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PI0028061 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028061
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr05:17245813..17246007
RNA-Seq ExpressionPI0028061
SyntenyPI0028061
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047845.1 hypothetical protein E6C27_scaffold133G001090 [Cucumis melo var. makuwa]1.9e-0756.36Show/hide
Query:  MENNNNRNVPPQQAAQEQNAAYMAHDLERPIRSYAAPNLYNFNPRIANSMFGENT
        +EN NN+ V   Q AQEQN  Y+AH +++PIRSYA+ NLY+FNP I    FGEN+
Subjt:  MENNNNRNVPPQQAAQEQNAAYMAHDLERPIRSYAAPNLYNFNPRIANSMFGENT

KAA0051815.1 hypothetical protein E6C27_scaffold60G002300 [Cucumis melo var. makuwa]2.6e-1265Show/hide
Query:  NNRNVPPQQAAQEQNAAYMAHDLERPIRSYAAPNLYNFNPRIANSMFGENTRFEIKPVML
        NN+N P  Q  QEQN AY+AHDL++PI+SYA+PNLY+FNP IA   FGEN  FEIK +ML
Subjt:  NNRNVPPQQAAQEQNAAYMAHDLERPIRSYAAPNLYNFNPRIANSMFGENTRFEIKPVML

KAA0060833.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]2.1e-0956.45Show/hide
Query:  NNNNRNVPPQQAAQEQNAAYMAHDLERPIRSYAAPNLYNFNPRIANSMFGENTRFEIKPVML
        + NN+  P  QA Q  N  Y+AH+ +RPIRS  +PNLY FNP I    FGEN RF+IKPVML
Subjt:  NNNNRNVPPQQAAQEQNAAYMAHDLERPIRSYAAPNLYNFNPRIANSMFGENTRFEIKPVML

KAA0062403.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]1.5e-1264.06Show/hide
Query:  MENNNNRNVPPQQAAQEQNAAYMAHDLERPIRSYAAPNLYNFNPRIANSMFGENTRFEIKPVML
        M N NN+ +P  QAAQ  N  Y+A D +RPIRSYA+PNLY+FNP IA   F ENTRFEIK VML
Subjt:  MENNNNRNVPPQQAAQEQNAAYMAHDLERPIRSYAAPNLYNFNPRIANSMFGENTRFEIKPVML

TYK08803.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]2.1e-0956.45Show/hide
Query:  NNNNRNVPPQQAAQEQNAAYMAHDLERPIRSYAAPNLYNFNPRIANSMFGENTRFEIKPVML
        + NN+  P  QA Q  N  Y+AH+ +RPIRS  +PNLY FNP I    FGEN RF+IKPVML
Subjt:  NNNNRNVPPQQAAQEQNAAYMAHDLERPIRSYAAPNLYNFNPRIANSMFGENTRFEIKPVML

TrEMBL top hitse value%identityAlignment
A0A5A7U2F0 Uncharacterized protein9.4e-0856.36Show/hide
Query:  MENNNNRNVPPQQAAQEQNAAYMAHDLERPIRSYAAPNLYNFNPRIANSMFGENT
        +EN NN+ V   Q AQEQN  Y+AH +++PIRSYA+ NLY+FNP I    FGEN+
Subjt:  MENNNNRNVPPQQAAQEQNAAYMAHDLERPIRSYAAPNLYNFNPRIANSMFGENT

A0A5A7UDN8 Uncharacterized protein1.3e-1265Show/hide
Query:  NNRNVPPQQAAQEQNAAYMAHDLERPIRSYAAPNLYNFNPRIANSMFGENTRFEIKPVML
        NN+N P  Q  QEQN AY+AHDL++PI+SYA+PNLY+FNP IA   FGEN  FEIK +ML
Subjt:  NNRNVPPQQAAQEQNAAYMAHDLERPIRSYAAPNLYNFNPRIANSMFGENTRFEIKPVML

A0A5A7UXZ2 Retrovirus-related Pol polyprotein from transposon 17.61.0e-0956.45Show/hide
Query:  NNNNRNVPPQQAAQEQNAAYMAHDLERPIRSYAAPNLYNFNPRIANSMFGENTRFEIKPVML
        + NN+  P  QA Q  N  Y+AH+ +RPIRS  +PNLY FNP I    FGEN RF+IKPVML
Subjt:  NNNNRNVPPQQAAQEQNAAYMAHDLERPIRSYAAPNLYNFNPRIANSMFGENTRFEIKPVML

A0A5A7V2U7 Putative disease resistance RPP13-like protein 17.5e-1364.06Show/hide
Query:  MENNNNRNVPPQQAAQEQNAAYMAHDLERPIRSYAAPNLYNFNPRIANSMFGENTRFEIKPVML
        M N NN+ +P  QAAQ  N  Y+A D +RPIRSYA+PNLY+FNP IA   F ENTRFEIK VML
Subjt:  MENNNNRNVPPQQAAQEQNAAYMAHDLERPIRSYAAPNLYNFNPRIANSMFGENTRFEIKPVML

A0A5D3CAB5 Retrovirus-related Pol polyprotein from transposon 17.61.0e-0956.45Show/hide
Query:  NNNNRNVPPQQAAQEQNAAYMAHDLERPIRSYAAPNLYNFNPRIANSMFGENTRFEIKPVML
        + NN+  P  QA Q  N  Y+AH+ +RPIRS  +PNLY FNP I    FGEN RF+IKPVML
Subjt:  NNNNRNVPPQQAAQEQNAAYMAHDLERPIRSYAAPNLYNFNPRIANSMFGENTRFEIKPVML

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACAACAATAACAGAAATGTGCCACCTCAGCAAGCTGCCCAAGAACAGAACGCTGCCTACATGGCGCATGACTTAGAGAGACCAATTAGGTCTTATGCCGCGCC
CAACCTTTATAACTTCAACCCAAGAATCGCTAACTCTATGTTCGGTGAGAACACAAGATTCGAGATCAAACCTGTCATGCTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAACAACAATAACAGAAATGTGCCACCTCAGCAAGCTGCCCAAGAACAGAACGCTGCCTACATGGCGCATGACTTAGAGAGACCAATTAGGTCTTATGCCGCGCC
CAACCTTTATAACTTCAACCCAAGAATCGCTAACTCTATGTTCGGTGAGAACACAAGATTCGAGATCAAACCTGTCATGCTATAG
Protein sequenceShow/hide protein sequence
MENNNNRNVPPQQAAQEQNAAYMAHDLERPIRSYAAPNLYNFNPRIANSMFGENTRFEIKPVML