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PI0028118 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028118
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRING-H2 finger protein ATL14-like
Genome locationchr12:23601470..23601969
RNA-Seq ExpressionPI0028118
SyntenyPI0028118
Gene Ontology termsGO:0044238 - primary metabolic process (biological process)
GO:0044260 - cellular macromolecule metabolic process (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583431.1 RING-H2 finger protein ATL5, partial [Cucurbita argyrosperma subsp. sororia]5.6e-1640.28Show/hide
Query:  GLMLVAAICGLMILFMFIFHYY------YHQRLLLVH----------------LNTESSKVSGTAGVETSEEIPAAV--KMGFREIKTGEIGDCDGRKCA
        G+++++AI  ++ L +F+F  Y      Y  R L V                 +  + S V+      T+EE  A++  K+ +++IKT E  D D   CA
Subjt:  GLMLVAAICGLMILFMFIFHYY------YHQRLLLVH----------------LNTESSKVSGTAGVETSEEIPAAV--KMGFREIKTGEIGDCDGRKCA

Query:  ICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCRCFV
        ICIEGF EEEICGV++ CGH FH  CI++WL IE RCPLCRC V
Subjt:  ICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCRCFV

XP_022158249.1 E3 ubiquitin-protein ligase RING1-like [Momordica charantia]4.3e-1638.01Show/hide
Query:  MSSPSPPPVPESTTRPPIHHTFHLTTRLTI--ASGLMLVAAICGLMILFMFIFHYYYHQRLLL--------VHLNTESSKVSGTAGVETSEEIPAAVKMG
        MS P  PP P  + +  +  T  +T R T     G   V  IC  +I+  FI  Y YH+R++L        +    + S+V      E + + P+     
Subjt:  MSSPSPPPVPESTTRPPIHHTFHLTTRLTI--ASGLMLVAAICGLMILFMFIFHYYYHQRLLL--------VHLNTESSKVSGTAGVETSEEIPAAVKMG

Query:  FRE--------IKTGEIGDCDGRKCAICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCRCFVV
          E        I+  EI D D R CAIC EGF E+++C VIE CGHFFH DC+++WL +ER CPLCRCFV+
Subjt:  FRE--------IKTGEIGDCDGRKCAICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCRCFVV

XP_022158253.1 RING-H2 finger protein ATL14-like [Momordica charantia]2.5e-3256.95Show/hide
Query:  SPSPPPVPESTTRPPIHHTFHLTTRLTIASGLMLVAAICGLMILFMFIFHYYYHQRLLLVHLNTESSKVSGTAGVETSEEIPAAVKMGFREIKTGEIGDC
        SPSPPP    TT     +TFHLT RL +ASG M VA +C   I  MF+FHYY  +    VH +TES      +  +T+E+IPA+  + +RE    EI DC
Subjt:  SPSPPPVPESTTRPPIHHTFHLTTRLTIASGLMLVAAICGLMILFMFIFHYYYHQRLLLVHLNTESSKVSGTAGVETSEEIPAAVKMGFREIKTGEIGDC

Query:  DGRKCAICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCRCFVV
         GR CAICIEGF EEE CGVIENCGHFFH DCI+RWL+IE RCPLCRC +V
Subjt:  DGRKCAICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCRCFVV

XP_022964751.1 RING-H2 finger protein ATL64-like [Cucurbita moschata]1.5e-1659.21Show/hide
Query:  TSEEIPAAV--KMGFREIKTGEIGDCDGRKCAICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCRCFV
        T+EE  A++  K+ +R+IKT E  D D   CAICIEGF EEEICGV++ CGH FH  CI++WLRI  RCPLCRC +
Subjt:  TSEEIPAAV--KMGFREIKTGEIGDCDGRKCAICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCRCFV

XP_031742489.1 RING-H2 finger protein ATL1-like [Cucumis sativus]3.2e-7286.96Show/hide
Query:  MSSPSPPPVPESTTRPPI------HHTFHLTTRLTIASGLMLVAAICGLMILFMFIFHYYYHQRLLLVHLNTESSKVSGTAGVETSEEIPAAVKMGFREI
        MSSPSPPPVPESTTRPPI      H  FHLTTRLTIASGLMLVA IC LMILFMFIFHY YHQRLL+VH + ESS+VSGTA  ETSEEIPA+VKMGFREI
Subjt:  MSSPSPPPVPESTTRPPI------HHTFHLTTRLTIASGLMLVAAICGLMILFMFIFHYYYHQRLLLVHLNTESSKVSGTAGVETSEEIPAAVKMGFREI

Query:  KTGEIGDCDGRKCAICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCRCFVVCS
        KTGEIGDCDGRKCAICIEGFGEEEICGVIENCGHFFH DCINRWLRIERRCPLCRCFV CS
Subjt:  KTGEIGDCDGRKCAICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCRCFVVCS

TrEMBL top hitse value%identityAlignment
A0A5A7VMH1 RING-H2 finger protein ATL52-like1.7e-1540.69Show/hide
Query:  GLMLVAAICGLMILFMF-IFHYY----------YHQRL-------LLVHLNTE--SSKVSGTAGVETS--EEIPAAVKMGFREIKTGEIGD---CDGRKC
        G + V+ +C ++I+F+F I+HY             QRL       LL     E    + + T   +T+  EE  +AV     ++K  E G    C    C
Subjt:  GLMLVAAICGLMILFMF-IFHYY----------YHQRL-------LLVHLNTE--SSKVSGTAGVETS--EEIPAAVKMGFREIKTGEIGD---CDGRKC

Query:  AICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCRCFV
        AICIE F +EEICGV+E+CGH FH DC+++WLRIE RCPLCRC V
Subjt:  AICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCRCFV

A0A5D3BE50 RING-type E3 ubiquitin transferase1.3e-1538.26Show/hide
Query:  GLMLVAAICGLMILFMF-IFHY----------------YYHQRLLLV---------HLNTESSKVSGTAGVETSEEIPAAVKMGFREIKTGEIGD---CD
        G + V+ +C ++I+F+F I+HY                + H+ + L+            T +     T G ETS    A +K+ ++ +K  E G    C 
Subjt:  GLMLVAAICGLMILFMF-IFHY----------------YYHQRLLLV---------HLNTESSKVSGTAGVETSEEIPAAVKMGFREIKTGEIGD---CD

Query:  GRKCAICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCRCFV
           CAICIE F +EEICGV+E+CGH FH DC+++WLRIE RCPLCRC V
Subjt:  GRKCAICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCRCFV

A0A6J1DVK4 RING-H2 finger protein ATL14-like1.2e-3256.95Show/hide
Query:  SPSPPPVPESTTRPPIHHTFHLTTRLTIASGLMLVAAICGLMILFMFIFHYYYHQRLLLVHLNTESSKVSGTAGVETSEEIPAAVKMGFREIKTGEIGDC
        SPSPPP    TT     +TFHLT RL +ASG M VA +C   I  MF+FHYY  +    VH +TES      +  +T+E+IPA+  + +RE    EI DC
Subjt:  SPSPPPVPESTTRPPIHHTFHLTTRLTIASGLMLVAAICGLMILFMFIFHYYYHQRLLLVHLNTESSKVSGTAGVETSEEIPAAVKMGFREIKTGEIGDC

Query:  DGRKCAICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCRCFVV
         GR CAICIEGF EEE CGVIENCGHFFH DCI+RWL+IE RCPLCRC +V
Subjt:  DGRKCAICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCRCFVV

A0A6J1DYV0 E3 ubiquitin-protein ligase RING1-like2.1e-1638.01Show/hide
Query:  MSSPSPPPVPESTTRPPIHHTFHLTTRLTI--ASGLMLVAAICGLMILFMFIFHYYYHQRLLL--------VHLNTESSKVSGTAGVETSEEIPAAVKMG
        MS P  PP P  + +  +  T  +T R T     G   V  IC  +I+  FI  Y YH+R++L        +    + S+V      E + + P+     
Subjt:  MSSPSPPPVPESTTRPPIHHTFHLTTRLTI--ASGLMLVAAICGLMILFMFIFHYYYHQRLLL--------VHLNTESSKVSGTAGVETSEEIPAAVKMG

Query:  FRE--------IKTGEIGDCDGRKCAICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCRCFVV
          E        I+  EI D D R CAIC EGF E+++C VIE CGHFFH DC+++WL +ER CPLCRCFV+
Subjt:  FRE--------IKTGEIGDCDGRKCAICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCRCFVV

A0A6J1HJU0 RING-type E3 ubiquitin transferase7.1e-1759.21Show/hide
Query:  TSEEIPAAV--KMGFREIKTGEIGDCDGRKCAICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCRCFV
        T+EE  A++  K+ +R+IKT E  D D   CAICIEGF EEEICGV++ CGH FH  CI++WLRI  RCPLCRC +
Subjt:  TSEEIPAAV--KMGFREIKTGEIGDCDGRKCAICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCRCFV

SwissProt top hitse value%identityAlignment
P0C041 Putative RING-H2 finger protein ATL534.0e-0936.14Show/hide
Query:  SGTAGVETSEEIPAAVKMGFREIKTGEIG-DCDGRKCAICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCRCFVV
        S TAG++ +       K+GF ++K  + G   +G  C+IC+  F E+E   ++  C H FH  CI+RWL+    CPLCR  ++
Subjt:  SGTAGVETSEEIPAAVKMGFREIKTGEIG-DCDGRKCAICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCRCFVV

P93823 RING-H2 finger protein ATL12.2e-0727.17Show/hide
Query:  PSPPPVPESTTRPPIHHTFHLTTRLTIASGLMLVAAICGLMILFMFIFHYYY---------------------HQRLLLVHLNTESSKVSGTAGVETSEE
        P PPP P +T   PI   F  T+       ++ +A I  L   F+ + +Y +                      Q  L+++   E ++    + +     
Subjt:  PSPPPVPESTTRPPIHHTFHLTTRLTIASGLMLVAAICGLMILFMFIFHYYY---------------------HQRLLLVHLNTESSKVSGTAGVETSEE

Query:  IPAAVKMGFREIKTGEIGDC-DGRKCAICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCRCFVVC
        IP   K   R++  GE     + ++C++C+  F E+E   +I NC H FH DCI+ WL+    CPLCR  V C
Subjt:  IPAAVKMGFREIKTGEIGDC-DGRKCAICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCRCFVVC

Q6NKR1 RING-H2 finger protein ATL285.8e-0844.68Show/hide
Query:  GRKCAICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCRC
        G +CAIC+  F +E+   +I  C H FHS+CI+ W  + + CP+CRC
Subjt:  GRKCAICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCRC

Q8AWW4 E3 ubiquitin-protein ligase RNF1284.0e-0937.66Show/hide
Query:  SEEIPAAVKMGFREIKTGE-IGDCDGRKCAICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCRCFVVCS
        +E   A  K+  R IK G+ +   DG  CA+CIE +   ++  ++  C HFFH +CI+ WL   R CP+C+C ++ S
Subjt:  SEEIPAAVKMGFREIKTGE-IGDCDGRKCAICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCRCFVVCS

Q9LSW9 RING-H2 finger protein ATL162.0e-0846Show/hide
Query:  RKCAICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCRCFVVC
        ++C++C+  F +EE   +I NC H FH DCI+ WL+    CPLCR  V C
Subjt:  RKCAICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCRCFVVC

Arabidopsis top hitse value%identityAlignment
AT2G37150.1 RING/U-box superfamily protein6.3e-1046.67Show/hide
Query:  RKCAICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCR
        RKCAIC+E + E+E  G ++ CGH +H  CI +WL ++  CP+C+
Subjt:  RKCAICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCR

AT2G37150.2 RING/U-box superfamily protein6.3e-1046.67Show/hide
Query:  RKCAICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCR
        RKCAIC+E + E+E  G ++ CGH +H  CI +WL ++  CP+C+
Subjt:  RKCAICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCR

AT2G37150.3 RING/U-box superfamily protein6.3e-1046.67Show/hide
Query:  RKCAICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCR
        RKCAIC+E + E+E  G ++ CGH +H  CI +WL ++  CP+C+
Subjt:  RKCAICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCR

AT4G17905.1 RING/U-box superfamily protein2.8e-1036.14Show/hide
Query:  SGTAGVETSEEIPAAVKMGFREIKTGEIG-DCDGRKCAICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCRCFVV
        S TAG++ +       K+GF ++K  + G   +G  C+IC+  F E+E   ++  C H FH  CI+RWL+    CPLCR  ++
Subjt:  SGTAGVETSEEIPAAVKMGFREIKTGEIG-DCDGRKCAICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCRCFVV

AT5G43420.1 RING/U-box superfamily protein1.4e-0946Show/hide
Query:  RKCAICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCRCFVVC
        ++C++C+  F +EE   +I NC H FH DCI+ WL+    CPLCR  V C
Subjt:  RKCAICIEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCRCFVVC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCCCCATCTCCTCCGCCGGTACCGGAATCCACAACACGGCCACCGATCCACCACACGTTTCACCTAACGACCAGATTAACAATCGCAAGCGGGTTGATGTTGGT
GGCAGCGATTTGTGGTCTAATGATTTTGTTCATGTTCATATTTCATTATTATTACCATCAACGACTCCTTCTAGTCCACCTCAATACAGAATCAAGCAAAGTATCGGGAA
CTGCGGGGGTGGAGACGTCGGAGGAAATTCCGGCCGCCGTGAAGATGGGTTTTAGAGAAATCAAAACAGGGGAAATTGGGGATTGTGATGGGAGGAAGTGTGCGATATGT
ATTGAGGGATTTGGGGAAGAGGAGATTTGTGGAGTAATTGAGAATTGTGGCCACTTTTTTCATAGCGATTGTATTAATCGGTGGCTTAGAATTGAGAGGCGTTGCCCTCT
TTGCCGATGCTTTGTTGTTTGTTCATAG
mRNA sequenceShow/hide mRNA sequence
AAACCAATCAAACCTTCTTCTTCAATTCAGCCATGTCTTCCCCATCTCCTCCGCCGGTACCGGAATCCACAACACGGCCACCGATCCACCACACGTTTCACCTAACGACC
AGATTAACAATCGCAAGCGGGTTGATGTTGGTGGCAGCGATTTGTGGTCTAATGATTTTGTTCATGTTCATATTTCATTATTATTACCATCAACGACTCCTTCTAGTCCA
CCTCAATACAGAATCAAGCAAAGTATCGGGAACTGCGGGGGTGGAGACGTCGGAGGAAATTCCGGCCGCCGTGAAGATGGGTTTTAGAGAAATCAAAACAGGGGAAATTG
GGGATTGTGATGGGAGGAAGTGTGCGATATGTATTGAGGGATTTGGGGAAGAGGAGATTTGTGGAGTAATTGAGAATTGTGGCCACTTTTTTCATAGCGATTGTATTAAT
CGGTGGCTTAGAATTGAGAGGCGTTGCCCTCTTTGCCGATGCTTTGTTGTTTGTTCATAG
Protein sequenceShow/hide protein sequence
MSSPSPPPVPESTTRPPIHHTFHLTTRLTIASGLMLVAAICGLMILFMFIFHYYYHQRLLLVHLNTESSKVSGTAGVETSEEIPAAVKMGFREIKTGEIGDCDGRKCAIC
IEGFGEEEICGVIENCGHFFHSDCINRWLRIERRCPLCRCFVVCS