; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0027976 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027976
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationchr03:14292460..14292750
RNA-Seq ExpressionPI0027976
SyntenyPI0027976
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0098869 - cellular oxidant detoxification (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004601 - peroxidase activity (molecular function)
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036997.1 gypsy/ty3 element polyprotein [Cucumis melo var. makuwa]6.0e-3776.04Show/hide
Query:  MGSGKTVQGRGMCKGVTVGLPVMTIVDDFLPLELGNLDMVLGMQWLRKQGVMAVDWRELIMTFSVGETRVVLKGDPSLSRMEVSFKMLTKTWQPED
        MGSGK VQGRG+CKG+TVGLPV++IV+DFLPLELGN+DMVLGMQWL+KQG M VDW+ L MTF VG+T+V+LKGDPSL+RME+S K+L KTWQP+D
Subjt:  MGSGKTVQGRGMCKGVTVGLPVMTIVDDFLPLELGNLDMVLGMQWLRKQGVMAVDWRELIMTFSVGETRVVLKGDPSLSRMEVSFKMLTKTWQPED
KAA0056980.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]2.1e-3777.08Show/hide
Query:  MGSGKTVQGRGMCKGVTVGLPVMTIVDDFLPLELGNLDMVLGMQWLRKQGVMAVDWRELIMTFSVGETRVVLKGDPSLSRMEVSFKMLTKTWQPED
        MGSGK VQGRGMCKG+TVGLPV++IV+DFLPLELGN+DMVLGMQWL+KQG M VDW+ L MTF VG+T+V+LKGDPSL+RME+S K+L KTWQP+D
Subjt:  MGSGKTVQGRGMCKGVTVGLPVMTIVDDFLPLELGNLDMVLGMQWLRKQGVMAVDWRELIMTFSVGETRVVLKGDPSLSRMEVSFKMLTKTWQPED
TYJ98541.1 pleiotropic drug resistance protein 1-like [Cucumis melo var. makuwa]3.5e-3776.04Show/hide
Query:  MGSGKTVQGRGMCKGVTVGLPVMTIVDDFLPLELGNLDMVLGMQWLRKQGVMAVDWRELIMTFSVGETRVVLKGDPSLSRMEVSFKMLTKTWQPED
        MGSGK VQGRGMCKG+TVGLPV+T+V+DFLPL+LGN+DMVLGMQWL+KQG M VDW+ L MTF VG+T+V+LKGDPSL+RME+S K+L KTWQP+D
Subjt:  MGSGKTVQGRGMCKGVTVGLPVMTIVDDFLPLELGNLDMVLGMQWLRKQGVMAVDWRELIMTFSVGETRVVLKGDPSLSRMEVSFKMLTKTWQPED
TYK17386.1 gypsy/ty3 element polyprotein [Cucumis melo var. makuwa]6.0e-3776.04Show/hide
Query:  MGSGKTVQGRGMCKGVTVGLPVMTIVDDFLPLELGNLDMVLGMQWLRKQGVMAVDWRELIMTFSVGETRVVLKGDPSLSRMEVSFKMLTKTWQPED
        MGSGK VQGRG+CKG+TVGLPV++IV+DFLPLELGN+DMVLGMQWL+KQG M VDW+ L MTF VG+T+V+LKGDPSL+RME+S K+L KTWQP+D
Subjt:  MGSGKTVQGRGMCKGVTVGLPVMTIVDDFLPLELGNLDMVLGMQWLRKQGVMAVDWRELIMTFSVGETRVVLKGDPSLSRMEVSFKMLTKTWQPED
TYK21209.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]6.0e-3776.04Show/hide
Query:  MGSGKTVQGRGMCKGVTVGLPVMTIVDDFLPLELGNLDMVLGMQWLRKQGVMAVDWRELIMTFSVGETRVVLKGDPSLSRMEVSFKMLTKTWQPED
        MGSGK VQGRG+CKG+TVGLPV++IV+DFLPLELGN+DMVLGMQWL+KQG M VDW+ L MTF VG+T+V+LKGDPSL+RME+S K+L KTWQP+D
Subjt:  MGSGKTVQGRGMCKGVTVGLPVMTIVDDFLPLELGNLDMVLGMQWLRKQGVMAVDWRELIMTFSVGETRVVLKGDPSLSRMEVSFKMLTKTWQPED
TrEMBL top hitse value%identityAlignment
A0A5A7T606 Gypsy/ty3 element polyprotein2.9e-3776.04Show/hide
Query:  MGSGKTVQGRGMCKGVTVGLPVMTIVDDFLPLELGNLDMVLGMQWLRKQGVMAVDWRELIMTFSVGETRVVLKGDPSLSRMEVSFKMLTKTWQPED
        MGSGK VQGRG+CKG+TVGLPV++IV+DFLPLELGN+DMVLGMQWL+KQG M VDW+ L MTF VG+T+V+LKGDPSL+RME+S K+L KTWQP+D
Subjt:  MGSGKTVQGRGMCKGVTVGLPVMTIVDDFLPLELGNLDMVLGMQWLRKQGVMAVDWRELIMTFSVGETRVVLKGDPSLSRMEVSFKMLTKTWQPED
A0A5A7UPE1 Ty3/gypsy retrotransposon protein1.0e-3777.08Show/hide
Query:  MGSGKTVQGRGMCKGVTVGLPVMTIVDDFLPLELGNLDMVLGMQWLRKQGVMAVDWRELIMTFSVGETRVVLKGDPSLSRMEVSFKMLTKTWQPED
        MGSGK VQGRGMCKG+TVGLPV++IV+DFLPLELGN+DMVLGMQWL+KQG M VDW+ L MTF VG+T+V+LKGDPSL+RME+S K+L KTWQP+D
Subjt:  MGSGKTVQGRGMCKGVTVGLPVMTIVDDFLPLELGNLDMVLGMQWLRKQGVMAVDWRELIMTFSVGETRVVLKGDPSLSRMEVSFKMLTKTWQPED
A0A5D3BD16 Ty3/gypsy retrotransposon protein2.9e-3776.04Show/hide
Query:  MGSGKTVQGRGMCKGVTVGLPVMTIVDDFLPLELGNLDMVLGMQWLRKQGVMAVDWRELIMTFSVGETRVVLKGDPSLSRMEVSFKMLTKTWQPED
        MGSGK VQGRG+CKG+TVGLPV++IV+DFLPLELGN+DMVLGMQWL+KQG M VDW+ L MTF VG+T+V+LKGDPSL+RME+S K+L KTWQP+D
Subjt:  MGSGKTVQGRGMCKGVTVGLPVMTIVDDFLPLELGNLDMVLGMQWLRKQGVMAVDWRELIMTFSVGETRVVLKGDPSLSRMEVSFKMLTKTWQPED
A0A5D3BIM8 Pleiotropic drug resistance protein 1-like1.7e-3776.04Show/hide
Query:  MGSGKTVQGRGMCKGVTVGLPVMTIVDDFLPLELGNLDMVLGMQWLRKQGVMAVDWRELIMTFSVGETRVVLKGDPSLSRMEVSFKMLTKTWQPED
        MGSGK VQGRGMCKG+TVGLPV+T+V+DFLPL+LGN+DMVLGMQWL+KQG M VDW+ L MTF VG+T+V+LKGDPSL+RME+S K+L KTWQP+D
Subjt:  MGSGKTVQGRGMCKGVTVGLPVMTIVDDFLPLELGNLDMVLGMQWLRKQGVMAVDWRELIMTFSVGETRVVLKGDPSLSRMEVSFKMLTKTWQPED
A0A5D3CEX8 Ty3/gypsy retrotransposon protein2.9e-3776.04Show/hide
Query:  MGSGKTVQGRGMCKGVTVGLPVMTIVDDFLPLELGNLDMVLGMQWLRKQGVMAVDWRELIMTFSVGETRVVLKGDPSLSRMEVSFKMLTKTWQPED
        MGSGK VQGRG+CKG+TVGLPV++IV+DFLPLELGN+DMVLGMQWL+KQG M VDW+ L MTF VG+T+V+LKGDPSL+RME+S K+L KTWQP+D
Subjt:  MGSGKTVQGRGMCKGVTVGLPVMTIVDDFLPLELGNLDMVLGMQWLRKQGVMAVDWRELIMTFSVGETRVVLKGDPSLSRMEVSFKMLTKTWQPED
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G53705.1 aminoacyl-tRNA ligases;nucleotide binding;ATP binding1.4e-0433.33Show/hide
Query:  MGSGKTVQGRGMCKGVTVGLPVMTIVDDFLPLELG--NLDMVLGMQWLRKQGVMAVD
        MG G+ ++ +G C G+++ +    IV+D+L L+L   + D++LG +WL K G   ++
Subjt:  MGSGKTVQGRGMCKGVTVGLPVMTIVDDFLPLELG--NLDMVLGMQWLRKQGVMAVD
AT1G53705.2 aminoacyl-tRNA ligases;nucleotide binding;ATP binding1.4e-0433.33Show/hide
Query:  MGSGKTVQGRGMCKGVTVGLPVMTIVDDFLPLELG--NLDMVLGMQWLRKQGVMAVD
        MG G+ ++ +G C G+++ +    IV+D+L L+L   + D++LG +WL K G   ++
Subjt:  MGSGKTVQGRGMCKGVTVGLPVMTIVDDFLPLELG--NLDMVLGMQWLRKQGVMAVD
AT3G29750.1 Eukaryotic aspartyl protease family protein1.7e-0526.53Show/hide
Query:  MGSGKTVQGRGMCKGVTVGLPVMTIVDDFLPLELG--NLDMVLGMQWLRKQGVMAVDWRELIMTFSVGETRVVLKGD-PSLSRMEVSFKMLTKTWQPE
        +G  + +Q  G C G+ + +  + I ++FL L+L   ++D++LG +WL K G   V+W+    +FS  +  + L  +   L ++    KM ++  Q +
Subjt:  MGSGKTVQGRGMCKGVTVGLPVMTIVDDFLPLELG--NLDMVLGMQWLRKQGVMAVDWRELIMTFSVGETRVVLKGD-PSLSRMEVSFKMLTKTWQPE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTCTGGAAAGACGGTACAAGGGAGAGGAATGTGCAAAGGAGTTACGGTCGGATTGCCAGTAATGACCATAGTAGATGATTTCCTTCCGTTAGAACTTGGAAATTT
AGACATGGTGTTGGGTATGCAGTGGTTGCGTAAACAGGGGGTTATGGCAGTCGATTGGAGGGAGTTGATAATGACCTTCTCAGTAGGTGAGACTCGAGTAGTCCTCAAAG
GGGATCCATCCTTATCTCGAATGGAGGTGTCATTTAAGATGCTGACTAAAACGTGGCAACCGGAGGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGTCTGGAAAGACGGTACAAGGGAGAGGAATGTGCAAAGGAGTTACGGTCGGATTGCCAGTAATGACCATAGTAGATGATTTCCTTCCGTTAGAACTTGGAAATTT
AGACATGGTGTTGGGTATGCAGTGGTTGCGTAAACAGGGGGTTATGGCAGTCGATTGGAGGGAGTTGATAATGACCTTCTCAGTAGGTGAGACTCGAGTAGTCCTCAAAG
GGGATCCATCCTTATCTCGAATGGAGGTGTCATTTAAGATGCTGACTAAAACGTGGCAACCGGAGGACTAG
Protein sequenceShow/hide protein sequence
MGSGKTVQGRGMCKGVTVGLPVMTIVDDFLPLELGNLDMVLGMQWLRKQGVMAVDWRELIMTFSVGETRVVLKGDPSLSRMEVSFKMLTKTWQPED