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PI0028019 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028019
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchr02:18785213..18785481
RNA-Seq ExpressionPI0028019
SyntenyPI0028019
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044308.1 uncharacterized protein E6C27_scaffold46G00290 [Cucumis melo var. makuwa]1.3e-2384.85Show/hide
Query:  YWPELSFIEVRPNANLLREPDRPRTTRIQNEIDWKESGQSVRCTICKAEGHNRRTCPQRA-SSSRH
        YWPELSF EVRPNA+LL+ P RPRTTRI NE+DWKESGQS+RCTICK EGHNRRTCPQRA SSSRH
Subjt:  YWPELSFIEVRPNANLLREPDRPRTTRIQNEIDWKESGQSVRCTICKAEGHNRRTCPQRA-SSSRH

KAA0063901.1 hypothetical protein E6C27_scaffold616G00270 [Cucumis melo var. makuwa]2.5e-2486.36Show/hide
Query:  YWPELSFIEVRPNANLLREPDRPRTTRIQNEIDWKESGQSVRCTICKAEGHNRRTCPQRA-SSSRH
        YWPELSF EVRPNANLL+ PDRPRTTRI NE+DWKESGQS+RCTICK EGHNRR CPQRA SSSRH
Subjt:  YWPELSFIEVRPNANLLREPDRPRTTRIQNEIDWKESGQSVRCTICKAEGHNRRTCPQRA-SSSRH

KGN51592.1 hypothetical protein Csa_008873 [Cucumis sativus]2.5e-2479.17Show/hide
Query:  MTATYYYWPELSFIEVRPNANLLREPDRPRTTRIQNEIDWKESGQSVRCTICKAEGHNRRTCPQRA-SSSRH
        M AT+YYW E+SF EVRPNA+LL+EP RPRTTRIQNE+DWKES QS+RCT+ K EGHNRRTCPQRA SSSRH
Subjt:  MTATYYYWPELSFIEVRPNANLLREPDRPRTTRIQNEIDWKESGQSVRCTICKAEGHNRRTCPQRA-SSSRH

TYK02543.1 uncharacterized protein E5676_scaffold201G00230 [Cucumis melo var. makuwa]1.3e-2384.85Show/hide
Query:  YWPELSFIEVRPNANLLREPDRPRTTRIQNEIDWKESGQSVRCTICKAEGHNRRTCPQRA-SSSRH
        YWPELSF EVRPNA+LL+ P RPRTTRI NE+DWKESGQS+RCTICK EGHNRRTCPQRA SSSRH
Subjt:  YWPELSFIEVRPNANLLREPDRPRTTRIQNEIDWKESGQSVRCTICKAEGHNRRTCPQRA-SSSRH

XP_031737534.1 uncharacterized protein LOC116402427 [Cucumis sativus]1.5e-2483.08Show/hide
Query:  YWPELSFIEVRPNANLLREPDRPRTTRIQNEIDWKESGQSVRCTICKAEGHNRRTCPQRASSSRH
        YWPE+SF EVRPNA+LL+ P RPRTTRIQNE+DWKES QS+RCTICK EGHNRRTCP+RASSSRH
Subjt:  YWPELSFIEVRPNANLLREPDRPRTTRIQNEIDWKESGQSVRCTICKAEGHNRRTCPQRASSSRH

TrEMBL top hitse value%identityAlignment
A0A0A0KT57 Uncharacterized protein1.2e-2479.17Show/hide
Query:  MTATYYYWPELSFIEVRPNANLLREPDRPRTTRIQNEIDWKESGQSVRCTICKAEGHNRRTCPQRA-SSSRH
        M AT+YYW E+SF EVRPNA+LL+EP RPRTTRIQNE+DWKES QS+RCT+ K EGHNRRTCPQRA SSSRH
Subjt:  MTATYYYWPELSFIEVRPNANLLREPDRPRTTRIQNEIDWKESGQSVRCTICKAEGHNRRTCPQRA-SSSRH

A0A5A7SW50 SWIM-type domain-containing protein1.8e-2383.33Show/hide
Query:  YWPELSFIEVRPNANLLREPDRPRTTRIQNEIDWKESGQSVRCTICKAEGHNRRTCPQRA-SSSRH
        YWPELSF E+RPNA+LL+ P RPRTTRI NE+DWKESGQS+RCTICK EGHNRRTCPQRA SSSRH
Subjt:  YWPELSFIEVRPNANLLREPDRPRTTRIQNEIDWKESGQSVRCTICKAEGHNRRTCPQRA-SSSRH

A0A5A7TN56 SWIM-type domain-containing protein6.1e-2484.85Show/hide
Query:  YWPELSFIEVRPNANLLREPDRPRTTRIQNEIDWKESGQSVRCTICKAEGHNRRTCPQRA-SSSRH
        YWPELSF EVRPNA+LL+ P RPRTTRI NE+DWKESGQS+RCTICK EGHNRRTCPQRA SSSRH
Subjt:  YWPELSFIEVRPNANLLREPDRPRTTRIQNEIDWKESGQSVRCTICKAEGHNRRTCPQRA-SSSRH

A0A5A7VDU8 SWIM-type domain-containing protein1.2e-2486.36Show/hide
Query:  YWPELSFIEVRPNANLLREPDRPRTTRIQNEIDWKESGQSVRCTICKAEGHNRRTCPQRA-SSSRH
        YWPELSF EVRPNANLL+ PDRPRTTRI NE+DWKESGQS+RCTICK EGHNRR CPQRA SSSRH
Subjt:  YWPELSFIEVRPNANLLREPDRPRTTRIQNEIDWKESGQSVRCTICKAEGHNRRTCPQRA-SSSRH

A0A5D3BS92 SWIM-type domain-containing protein6.1e-2484.85Show/hide
Query:  YWPELSFIEVRPNANLLREPDRPRTTRIQNEIDWKESGQSVRCTICKAEGHNRRTCPQRA-SSSRH
        YWPELSF EVRPNA+LL+ P RPRTTRI NE+DWKESGQS+RCTICK EGHNRRTCPQRA SSSRH
Subjt:  YWPELSFIEVRPNANLLREPDRPRTTRIQNEIDWKESGQSVRCTICKAEGHNRRTCPQRA-SSSRH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGCTACTTATTACTACTGGCCAGAGTTATCATTCATTGAAGTTCGCCCAAATGCGAACTTACTTAGAGAACCCGATCGACCTAGAACTACGAGGATCCAGAATGA
AATAGATTGGAAGGAGTCCGGTCAATCAGTAAGATGCACAATATGTAAAGCGGAAGGACATAACAGACGTACTTGTCCTCAACGTGCATCTTCTTCAAGACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTGCTACTTATTACTACTGGCCAGAGTTATCATTCATTGAAGTTCGCCCAAATGCGAACTTACTTAGAGAACCCGATCGACCTAGAACTACGAGGATCCAGAATGA
AATAGATTGGAAGGAGTCCGGTCAATCAGTAAGATGCACAATATGTAAAGCGGAAGGACATAACAGACGTACTTGTCCTCAACGTGCATCTTCTTCAAGACATTGA
Protein sequenceShow/hide protein sequence
MTATYYYWPELSFIEVRPNANLLREPDRPRTTRIQNEIDWKESGQSVRCTICKAEGHNRRTCPQRASSSRH