCSCN--------------HNVAPMK------ENFEGGCGCNKCSCGDNCKCDPCNC
        + C CGS C C  +NCSC+                VAP+K      E   G  G N C CG NCKCDPCNC
Subjt:  ANCGCGSACNCSPNNCSCN--------------HNVAPMK------ENFEGGCGCNKCSCGDNCKCDPCNC

P20830 Metallothionein-like protein 14.5e-0540Show/hide
Query:  MANCGCGSACNCSPNNCSCNH------------------NVAPMKENFEG-----GCGCNKCSCGDNCKCDPCNC
        M+ CGCGS+CNC  ++C CN                    V P K  FEG           C CGDNC CDPCNC
Subjt:  MANCGCGSACNCSPNNCSCNH------------------NVAPMKENFEG-----GCGCNKCSCGDNCKCDPCNC

Q39511 Metallothionein-like protein 14.9e-0437.5Show/hide
Query:  MANCGCGSACNCSPNNCSCNH----------------NVAPMKENFEGG----CGCNKCSCGDNCKCDPCNC
        M++CGCGS C+C  + C+C +                +VAP+K + EG      G + C CG +C CDPCNC
Subjt:  MANCGCGSACNCSPNNCSCNH----------------NVAPMKENFEGG----CGCNKCSCGDNCKCDPCNC

Q41670 Metallothionein-like protein 1B2.9e-0438.67Show/hide
Query:  MANCGCGSACNCSPNNCSCNH------------------NVAPMKENFEG-----GCGCNKCSCGDNCKCDPCNC
        M+ C CGS+CNC  ++C CN                    V P K  FEG           C CGDNC CDPCNC
Subjt:  MANCGCGSACNCSPNNCSCNH------------------NVAPMKENFEG-----GCGCNKCSCGDNCKCDPCNC

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAACTGTGGCTGTGGCTCTGCCTGCAATTGCAGTCCCAACAACTGCTCGTGCAATCATAATGTTGCTCCCATGAAAGAAAACTTCGAAGGTGGTTGTGGCTGCAA
CAAATGCTCATGCGGAGACAATTGCAAGTGCGATCCATGCAACTGCTAA
mRNA sequenceShow/hide mRNA sequence
AGTAAGCTTTGAGTTTTCGACTAGAAATTCAAAGAAAATTTAAAGTTTTAAATTTTAATTCACTTTAAAAGAAAATGGCAAACTGTGGCTGTGGCTCTGCCTGCAATTGC
AGTCCCAACAACTGCTCGTGCAATCATAATGTTGCTCCCATGAAAGAAAACTTCGAAGGTGGTTGTGGCTGCAACAAATGCTCATGCGGAGACAATTGCAAGTGCGATCC
ATGCAACTGCTAAATCTCAAAGCTGATTTCGATATGAAAAGCATACTAATTTACATATTAATGTGCTTATAATGATTTGAATTATGTATCAATGGTTGTGTGTGTGTGTA
TGTTGTTTGTCTGTAAGGTGTTTGACAAAATGCCGCTTACAAATACTTGAGAAATAAAATACCACACAGCAACCTATTATTATATATTTGTATCTTGTTTTTCCCTTCCA
ATGTCATTTCAAATAGGCCAGTTATGACTGGTTGATTTCTATT
Protein sequenceShow/hide protein sequence
MANCGCGSACNCSPNNCSCNHNVAPMKENFEGGCGCNKCSCGDNCKCDPCNC