; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0028028 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028028
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDNA-directed RNA polymerase V subunit 7
Genome locationchr05:18711258..18713722
RNA-Seq ExpressionPI0028028
SyntenyPI0028028
Gene Ontology termsGO:0006352 - DNA-templated transcription, initiation (biological process)
GO:0006412 - translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0003727 - single-stranded RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsIPR012340 - Nucleic acid-binding, OB-fold
IPR036898 - RNA polymerase Rpb7-like, N-terminal domain superfamily
IPR045113 - RNA polymerase Rpb7-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150402.1 DNA-directed RNA polymerase V subunit 7 [Cucumis sativus]7.5e-94100Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHGV
        MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHGV
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS

XP_008465191.1 PREDICTED: DNA-directed RNA polymerase V subunit 7 [Cucumis melo]2.8e-9399.43Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHGV
        MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPV FSGITFKLYRGEILEGVVHKVLKHGV
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS

XP_022138329.1 DNA-directed RNA polymerase V subunit 7 [Momordica charantia]3.7e-9398.29Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHGV
        MFLKVQLPWNVIIP+ENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPV+FSGITFKLYRGEILEGVVHKVLKHGV
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        FLRCGPVENIYLSYLKMPDYRYVPGENPVF+NDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS

XP_022958784.1 DNA-directed RNA polymerase V subunit 7 [Cucurbita moschata]3.7e-9398.29Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHGV
        MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPV+FSGITFKLYRGEILEGVVHKVLKHGV
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        FLRCGPVENIYLSYLKMPDYRYVPGENP+F+NDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS

XP_023006755.1 DNA-directed RNA polymerase V subunit 7 [Cucurbita maxima]2.8e-9398.86Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHGV
        MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHGV
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        FLRCGPVENIYLSYLKMPDYRYVPGENP+F+NDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS

TrEMBL top hitse value%identityAlignment
A0A0A0LKQ1 Uncharacterized protein3.6e-94100Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHGV
        MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHGV
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS

A0A1S3CNB4 DNA-directed RNA polymerase V subunit 71.4e-9399.43Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHGV
        MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPV FSGITFKLYRGEILEGVVHKVLKHGV
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS

A0A5D3CAJ0 DNA-directed RNA polymerase V subunit 71.4e-9399.43Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHGV
        MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPV FSGITFKLYRGEILEGVVHKVLKHGV
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS

A0A6J1H315 DNA-directed RNA polymerase V subunit 71.8e-9398.29Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHGV
        MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPV+FSGITFKLYRGEILEGVVHKVLKHGV
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        FLRCGPVENIYLSYLKMPDYRYVPGENP+F+NDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS

A0A6J1KYN2 DNA-directed RNA polymerase V subunit 71.4e-9398.86Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHGV
        MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHGV
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        FLRCGPVENIYLSYLKMPDYRYVPGENP+F+NDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS

SwissProt top hitse value%identityAlignment
A6QRA1 DNA-directed RNA polymerase V subunit 78.6e-7772.16Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQ-TGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHG
        MFLKVQLPWNV+IPAEN+DAKGLML+R+I++ LL+ FA+KKATK+LGY++AVTTL+ IGEGK+R+ TG+VLFPV+FSG+TFK+++GEI+ GVVHKVLKHG
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQ-TGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHG

Query:  VFLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        VF+RCGP+EN+YLSY KMPDY+Y+PGENP+F+N+K S+I+ +  VR +VIG KW+E EREFQAL SLEGDYLGP+S
Subjt:  VFLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS

P38421 DNA-directed RNA polymerase II subunit 78.0e-1432.12Show/hide
Query:  KGLMLQRSIIIRLLDEFATKKATKDL--------GYFLAVTTLENIGEGKVRQ-TGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHGVFLRCGPVENIY
        + + L      R L E    K  KD+        G+ +A+T ++ IG+G +R  TG V FPV +  + F+ ++GEILE VV  V K G F   GPV+   
Subjt:  KGLMLQRSIIIRLLDEFATKKATKDL--------GYFLAVTTLENIGEGKVRQ-TGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHGVFLRCGPVENIY

Query:  LSYLKMPDYRYVPGENPVF-LNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
          +L   D  +  G+ P +  +D   KI+K+  VR  +IGT+ ++A   F  + +++ D+LG ++
Subjt:  LSYLKMPDYRYVPGENPVF-LNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS

P46279 DNA-directed RNA polymerase II subunit RPB71.9e-1538.17Show/hide
Query:  GYFLAVTTLENIGEGKVRQ-TGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHGVFLRCGPVENIYLSYLKMPDYRYVPGENPVF-LNDKLSKIEKDVVV
        G+ +AVT +ENIG+G +R  TG V FPV +  + F+ ++GEILE VV  V K G F   GPV+    ++L   D  +  G+ P +  +D   KI+KD  V
Subjt:  GYFLAVTTLENIGEGKVRQ-TGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHGVFLRCGPVENIYLSYLKMPDYRYVPGENPVF-LNDKLSKIEKDVVV

Query:  RFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        R  +IGT+ ++A   F  + +++ D+LG ++
Subjt:  RFIVIGTKWLEAEREFQALVSLEGDYLGPVS

Q6NML5 DNA-directed RNA polymerase subunit 7-like protein3.8e-2438.34Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGK--------VRQTGDVLFPVIFSGITFKLYRGEILEGVV
        MF +V++  +V I A++L+  G    + I+ RLL +   +KA ++ G++L +T L++IG  K          Q   + FPV F+  TF   RG+IL+G V
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGK--------VRQTGDVLFPVIFSGITFKLYRGEILEGVV

Query:  HKVLKHGVFLRCGPVENIYLSYLKMPDYRYV-----PGENPVFLNDKLSKIEKDVVVRFIVIGTKWLE----AEREFQALVSLEGD-YLGPVS
         KVL +G F+R GP+   YLS LKMP Y YV       E P F  D LSKI   VVVRF V+  ++ E       ++  L +LEG+   GP+S
Subjt:  HKVLKHGVFLRCGPVENIYLSYLKMPDYRYV-----PGENPVFLNDKLSKIEKDVVVRFIVIGTKWLE----AEREFQALVSLEGD-YLGPVS

Q8LE42 DNA-directed RNA polymerase IV subunit 71.4e-5860.34Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVR-QTGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHG
        MF+KV+LPW+V IPAE++D  GLMLQR+I+IRLL+ F+ +KATKDLGY +  T LENIGEGK++ QTG++ FPV+F+GI FK+++GEI+ GVVHKV K G
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVR-QTGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHG

Query:  VFLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGP
        VFL+ GP E IYLS++KMP Y ++PGENP F+N  +S+I+    VRF+V+ T+W EAE++F AL S++GD LGP
Subjt:  VFLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGP

Arabidopsis top hitse value%identityAlignment
AT3G22900.1 RNA polymerase Rpb7-like, N-terminal domain9.9e-6060.34Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVR-QTGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHG
        MF+KV+LPW+V IPAE++D  GLMLQR+I+IRLL+ F+ +KATKDLGY +  T LENIGEGK++ QTG++ FPV+F+GI FK+++GEI+ GVVHKV K G
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVR-QTGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHG

Query:  VFLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGP
        VFL+ GP E IYLS++KMP Y ++PGENP F+N  +S+I+    VRF+V+ T+W EAE++F AL S++GD LGP
Subjt:  VFLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGP

AT4G14520.1 DNA-directed RNA polymerase II-related2.7e-2538.34Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGK--------VRQTGDVLFPVIFSGITFKLYRGEILEGVV
        MF +V++  +V I A++L+  G    + I+ RLL +   +KA ++ G++L +T L++IG  K          Q   + FPV F+  TF   RG+IL+G V
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGK--------VRQTGDVLFPVIFSGITFKLYRGEILEGVV

Query:  HKVLKHGVFLRCGPVENIYLSYLKMPDYRYV-----PGENPVFLNDKLSKIEKDVVVRFIVIGTKWLE----AEREFQALVSLEGD-YLGPVS
         KVL +G F+R GP+   YLS LKMP Y YV       E P F  D LSKI   VVVRF V+  ++ E       ++  L +LEG+   GP+S
Subjt:  HKVLKHGVFLRCGPVENIYLSYLKMPDYRYV-----PGENPVFLNDKLSKIEKDVVVRFIVIGTKWLE----AEREFQALVSLEGD-YLGPVS

AT4G14520.2 DNA-directed RNA polymerase II-related2.7e-2538.34Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGK--------VRQTGDVLFPVIFSGITFKLYRGEILEGVV
        MF +V++  +V I A++L+  G    + I+ RLL +   +KA ++ G++L +T L++IG  K          Q   + FPV F+  TF   RG+IL+G V
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGK--------VRQTGDVLFPVIFSGITFKLYRGEILEGVV

Query:  HKVLKHGVFLRCGPVENIYLSYLKMPDYRYV-----PGENPVFLNDKLSKIEKDVVVRFIVIGTKWLE----AEREFQALVSLEGD-YLGPVS
         KVL +G F+R GP+   YLS LKMP Y YV       E P F  D LSKI   VVVRF V+  ++ E       ++  L +LEG+   GP+S
Subjt:  HKVLKHGVFLRCGPVENIYLSYLKMPDYRYV-----PGENPVFLNDKLSKIEKDVVVRFIVIGTKWLE----AEREFQALVSLEGD-YLGPVS

AT4G14520.3 DNA-directed RNA polymerase II-related2.7e-2538.34Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGK--------VRQTGDVLFPVIFSGITFKLYRGEILEGVV
        MF +V++  +V I A++L+  G    + I+ RLL +   +KA ++ G++L +T L++IG  K          Q   + FPV F+  TF   RG+IL+G V
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGK--------VRQTGDVLFPVIFSGITFKLYRGEILEGVV

Query:  HKVLKHGVFLRCGPVENIYLSYLKMPDYRYV-----PGENPVFLNDKLSKIEKDVVVRFIVIGTKWLE----AEREFQALVSLEGD-YLGPVS
         KVL +G F+R GP+   YLS LKMP Y YV       E P F  D LSKI   VVVRF V+  ++ E       ++  L +LEG+   GP+S
Subjt:  HKVLKHGVFLRCGPVENIYLSYLKMPDYRYV-----PGENPVFLNDKLSKIEKDVVVRFIVIGTKWLE----AEREFQALVSLEGD-YLGPVS

AT4G14660.1 RNA polymerase Rpb7-like, N-terminal domain6.1e-7872.16Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQ-TGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHG
        MFLKVQLPWNV+IPAEN+DAKGLML+R+I++ LL+ FA+KKATK+LGY++AVTTL+ IGEGK+R+ TG+VLFPV+FSG+TFK+++GEI+ GVVHKVLKHG
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQ-TGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHG

Query:  VFLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        VF+RCGP+EN+YLSY KMPDY+Y+PGENP+F+N+K S+I+ +  VR +VIG KW+E EREFQAL SLEGDYLGP+S
Subjt:  VFLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCTCAAAGTGCAGTTACCATGGAATGTCATAATTCCTGCTGAAAACTTAGATGCAAAGGGCTTGATGCTCCAGAGGTCTATTATAATCCGTCTACTAGATGAGTT
TGCCACCAAAAAGGCCACCAAGGATCTCGGCTATTTCCTCGCAGTTACAACTCTAGAAAATATAGGAGAAGGGAAAGTTCGTCAAACAGGCGATGTCTTGTTTCCAGTTA
TTTTTAGTGGTATCACCTTCAAACTTTATAGGGGAGAGATCTTGGAAGGGGTTGTTCACAAGGTTCTCAAGCATGGTGTTTTCTTGAGATGTGGCCCCGTCGAGAACATT
TATCTCTCTTACCTAAAAATGCCAGACTACCGCTATGTGCCGGGGGAGAATCCCGTCTTCCTGAACGACAAGCTGTCAAAGATTGAGAAAGATGTAGTTGTGCGTTTTAT
TGTGATTGGAACGAAGTGGCTTGAGGCTGAAAGAGAGTTTCAAGCACTTGTAAGTTTGGAAGGTGATTATCTAGGGCCTGTTTCTTAG
mRNA sequenceShow/hide mRNA sequence
GGAAAGGGCAAGCTGCTGCTTCATCTTCTTCTTCTTCTTCAGATTTCTGACAGGTTGAACGTTGAAGCAAGTAGGAAAATGTTTCTCAAAGTGCAGTTACCATGGAATGT
CATAATTCCTGCTGAAAACTTAGATGCAAAGGGCTTGATGCTCCAGAGGTCTATTATAATCCGTCTACTAGATGAGTTTGCCACCAAAAAGGCCACCAAGGATCTCGGCT
ATTTCCTCGCAGTTACAACTCTAGAAAATATAGGAGAAGGGAAAGTTCGTCAAACAGGCGATGTCTTGTTTCCAGTTATTTTTAGTGGTATCACCTTCAAACTTTATAGG
GGAGAGATCTTGGAAGGGGTTGTTCACAAGGTTCTCAAGCATGGTGTTTTCTTGAGATGTGGCCCCGTCGAGAACATTTATCTCTCTTACCTAAAAATGCCAGACTACCG
CTATGTGCCGGGGGAGAATCCCGTCTTCCTGAACGACAAGCTGTCAAAGATTGAGAAAGATGTAGTTGTGCGTTTTATTGTGATTGGAACGAAGTGGCTTGAGGCTGAAA
GAGAGTTTCAAGCACTTGTAAGTTTGGAAGGTGATTATCTAGGGCCTGTTTCTTAGTAAATTTTTTGGCACTGCAAGTATGTACTCTGTATATATAAACCCAAATCAAGT
TGTCTTCAGGATGGAACAATGTCTAGGTGACGTTATCAATTGAAGCTAAATACTTGTAGGAAGTTTCTTGGACAATGAACAGTAGGCCTGTAATGCAATTATGCCATCCT
GTTATTTTCTTCATCTTTATTAAGCTTTAAGACTTGATTGTTTTGACGGATATTGAATCTTATGTATCATGCATATAGATATATAATATCTTGGATATTTAATTTCCAAA
Protein sequenceShow/hide protein sequence
MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHGVFLRCGPVENI
YLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS