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PI0027993 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027993
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGlial fibrillary acidic protein-like
Genome locationchr03:10931932..10933334
RNA-Seq ExpressionPI0027993
SyntenyPI0027993
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032013.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]2.6e-4946Show/hide
Query:  MTETFRSLNHCRIQGKGKFFNCAPMLFIWISRHLRCPNNFGYSQIKFSSPWNNARNTIREFNSAHWDPSAQEFRVLMHFFSHLTTEELVWRAPWVPTSPW
        MTETFRSLNHCRIQ                                   P+N+ R  +     A                 H + +  +W+  + PT   
Subjt:  MTETFRSLNHCRIQGKGKFFNCAPMLFIWISRHLRCPNNFGYSQIKFSSPWNNARNTIREFNSAHWDPSAQEFRVLMHFFSHLTTEELVWRAPWVPTSPW

Query:  TYRCGKLAFVPLLGLWGGFAYSPLLV---------------LQDWEFSYESGVANDKIHEAVEAWKFEKKIKSLRHCE----------------------
                 + L+G  GG AYSPLLV               L+DWEFSYES +AN+KIHEAVEAWKF KK+KSLRHCE                      
Subjt:  TYRCGKLAFVPLLGLWGGFAYSPLLV---------------LQDWEFSYESGVANDKIHEAVEAWKFEKKIKSLRHCE----------------------

Query:  KPLVPSIVSKKNHDNGERDLKRLREMNCVLAIENKKLREEVKRWVQQAVSAQRDLDEAKRKQSELVKDNDSLKIEVIQVRKKNKRLLRNIVDLHEETEAK
        + LVP+I  KK HD  E++LKRLREMNCV+A EN+KLREEVK+WVQQAV+ QRDLDEAKRK  EL K+NDSL  E IQVRKKNKRLLRNI +LHEE EAK
Subjt:  KPLVPSIVSKKNHDNGERDLKRLREMNCVLAIENKKLREEVKRWVQQAVSAQRDLDEAKRKQSELVKDNDSLKIEVIQVRKKNKRLLRNIVDLHEETEAK

KAA0033221.1 uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]3.0e-7747.66Show/hide
Query:  MTETFRSLNHCRIQGKGKFFNCAPMLFIWISRHLRCPNNFGYSQIKFSSPWNNARNTIREFNSAHWDPSAQEFRVLMHFFSHLTTEELVWRAPWVPTSPW
        M ETFRSLNHCRIQGKGKFF+CAPMLFIWIS HLR PNNFGY QIKF+SPWN  RNTIREFNSAHWDP   EF                           
Subjt:  MTETFRSLNHCRIQGKGKFFNCAPMLFIWISRHLRCPNNFGYSQIKFSSPWNNARNTIREFNSAHWDPSAQEFRVLMHFFSHLTTEELVWRAPWVPTSPW

Query:  TYRCGKLAFVPLLGLWGGFA--YSPLLV-LQDWEFSYESGVANDKIHEAVEAWKFEKKIKSLRHCE----------------------KPLVPSIVSKKN
            G +A+ PLL L   ++  ++P++  L+DWEFSYES +ANDKIHEAVEAWKF KK+KSLRHCE                      + LVP+I  KK 
Subjt:  TYRCGKLAFVPLLGLWGGFA--YSPLLV-LQDWEFSYESGVANDKIHEAVEAWKFEKKIKSLRHCE----------------------KPLVPSIVSKKN

Query:  HDNGERDLKRLREMNCVLAIENKKLREEVKRWVQQAVSAQRDLDEAKRKQSE-------LVKDNDSLKIEVIQVRKKNKRLLRNI---------------
        HD  E++LKRLREMNCVLA EN+KLREEVK+WVQQAV+  RDLDEAKRK+ E       L    +  K ++I+   KN  L + +               
Subjt:  HDNGERDLKRLREMNCVLAIENKKLREEVKRWVQQAVSAQRDLDEAKRKQSE-------LVKDNDSLKIEVIQVRKKNKRLLRNI---------------

Query:  -----------------VDLHEETEAKNILRHKYDG----------KLRQMARMADQFSVKAMTLRQGIVPTHDRTENCLVFYG
                         +D     +    LR KYD           KLRQMAR+ADQFSV+A TLRQG++PT D  +    F G
Subjt:  -----------------VDLHEETEAKNILRHKYDG----------KLRQMARMADQFSVKAMTLRQGIVPTHDRTENCLVFYG

KAA0036941.1 girdin-like [Cucumis melo var. makuwa]5.9e-4135.19Show/hide
Query:  MTETFRSLNHCRIQGKGKFFNCAPMLFIWISRHLRCPNNFGYSQIKFSSPWNNARNTIREFNSAHWDPSAQEFRVLMHFFSHLTTEELVWRAPWVPTSPW
        + ETFRSLN+CR +G+GK   C P+L+IWI  H++ P  F   ++ FSSPWN  RNTI EF  A WDP+       + FF+ LT+E ++W+A W+P    
Subjt:  MTETFRSLNHCRIQGKGKFFNCAPMLFIWISRHLRCPNNFGYSQIKFSSPWNNARNTIREFNSAHWDPSAQEFRVLMHFFSHLTTEELVWRAPWVPTSPW

Query:  TYRCGKLAFVPLLGLWGGFAYSPLLV---------------LQDWEFSYESGVANDKIHEAVEAWKFEKKIKSLRHCEKPLVPSIVSKKNHDNGERDLKR
         YRCG    VPLLG WGG  Y+PLLV               LQ+ +FSY+      K  +AV AWK  +KIK   H E         + N      D+ R
Subjt:  TYRCGKLAFVPLLGLWGGFAYSPLLV---------------LQDWEFSYESGVANDKIHEAVEAWKFEKKIKSLRHCEKPLVPSIVSKKNHDNGERDLKR

Query:  -----------------------LREMNCVLAIENKKLREEVKRWVQQAVSAQRDLDEAK---RKQSELVKDNDSLKIEVIQVRKKNKRL------LRNI
                               L E N +L  EN+KLR+E  +W+  A   Q +L++ K   + Q +L KD ++L  E+ ++ K N+ L      L+  
Subjt:  -----------------------LREMNCVLAIENKKLREEVKRWVQQAVSAQRDLDEAK---RKQSELVKDNDSLKIEVIQVRKKNKRL------LRNI

Query:  VDLH----EETEAKNILRHKYDGKLRQMARMADQFSVKAMT
        V LH    E +E   IL++  D    Q+  +  Q S K +T
Subjt:  VDLH----EETEAKNILRHKYDGKLRQMARMADQFSVKAMT

KAA0065295.1 uncharacterized protein E6C27_scaffold1023G00080 [Cucumis melo var. makuwa]2.3e-5382.2Show/hide
Query:  MTETFRSLNHCRIQGKGKFFNCAPMLFIWISRHLRCPNNFGYSQIKFSSPWNNARNTIREFNSAHWDPSAQEFRVLMHFFSHLTTEELVWRAPWVPTSPW
        M ETFRSLNHC+IQGKGKFF+CAPMLFIWIS HLR PNNFGY QIKFSSPWN  RNTIREFNSAHWDP   EF V M FFSHLTT E +WRAPW+PTSP 
Subjt:  MTETFRSLNHCRIQGKGKFFNCAPMLFIWISRHLRCPNNFGYSQIKFSSPWNNARNTIREFNSAHWDPSAQEFRVLMHFFSHLTTEELVWRAPWVPTSPW

Query:  TYRCGKLAFVPLLGLWGG
        TYRCGKLAF+ LLGLWGG
Subjt:  TYRCGKLAFVPLLGLWGG

TYK16834.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.6e-10769.1Show/hide
Query:  MTETFRSLNHCRIQGKGKFFNCAPMLFIWISRHLRCPNNFGYSQIKFSSPWNNARNTIREFNSAHWDPSAQEFRVLMHFFSHLTTEELVWRAPWVPTSPW
        MTETFRSLNHCRIQGKGKFF+CAPMLFIWIS HLR PNNFGY QIKFSSPWNN RNTIREFNSAHWDP   EF V M FFSHLTT + +WRAPW+ TSP 
Subjt:  MTETFRSLNHCRIQGKGKFFNCAPMLFIWISRHLRCPNNFGYSQIKFSSPWNNARNTIREFNSAHWDPSAQEFRVLMHFFSHLTTEELVWRAPWVPTSPW

Query:  TYRCGKLAFVPLLGLW-GGFAYSPLLV---------------LQDWEFSYESGVANDKIHEAVEAWKFEKKIKSLRHCE---------------------
        T+RCGKLA + LLGLW GG AYSPLLV               L+DWEFSYES +AN+KIHEAVEAWKF KK+KSLRHCE                     
Subjt:  TYRCGKLAFVPLLGLW-GGFAYSPLLV---------------LQDWEFSYESGVANDKIHEAVEAWKFEKKIKSLRHCE---------------------

Query:  -KPLVPSIVSKKNHDNGERDLKRLREMNCVLAIENKKLREEVKRWVQQAVSAQRDLDEAKRKQSELVKDNDSLKIEVIQVRKKNKRLLRNIVDLHEETEA
         + LVP+I  KK HD  E++LKRLREMNCV+A EN+KLREEVK+WVQQAV+ QRDLDEAKRK  EL K+NDSL  E IQVRKKNKRLLRNI +LHEE EA
Subjt:  -KPLVPSIVSKKNHDNGERDLKRLREMNCVLAIENKKLREEVKRWVQQAVSAQRDLDEAKRKQSELVKDNDSLKIEVIQVRKKNKRLLRNIVDLHEETEA

Query:  K
        K
Subjt:  K

TrEMBL top hitse value%identityAlignment
A0A5A7SNY0 Glial fibrillary acidic protein-like1.3e-4946Show/hide
Query:  MTETFRSLNHCRIQGKGKFFNCAPMLFIWISRHLRCPNNFGYSQIKFSSPWNNARNTIREFNSAHWDPSAQEFRVLMHFFSHLTTEELVWRAPWVPTSPW
        MTETFRSLNHCRIQ                                   P+N+ R  +     A                 H + +  +W+  + PT   
Subjt:  MTETFRSLNHCRIQGKGKFFNCAPMLFIWISRHLRCPNNFGYSQIKFSSPWNNARNTIREFNSAHWDPSAQEFRVLMHFFSHLTTEELVWRAPWVPTSPW

Query:  TYRCGKLAFVPLLGLWGGFAYSPLLV---------------LQDWEFSYESGVANDKIHEAVEAWKFEKKIKSLRHCE----------------------
                 + L+G  GG AYSPLLV               L+DWEFSYES +AN+KIHEAVEAWKF KK+KSLRHCE                      
Subjt:  TYRCGKLAFVPLLGLWGGFAYSPLLV---------------LQDWEFSYESGVANDKIHEAVEAWKFEKKIKSLRHCE----------------------

Query:  KPLVPSIVSKKNHDNGERDLKRLREMNCVLAIENKKLREEVKRWVQQAVSAQRDLDEAKRKQSELVKDNDSLKIEVIQVRKKNKRLLRNIVDLHEETEAK
        + LVP+I  KK HD  E++LKRLREMNCV+A EN+KLREEVK+WVQQAV+ QRDLDEAKRK  EL K+NDSL  E IQVRKKNKRLLRNI +LHEE EAK
Subjt:  KPLVPSIVSKKNHDNGERDLKRLREMNCVLAIENKKLREEVKRWVQQAVSAQRDLDEAKRKQSELVKDNDSLKIEVIQVRKKNKRLLRNIVDLHEETEAK

A0A5A7SUT0 Reverse transcriptase1.4e-7747.66Show/hide
Query:  MTETFRSLNHCRIQGKGKFFNCAPMLFIWISRHLRCPNNFGYSQIKFSSPWNNARNTIREFNSAHWDPSAQEFRVLMHFFSHLTTEELVWRAPWVPTSPW
        M ETFRSLNHCRIQGKGKFF+CAPMLFIWIS HLR PNNFGY QIKF+SPWN  RNTIREFNSAHWDP   EF                           
Subjt:  MTETFRSLNHCRIQGKGKFFNCAPMLFIWISRHLRCPNNFGYSQIKFSSPWNNARNTIREFNSAHWDPSAQEFRVLMHFFSHLTTEELVWRAPWVPTSPW

Query:  TYRCGKLAFVPLLGLWGGFA--YSPLLV-LQDWEFSYESGVANDKIHEAVEAWKFEKKIKSLRHCE----------------------KPLVPSIVSKKN
            G +A+ PLL L   ++  ++P++  L+DWEFSYES +ANDKIHEAVEAWKF KK+KSLRHCE                      + LVP+I  KK 
Subjt:  TYRCGKLAFVPLLGLWGGFA--YSPLLV-LQDWEFSYESGVANDKIHEAVEAWKFEKKIKSLRHCE----------------------KPLVPSIVSKKN

Query:  HDNGERDLKRLREMNCVLAIENKKLREEVKRWVQQAVSAQRDLDEAKRKQSE-------LVKDNDSLKIEVIQVRKKNKRLLRNI---------------
        HD  E++LKRLREMNCVLA EN+KLREEVK+WVQQAV+  RDLDEAKRK+ E       L    +  K ++I+   KN  L + +               
Subjt:  HDNGERDLKRLREMNCVLAIENKKLREEVKRWVQQAVSAQRDLDEAKRKQSE-------LVKDNDSLKIEVIQVRKKNKRLLRNI---------------

Query:  -----------------VDLHEETEAKNILRHKYDG----------KLRQMARMADQFSVKAMTLRQGIVPTHDRTENCLVFYG
                         +D     +    LR KYD           KLRQMAR+ADQFSV+A TLRQG++PT D  +    F G
Subjt:  -----------------VDLHEETEAKNILRHKYDG----------KLRQMARMADQFSVKAMTLRQGIVPTHDRTENCLVFYG

A0A5A7T5S7 Girdin-like2.8e-4135.19Show/hide
Query:  MTETFRSLNHCRIQGKGKFFNCAPMLFIWISRHLRCPNNFGYSQIKFSSPWNNARNTIREFNSAHWDPSAQEFRVLMHFFSHLTTEELVWRAPWVPTSPW
        + ETFRSLN+CR +G+GK   C P+L+IWI  H++ P  F   ++ FSSPWN  RNTI EF  A WDP+       + FF+ LT+E ++W+A W+P    
Subjt:  MTETFRSLNHCRIQGKGKFFNCAPMLFIWISRHLRCPNNFGYSQIKFSSPWNNARNTIREFNSAHWDPSAQEFRVLMHFFSHLTTEELVWRAPWVPTSPW

Query:  TYRCGKLAFVPLLGLWGGFAYSPLLV---------------LQDWEFSYESGVANDKIHEAVEAWKFEKKIKSLRHCEKPLVPSIVSKKNHDNGERDLKR
         YRCG    VPLLG WGG  Y+PLLV               LQ+ +FSY+      K  +AV AWK  +KIK   H E         + N      D+ R
Subjt:  TYRCGKLAFVPLLGLWGGFAYSPLLV---------------LQDWEFSYESGVANDKIHEAVEAWKFEKKIKSLRHCEKPLVPSIVSKKNHDNGERDLKR

Query:  -----------------------LREMNCVLAIENKKLREEVKRWVQQAVSAQRDLDEAK---RKQSELVKDNDSLKIEVIQVRKKNKRL------LRNI
                               L E N +L  EN+KLR+E  +W+  A   Q +L++ K   + Q +L KD ++L  E+ ++ K N+ L      L+  
Subjt:  -----------------------LREMNCVLAIENKKLREEVKRWVQQAVSAQRDLDEAK---RKQSELVKDNDSLKIEVIQVRKKNKRL------LRNI

Query:  VDLH----EETEAKNILRHKYDGKLRQMARMADQFSVKAMT
        V LH    E +E   IL++  D    Q+  +  Q S K +T
Subjt:  VDLH----EETEAKNILRHKYDGKLRQMARMADQFSVKAMT

A0A5A7VHI3 Uncharacterized protein1.1e-5382.2Show/hide
Query:  MTETFRSLNHCRIQGKGKFFNCAPMLFIWISRHLRCPNNFGYSQIKFSSPWNNARNTIREFNSAHWDPSAQEFRVLMHFFSHLTTEELVWRAPWVPTSPW
        M ETFRSLNHC+IQGKGKFF+CAPMLFIWIS HLR PNNFGY QIKFSSPWN  RNTIREFNSAHWDP   EF V M FFSHLTT E +WRAPW+PTSP 
Subjt:  MTETFRSLNHCRIQGKGKFFNCAPMLFIWISRHLRCPNNFGYSQIKFSSPWNNARNTIREFNSAHWDPSAQEFRVLMHFFSHLTTEELVWRAPWVPTSPW

Query:  TYRCGKLAFVPLLGLWGG
        TYRCGKLAF+ LLGLWGG
Subjt:  TYRCGKLAFVPLLGLWGG

A0A5D3D0S2 Glial fibrillary acidic protein-like7.8e-10869.1Show/hide
Query:  MTETFRSLNHCRIQGKGKFFNCAPMLFIWISRHLRCPNNFGYSQIKFSSPWNNARNTIREFNSAHWDPSAQEFRVLMHFFSHLTTEELVWRAPWVPTSPW
        MTETFRSLNHCRIQGKGKFF+CAPMLFIWIS HLR PNNFGY QIKFSSPWNN RNTIREFNSAHWDP   EF V M FFSHLTT + +WRAPW+ TSP 
Subjt:  MTETFRSLNHCRIQGKGKFFNCAPMLFIWISRHLRCPNNFGYSQIKFSSPWNNARNTIREFNSAHWDPSAQEFRVLMHFFSHLTTEELVWRAPWVPTSPW

Query:  TYRCGKLAFVPLLGLW-GGFAYSPLLV---------------LQDWEFSYESGVANDKIHEAVEAWKFEKKIKSLRHCE---------------------
        T+RCGKLA + LLGLW GG AYSPLLV               L+DWEFSYES +AN+KIHEAVEAWKF KK+KSLRHCE                     
Subjt:  TYRCGKLAFVPLLGLW-GGFAYSPLLV---------------LQDWEFSYESGVANDKIHEAVEAWKFEKKIKSLRHCE---------------------

Query:  -KPLVPSIVSKKNHDNGERDLKRLREMNCVLAIENKKLREEVKRWVQQAVSAQRDLDEAKRKQSELVKDNDSLKIEVIQVRKKNKRLLRNIVDLHEETEA
         + LVP+I  KK HD  E++LKRLREMNCV+A EN+KLREEVK+WVQQAV+ QRDLDEAKRK  EL K+NDSL  E IQVRKKNKRLLRNI +LHEE EA
Subjt:  -KPLVPSIVSKKNHDNGERDLKRLREMNCVLAIENKKLREEVKRWVQQAVSAQRDLDEAKRKQSELVKDNDSLKIEVIQVRKKNKRLLRNIVDLHEETEA

Query:  K
        K
Subjt:  K

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGAGACTTTCAGATCACTAAATCATTGTCGAATTCAAGGCAAAGGAAAATTCTTCAATTGTGCTCCTATGCTTTTTATTTGGATTTCTAGACATCTAAGGTGTCC
TAATAATTTTGGATACTCTCAAATAAAATTCAGTAGTCCGTGGAATAATGCAAGAAACACTATCAGAGAATTCAATAGTGCACATTGGGATCCAAGTGCTCAAGAATTTC
GAGTTTTGATGCATTTTTTCAGCCATTTAACGACAGAGGAGTTAGTCTGGAGAGCTCCTTGGGTGCCCACAAGTCCTTGGACATATCGCTGTGGGAAATTGGCTTTTGTC
CCACTATTGGGCCTATGGGGAGGTTTTGCTTACTCTCCTCTTTTGGTACTACAGGATTGGGAATTCTCATATGAGTCAGGCGTAGCAAATGACAAAATTCATGAAGCAGT
TGAGGCATGGAAATTCGAAAAGAAAATAAAGAGCTTGCGACATTGTGAGAAGCCTTTAGTTCCAAGCATAGTGTCAAAGAAAAATCACGACAATGGAGAGAGGGATTTGA
AAAGGTTAAGAGAAATGAATTGTGTTTTGGCAATAGAAAACAAAAAGTTGAGAGAAGAAGTCAAAAGATGGGTCCAACAAGCTGTTAGTGCTCAAAGAGATTTGGACGAG
GCAAAACGAAAGCAATCAGAGCTGGTGAAGGATAACGATTCTTTAAAAATTGAGGTGATCCAAGTGAGAAAAAAGAATAAGAGATTATTACGGAACATTGTTGACTTGCA
TGAAGAAACAGAAGCTAAAAACATACTGAGACACAAGTATGATGGTAAATTAAGACAAATGGCGAGGATGGCAGATCAATTCTCAGTGAAAGCTATGACCCTCCGACAAG
GCATTGTACCCACACATGATAGAACAGAGAATTGTCTCGTTTTCTATGGATCATAG
mRNA sequenceShow/hide mRNA sequence
ATGACAGAGACTTTCAGATCACTAAATCATTGTCGAATTCAAGGCAAAGGAAAATTCTTCAATTGTGCTCCTATGCTTTTTATTTGGATTTCTAGACATCTAAGGTGTCC
TAATAATTTTGGATACTCTCAAATAAAATTCAGTAGTCCGTGGAATAATGCAAGAAACACTATCAGAGAATTCAATAGTGCACATTGGGATCCAAGTGCTCAAGAATTTC
GAGTTTTGATGCATTTTTTCAGCCATTTAACGACAGAGGAGTTAGTCTGGAGAGCTCCTTGGGTGCCCACAAGTCCTTGGACATATCGCTGTGGGAAATTGGCTTTTGTC
CCACTATTGGGCCTATGGGGAGGTTTTGCTTACTCTCCTCTTTTGGTACTACAGGATTGGGAATTCTCATATGAGTCAGGCGTAGCAAATGACAAAATTCATGAAGCAGT
TGAGGCATGGAAATTCGAAAAGAAAATAAAGAGCTTGCGACATTGTGAGAAGCCTTTAGTTCCAAGCATAGTGTCAAAGAAAAATCACGACAATGGAGAGAGGGATTTGA
AAAGGTTAAGAGAAATGAATTGTGTTTTGGCAATAGAAAACAAAAAGTTGAGAGAAGAAGTCAAAAGATGGGTCCAACAAGCTGTTAGTGCTCAAAGAGATTTGGACGAG
GCAAAACGAAAGCAATCAGAGCTGGTGAAGGATAACGATTCTTTAAAAATTGAGGTGATCCAAGTGAGAAAAAAGAATAAGAGATTATTACGGAACATTGTTGACTTGCA
TGAAGAAACAGAAGCTAAAAACATACTGAGACACAAGTATGATGGTAAATTAAGACAAATGGCGAGGATGGCAGATCAATTCTCAGTGAAAGCTATGACCCTCCGACAAG
GCATTGTACCCACACATGATAGAACAGAGAATTGTCTCGTTTTCTATGGATCATAG
Protein sequenceShow/hide protein sequence
MTETFRSLNHCRIQGKGKFFNCAPMLFIWISRHLRCPNNFGYSQIKFSSPWNNARNTIREFNSAHWDPSAQEFRVLMHFFSHLTTEELVWRAPWVPTSPWTYRCGKLAFV
PLLGLWGGFAYSPLLVLQDWEFSYESGVANDKIHEAVEAWKFEKKIKSLRHCEKPLVPSIVSKKNHDNGERDLKRLREMNCVLAIENKKLREEVKRWVQQAVSAQRDLDE
AKRKQSELVKDNDSLKIEVIQVRKKNKRLLRNIVDLHEETEAKNILRHKYDGKLRQMARMADQFSVKAMTLRQGIVPTHDRTENCLVFYGS