; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0028138 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028138
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDNA-directed RNA polymerases I and III subunit RPAC1
Genome locationchr06:27088551..27097788
RNA-Seq ExpressionPI0028138
SyntenyPI0028138
Gene Ontology termsGO:0006360 - transcription by RNA polymerase I (biological process)
GO:0006383 - transcription by RNA polymerase III (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0005736 - RNA polymerase I complex (cellular component)
GO:0001054 - RNA polymerase I activity (molecular function)
GO:0001056 - RNA polymerase III activity (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR001514 - DNA-directed RNA polymerase, 30-40kDa subunit, conserved site
IPR011262 - DNA-directed RNA polymerase, insert domain
IPR011263 - DNA-directed RNA polymerase, RpoA/D/Rpb3-type
IPR033901 - DNA-directed RNA polymerases I and III subunit AC40
IPR036603 - RNA polymerase, RBP11-like subunit
IPR036643 - DNA-directed RNA polymerase, insert domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596753.1 DNA-directed RNA polymerases I and III subunit RPAC1, partial [Cucurbita argyrosperma subsp. sororia]5.0e-20792.33Show/hide
Query:  MSGKDKNLHNMSESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDNFRNNFKIEVIELEGDDLE
        MSGKDKNLHNMSES+SEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD+FR NFKIEVI+L+ DD+E
Subjt:  MSGKDKNLHNMSESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDNFRNNFKIEVIELEGDDLE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSEALEWLP
        FDMIGIDP+LANAFRRILIAEVPTMAIEKVL ANNTSIVQDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVFRLH RCERGKPRLT TS+AL WLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSEALEWLP

Query:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDKLPEFSKNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSVSN+KPKTYTSFSCSQD LPEF+ NPIGPKD DIILARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLE+IEDELAE
Subjt:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDKLPEFSKNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKKKCPVNVFDIEDIA-GKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFRIESTGALPPEVLFTEAVKILEDKCERLIAELS
        ELK KCPVNVFDIEDIA GKKRATVARPRACTLCRECIRG+AWEKRV+LRRVKDHFIF+IESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  ELKKKCPVNVFDIEDIA-GKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFRIESTGALPPEVLFTEAVKILEDKCERLIAELS

XP_004148257.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucumis sativus]5.9e-20893.61Show/hide
Query:  MSGKDKNLHNMSESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDNFRNNFKIEVIELEGDDLE
        MSGKDKNLHNMSESESEQE V KEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMG DNSLRLDNFRNNFKIEVI+L+ DD+E
Subjt:  MSGKDKNLHNMSESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDNFRNNFKIEVIELEGDDLE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSEALEWLP
        FDMIGIDPALANAFRRILI+EVPTMAIEKVLFANNTSIVQDEVLAHRLGL+PI VDPRLF+YSDKD PNE NTIVFRLHA CERGKPRLTVTS+AL WLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSEALEWLP

Query:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDKL-PEFSKNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELA
        NGSEFPLVSDKSVSNSKPKTYTSFSCSQ+ L  EFS NPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVL+EEIEDELA
Subjt:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDKL-PEFSKNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELA

Query:  EELKKKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFRIESTGALPPEVLFTEAVKILEDKCERLIAELS
        EEL+KKCPVNVFDIEDIAGKKRATVARPR CTLCRECIRGDAWEKRVALRRVKDHFIF+IESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  EELKKKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFRIESTGALPPEVLFTEAVKILEDKCERLIAELS

XP_008449040.1 PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1 [Cucumis melo]1.7e-21094.37Show/hide
Query:  MSGKDKNLH-NMSESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDNFRNNFKIEVIELEGDDL
        MSGKDKNLH  M+ESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECK DAPIHTDTIQYSGAFASMG DNSLRLDNFRNNFKIEVI L+GDD+
Subjt:  MSGKDKNLH-NMSESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDNFRNNFKIEVIELEGDDL

Query:  EFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSEALEWL
        EFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPI VDPRLF+YSDKD PNE NTIVFRLHARCERGKPRLTV SEAL WL
Subjt:  EFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSEALEWL

Query:  PNGSEFPLVSDKSVSNSKPKTYTSFSCSQDKLPEFSKNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELA
        PNGSEFPLVSDKS+ NSKP+TYTSFSCSQDKLPEFSKN IGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV+LLEEIEDELA
Subjt:  PNGSEFPLVSDKSVSNSKPKTYTSFSCSQDKLPEFSKNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELA

Query:  EELKKKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFRIESTGALPPEVLFTEAVKILEDKCERLIAELS
        EELK+KCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIF+IESTGALPP VLFTEAVKILEDKCERLIAELS
Subjt:  EELKKKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFRIESTGALPPEVLFTEAVKILEDKCERLIAELS

XP_023005438.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita maxima]3.8e-20792.58Show/hide
Query:  MSGKDKNLHNMSESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDNFRNNFKIEVIELEGDDLE
        MSG+DKNLH+MSES+SEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD+FR NFKIEVI+L+ DD+E
Subjt:  MSGKDKNLHNMSESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDNFRNNFKIEVIELEGDDLE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSEALEWLP
        FDMIGIDP+LANAFRRILIAEVPTMAIEKVL ANNTSIVQDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVFRLH RCERGKPRLT TSEAL WLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSEALEWLP

Query:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDKLPEFSKNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSVSNSKPKTYTSFSCSQD LPEF+ NPIGPKD DIILARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
Subjt:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDKLPEFSKNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKKKCPVNVFDIEDIA-GKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFRIESTGALPPEVLFTEAVKILEDKCERLIAELS
        ELK KCPVNVFDIEDIA GKKRATVARPRACTLCRECIRG+AWEKRV+LRRVKDHFIF+IESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  ELKKKCPVNVFDIEDIA-GKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFRIESTGALPPEVLFTEAVKILEDKCERLIAELS

XP_038903474.1 DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1 [Benincasa hispida]5.7e-21194.62Show/hide
Query:  MSGKDKNLHNMSESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDNFRNNFKIEVIELEGDDLE
        MSGKDK+LHNMS+SESEQE V KEGIEWIMNLPDVPMKLPPH+ELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLD FRNNFKIEVI+L+ DD+E
Subjt:  MSGKDKNLHNMSESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDNFRNNFKIEVIELEGDDLE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSEALEWLP
        FDMIGIDPALANAFRRILIAEVPTMAIEKVL ANNTSIVQDEVLAHRLGL+PIHVDPRLFEYSDKDTPNEKNTIVFRLHA CERGK RLTVTS+AL WLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSEALEWLP

Query:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDKLPEFSKNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSVSNSKPKTYTSFSCSQD LPEFS NPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEI+DELAE
Subjt:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDKLPEFSKNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKKKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFRIESTGALPPEVLFTEAVKILEDKCERLIAELS
        ELKKKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGD WEKRVALRRVKDHFIF+IESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  ELKKKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFRIESTGALPPEVLFTEAVKILEDKCERLIAELS

TrEMBL top hitse value%identityAlignment
A0A0A0L637 DNA-directed RNA polymerases I and III subunit RPAC12.9e-20893.61Show/hide
Query:  MSGKDKNLHNMSESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDNFRNNFKIEVIELEGDDLE
        MSGKDKNLHNMSESESEQE V KEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMG DNSLRLDNFRNNFKIEVI+L+ DD+E
Subjt:  MSGKDKNLHNMSESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDNFRNNFKIEVIELEGDDLE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSEALEWLP
        FDMIGIDPALANAFRRILI+EVPTMAIEKVLFANNTSIVQDEVLAHRLGL+PI VDPRLF+YSDKD PNE NTIVFRLHA CERGKPRLTVTS+AL WLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSEALEWLP

Query:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDKL-PEFSKNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELA
        NGSEFPLVSDKSVSNSKPKTYTSFSCSQ+ L  EFS NPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVL+EEIEDELA
Subjt:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDKL-PEFSKNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELA

Query:  EELKKKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFRIESTGALPPEVLFTEAVKILEDKCERLIAELS
        EEL+KKCPVNVFDIEDIAGKKRATVARPR CTLCRECIRGDAWEKRVALRRVKDHFIF+IESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  EELKKKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFRIESTGALPPEVLFTEAVKILEDKCERLIAELS

A0A1S4DX61 DNA-directed RNA polymerases I and III subunit RPAC18.1e-21194.37Show/hide
Query:  MSGKDKNLH-NMSESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDNFRNNFKIEVIELEGDDL
        MSGKDKNLH  M+ESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECK DAPIHTDTIQYSGAFASMG DNSLRLDNFRNNFKIEVI L+GDD+
Subjt:  MSGKDKNLH-NMSESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDNFRNNFKIEVIELEGDDL

Query:  EFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSEALEWL
        EFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPI VDPRLF+YSDKD PNE NTIVFRLHARCERGKPRLTV SEAL WL
Subjt:  EFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSEALEWL

Query:  PNGSEFPLVSDKSVSNSKPKTYTSFSCSQDKLPEFSKNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELA
        PNGSEFPLVSDKS+ NSKP+TYTSFSCSQDKLPEFSKN IGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV+LLEEIEDELA
Subjt:  PNGSEFPLVSDKSVSNSKPKTYTSFSCSQDKLPEFSKNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELA

Query:  EELKKKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFRIESTGALPPEVLFTEAVKILEDKCERLIAELS
        EELK+KCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIF+IESTGALPP VLFTEAVKILEDKCERLIAELS
Subjt:  EELKKKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFRIESTGALPPEVLFTEAVKILEDKCERLIAELS

A0A6J1DXI7 DNA-directed RNA polymerases I and III subunit RPAC14.6e-19891.34Show/hide
Query:  MSESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDNFRNNFKIEVIELEGDDLEFDMIGIDPAL
        MS+SESEQ   GKEGIEWIMNLPDVPMKLPPH+E+QRTRVECKADAPIHTDTIQYSGA+ASMGVDNSLRLD FRNNFKIEVI+L  DD+EFDMIGIDPAL
Subjt:  MSESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDNFRNNFKIEVIELEGDDLEFDMIGIDPAL

Query:  ANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSEALEWLPNGSEFPLVSD
        ANAFRRILIAEVPTMAIEKVL ANNTS++QDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTS+ L WLPNGSEFPLVSD
Subjt:  ANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSEALEWLPNGSEFPLVSD

Query:  KSVSNSKPKTYTSFSCSQDKLPEFSKNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNV
        KSV NSKPKTYTSFSCSQD LPEFS N IGPKD+DII+ARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWY+MLPEVVL EEIEDELAEELKKKCPV+V
Subjt:  KSVSNSKPKTYTSFSCSQDKLPEFSKNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNV

Query:  FDIEDIA-GKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFRIESTGALPPEVLFTEAVKILEDKCERLIAELS
        FDIEDIA GKKRA VARPR+CTLCRECIRG+AWEKRV+LRRVKDHFIF+IESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  FDIEDIA-GKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFRIESTGALPPEVLFTEAVKILEDKCERLIAELS

A0A6J1FDA3 DNA-directed RNA polymerases I and III subunit RPAC12.4e-20792.33Show/hide
Query:  MSGKDKNLHNMSESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDNFRNNFKIEVIELEGDDLE
        MSGKDKNLHNMSES+SEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD+FR NFKIEVI+L+ DD+E
Subjt:  MSGKDKNLHNMSESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDNFRNNFKIEVIELEGDDLE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSEALEWLP
        FDMIGIDP+LANAFRRILIAEVPTMAIEKVL ANNTSIVQDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVFRLH RCERGKPRLT TS+AL WLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSEALEWLP

Query:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDKLPEFSKNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSVSN+KPKTYTSFSCSQD LPEF+ NPIGPKD DIILARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLE+IEDELAE
Subjt:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDKLPEFSKNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKKKCPVNVFDIEDIA-GKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFRIESTGALPPEVLFTEAVKILEDKCERLIAELS
        ELK KCPVNVFDIEDIA GKKRATVARPRACTLCRECIRG+AWEKRV+LRRVKDHFIF+IESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  ELKKKCPVNVFDIEDIA-GKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFRIESTGALPPEVLFTEAVKILEDKCERLIAELS

A0A6J1L269 DNA-directed RNA polymerases I and III subunit RPAC11.9e-20792.58Show/hide
Query:  MSGKDKNLHNMSESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDNFRNNFKIEVIELEGDDLE
        MSG+DKNLH+MSES+SEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD+FR NFKIEVI+L+ DD+E
Subjt:  MSGKDKNLHNMSESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDNFRNNFKIEVIELEGDDLE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSEALEWLP
        FDMIGIDP+LANAFRRILIAEVPTMAIEKVL ANNTSIVQDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVFRLH RCERGKPRLT TSEAL WLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSEALEWLP

Query:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDKLPEFSKNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSVSNSKPKTYTSFSCSQD LPEF+ NPIGPKD DIILARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
Subjt:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDKLPEFSKNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKKKCPVNVFDIEDIA-GKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFRIESTGALPPEVLFTEAVKILEDKCERLIAELS
        ELK KCPVNVFDIEDIA GKKRATVARPRACTLCRECIRG+AWEKRV+LRRVKDHFIF+IESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  ELKKKCPVNVFDIEDIA-GKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFRIESTGALPPEVLFTEAVKILEDKCERLIAELS

SwissProt top hitse value%identityAlignment
O15160 DNA-directed RNA polymerases I and III subunit RPAC18.4e-8046.99Show/hide
Query:  VELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDNFRNNFKIEVIELEGDDLEFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDE
        VE  R+RV        +  T  + G ++  G D++   D F  NF+++V+ ++ + LEFDM+GID A+ANAFRRIL+AEVPTMA+EKVL  NNTSIVQDE
Subjt:  VELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDNFRNNFKIEVIELEGDDLEFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDE

Query:  VLAHRLGLIPIHVDPRLFEYSDK--DTPNEKNTIVFRLHARCERGKPRLTVTSEALEWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDKLPEFSKNPIG
        +LAHRLGLIPIH DPRLFEY ++  +   E +T+ FRL  RC R       +S+  E   N   +          ++  T+       D  PE     I 
Subjt:  VLAHRLGLIPIHVDPRLFEYSDK--DTPNEKNTIVFRLHARCERGKPRLTVTSEALEWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDKLPEFSKNPIG

Query:  PKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGD
        P   DI++A+L PGQEI+L  H VKG+GK HAK+SPVATA YR+LP++ LLE +E E AEEL +     V +++++ GKK A VA PR  T  RE  R +
Subjt:  PKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGD

Query:  AWEKRVALRRVKDHFIFRIESTGALPPEVLFTEAVKILEDKCERLIAEL
          +K V L RV+DH+IF +ESTG LPP+VL +EA+K+L  KC R + EL
Subjt:  AWEKRVALRRVKDHFIFRIESTGALPPEVLFTEAVKILEDKCERLIAEL

O94616 DNA-directed RNA polymerases I and III subunit RPAC11.3e-6439.17Show/hide
Query:  VELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDNFRNNFKIEVIELEGDDLEFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDE
        V+  RT +   +D      ++ + G +     DN   LD F+ N K+ +  L+ + + F++ GID ++ANAFRRILIAE+PT+A E V   NNTSI+QDE
Subjt:  VELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDNFRNNFKIEVIELEGDDLEFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDE

Query:  VLAHRLGLIPIHVDPRLFEYSDKDTPNEK------NTIVFRLHARCERGK---------PRLTVTSEA----LEWLPNGSEFPLVSDKSVSNSKPKTYTS
        VL+HR+GL+PI  DP +F++     P ++      +T+VF L+ +CE  K          RL V SE     L W P G +                   
Subjt:  VLAHRLGLIPIHVDPRLFEYSDKDTPNEK------NTIVFRLHARCERGK---------PRLTVTSEA----LEWLPNGSEFPLVSDKSVSNSKPKTYTS

Query:  FSCSQDKLPEFSKNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIED-IAGKKRA
                  F+ NPI   + DI++A+L PGQEI+LEAHA+ G+G+ HAK+SPVATA YR+LP + +L  IE E A + +K  P  V ++E+   GKK+A
Subjt:  FSCSQDKLPEFSKNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIED-IAGKKRA

Query:  TVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFRIESTGALPPEVLFTEAVKILEDKC
         VA  R  T+ REC+R   +  +V L RV+DH++F +ESTG + P+VLF +++ +L+ KC
Subjt:  TVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFRIESTGALPPEVLFTEAVKILEDKC

P52432 DNA-directed RNA polymerases I and III subunit RPAC19.2e-7947.56Show/hide
Query:  VELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDNFRNNFKIEVIELEGDDLEFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDE
        VE  RTRV        +  T  + G +A  G D++   + F  NF+++V++++ D LEFDM+GID A+ANAFRRIL+AEVPTMA+EKVL  NNTSIVQDE
Subjt:  VELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDNFRNNFKIEVIELEGDDLEFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDE

Query:  VLAHRLGLIPIHVDPRLFEYSD--KDTPNEKNTIVFRLHARCERGKPRLTVTSEALEWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDKLPEFSKNPIG
        +LAHRLGLIPI  DPRLFEY +  ++   E +T+ FRL  RC R       +S+  E   N   +          ++  T+       D  PE     I 
Subjt:  VLAHRLGLIPIHVDPRLFEYSD--KDTPNEKNTIVFRLHARCERGKPRLTVTSEALEWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDKLPEFSKNPIG

Query:  PKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGD
        P   DI++A+L PGQEI+L  H VKG+GK HAK+SPVATA YR+LP + LLE +E E AEEL +     V ++E++ GKK A VA  R  T  RE  R +
Subjt:  PKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGD

Query:  AWEKRVALRRVKDHFIFRIESTGALPPEVLFTEAVKILEDKCERLIAEL
          +K V L RV+DH+IF +ESTG LPP+VL +EA+KIL  KC R + EL
Subjt:  AWEKRVALRRVKDHFIFRIESTGALPPEVLFTEAVKILEDKCERLIAEL

Q32L22 DNA-directed RNA polymerases I and III subunit RPAC17.6e-8147.85Show/hide
Query:  VELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDNFRNNFKIEVIELEGDDLEFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDE
        VE  RTRV        +  T  + G ++  G D++   D F  NF+++V+ ++ + LEFDM+GID A+ANAFRRIL+AEVPTMA+EKVL  NNTSIVQDE
Subjt:  VELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDNFRNNFKIEVIELEGDDLEFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDE

Query:  VLAHRLGLIPIHVDPRLFEYSDK--DTPNEKNTIVFRLHARCERGKPRLTVTSEALEWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDKLPEFSKNPIG
        +LAHRLGLIPIH DPRLFEY ++  +   E +T+ FRL  RC R       +S+  E   N   +          ++  T+       D  PE     I 
Subjt:  VLAHRLGLIPIHVDPRLFEYSDK--DTPNEKNTIVFRLHARCERGKPRLTVTSEALEWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDKLPEFSKNPIG

Query:  PKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGD
        P   DI++A+L PGQEI+L  H VKG+GK HAK+SPVATA YR+LP++ LLE +E E AEEL +     V ++++I GKK A VA PR  T  RE  R +
Subjt:  PKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGD

Query:  AWEKRVALRRVKDHFIFRIESTGALPPEVLFTEAVKILEDKCERLIAEL
          +K V L RV+DHFIF +ESTG LPP+VL +EA+K+L  KC+R + EL
Subjt:  AWEKRVALRRVKDHFIFRIESTGALPPEVLFTEAVKILEDKCERLIAEL

Q54SN4 DNA-directed RNA polymerases I and III subunit rpac15.4e-7142.45Show/hide
Query:  PHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDNFRNNFKIEVIELEGDDLEFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQ
        P++E +RT+V        +     YSGA+ S+G DNS  L+ F+ NFKI ++    ++L F+MIGID  +ANA RRI+I+E+PTMAIEKV   NNTSI+Q
Subjt:  PHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDNFRNNFKIEVIELEGDDLEFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQ

Query:  DEVLAHRLGLIPIHVDPRLFEYSDKDTPNE----KNTIVFRLHARCER----GK-PRLTVTSEALEWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDKL
        DEVLAHRLG+IPI VDPR F +     PN+    ++T++F+L  +CE+    GK    T  S+ L W+P   +                       ++  
Subjt:  DEVLAHRLGLIPIHVDPRLFEYSDKDTPNE----KNTIVFRLHARCER----GK-PRLTVTSEALEWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDKL

Query:  PEFSKNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIAGKKRATVARPRACT
        P     P  P + DI + +L PGQ I+++ +  K +G+ H KWSPV TA YR+ P + + + I+ + A +L +KCP  VFDIED     +   ARP  CT
Subjt:  PEFSKNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIAGKKRATVARPRACT

Query:  LCRECIRGDAWEKRVALRRVKDHFIFRIESTGALPPEVLFTEAVKILEDKC
        +CRECIR   +E+ V + RV+DHFIF IESTGAL    +F EA+KI  +KC
Subjt:  LCRECIRGDAWEKRVALRRVKDHFIFRIESTGALPPEVLFTEAVKILEDKC

Arabidopsis top hitse value%identityAlignment
AT1G60620.1 RNA polymerase I subunit 432.1e-14269.04Show/hide
Query:  IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDNFRNNFKIEVIELEGDDLEFDMIGIDPALANAFRRILIAEVPTMAIE
        I +LPDVP  LPPH+ELQRTRV CK D+ IH   I +SGA++SMGVDNS+RL+NF  +FK++VI L   D+ FDMIG+   +ANAFRRIL+AE+P+MAIE
Subjt:  IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDNFRNNFKIEVIELEGDDLEFDMIGIDPALANAFRRILIAEVPTMAIE

Query:  KVLFANNTSIVQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGKPRLTVTSEALEWLPNGSEFPLVSDKSVSNSKPKTYTSFSCS
        KV  ANNTS++QDEVLAHRLGLIPI  DPRLFEY S+ D PNEKNTIVF+LH +C +G PR  V +  L+WLPNGSE  L+ +   S + PKTYTSF+ S
Subjt:  KVLFANNTSIVQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGKPRLTVTSEALEWLPNGSEFPLVSDKSVSNSKPKTYTSFSCS

Query:  QDKLPEFSKNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIA-GKKRATVAR
        QD  PEF++NPI P   DI++A+LGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLL+E E + AEEL K CP  VFDIED+  G+KRATVAR
Subjt:  QDKLPEFSKNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIA-GKKRATVAR

Query:  PRACTLCRECIR-GDAWEKRVALRRVKDHFIFRIESTGALPPEVLFTEAVKILEDKCERLIAELS
        PR C+LCRECIR G  WE +V LRRVK+HFIF IESTG+ PPEVLF EAVKILEDKCER+I+ELS
Subjt:  PRACTLCRECIR-GDAWEKRVALRRVKDHFIFRIESTGALPPEVLFTEAVKILEDKCERLIAELS

AT1G60850.1 DNA-directed RNA polymerase family protein1.5e-13266.39Show/hide
Query:  IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDNFRNNFKIEVIELEGDDLEFDMIGIDPALANAFRRILIAEVPTMAI
        I +LPDVP  LPPH++ Q+TRV  K +AP HT +  YSG + +S   D++++L NF +NFK++V+ L   D+EFDMIGID A ANAFRRILIAEVP+MAI
Subjt:  IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDNFRNNFKIEVIELEGDDLEFDMIGIDPALANAFRRILIAEVPTMAI

Query:  EKVLFANNTSIVQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGKPRLTVTSEALEWLPNGSEFPLVSDKSVSNSKPKTYTSFSC
        EKVL A NTS++ DEVLAHR+GLIPI  DPRLFEY S+ D  NEKNTIVF+LH +C + +PRL V +  L+WLPNGSE  L+ +     SKPKTYTSFSC
Subjt:  EKVLFANNTSIVQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGKPRLTVTSEALEWLPNGSEFPLVSDKSVSNSKPKTYTSFSC

Query:  SQDKLPEFSKNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIA-GKKRATVA
        SQD LPEF+ NPI P D DI++A+L PGQEIELEAHAVKG+GKTHAKWSPV TAWYRM PEVVL  E+EDELAE L   CP NVFDIED+  GKKRATVA
Subjt:  SQDKLPEFSKNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIA-GKKRATVA

Query:  RPRACTLCRECIRGDAWEKRVALRRVKDHFIFRIESTGALPPEVLFTEAVKILEDKCERL
        +PR CTLC+EC+R D     V L  VK+HFIF IESTG+LPPEVLFTEAVKILE KCE +
Subjt:  RPRACTLCRECIRGDAWEKRVALRRVKDHFIFRIESTGALPPEVLFTEAVKILEDKCERL

AT1G60850.2 DNA-directed RNA polymerase family protein1.5e-13266.39Show/hide
Query:  IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDNFRNNFKIEVIELEGDDLEFDMIGIDPALANAFRRILIAEVPTMAI
        I +LPDVP  LPPH++ Q+TRV  K +AP HT +  YSG + +S   D++++L NF +NFK++V+ L   D+EFDMIGID A ANAFRRILIAEVP+MAI
Subjt:  IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDNFRNNFKIEVIELEGDDLEFDMIGIDPALANAFRRILIAEVPTMAI

Query:  EKVLFANNTSIVQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGKPRLTVTSEALEWLPNGSEFPLVSDKSVSNSKPKTYTSFSC
        EKVL A NTS++ DEVLAHR+GLIPI  DPRLFEY S+ D  NEKNTIVF+LH +C + +PRL V +  L+WLPNGSE  L+ +     SKPKTYTSFSC
Subjt:  EKVLFANNTSIVQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGKPRLTVTSEALEWLPNGSEFPLVSDKSVSNSKPKTYTSFSC

Query:  SQDKLPEFSKNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIA-GKKRATVA
        SQD LPEF+ NPI P D DI++A+L PGQEIELEAHAVKG+GKTHAKWSPV TAWYRM PEVVL  E+EDELAE L   CP NVFDIED+  GKKRATVA
Subjt:  SQDKLPEFSKNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIA-GKKRATVA

Query:  RPRACTLCRECIRGDAWEKRVALRRVKDHFIFRIESTGALPPEVLFTEAVKILEDKCERL
        +PR CTLC+EC+R D     V L  VK+HFIF IESTG+LPPEVLFTEAVKILE KCE +
Subjt:  RPRACTLCRECIRGDAWEKRVALRRVKDHFIFRIESTGALPPEVLFTEAVKILEDKCERL

AT1G60850.3 DNA-directed RNA polymerase family protein6.1e-9465.27Show/hide
Query:  IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDNFRNNFKIEVIELEGDDLEFDMIGIDPALANAFRRILIAEVPTMAI
        I +LPDVP  LPPH++ Q+TRV  K +AP HT +  YSG + +S   D++++L NF +NFK++V+ L   D+EFDMIGID A ANAFRRILIAEVP+MAI
Subjt:  IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDNFRNNFKIEVIELEGDDLEFDMIGIDPALANAFRRILIAEVPTMAI

Query:  EKVLFANNTSIVQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGKPRLTVTSEALEWLPNGSEFPLVSDKSVSNSKPKTYTSFSC
        EKVL A NTS++ DEVLAHR+GLIPI  DPRLFEY S+ D  NEKNTIVF+LH +C + +PRL V +  L+WLPNGSE  L+ +     SKPKTYTSFSC
Subjt:  EKVLFANNTSIVQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGKPRLTVTSEALEWLPNGSEFPLVSDKSVSNSKPKTYTSFSC

Query:  SQDKLPEFSKNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV
        SQD LPEF+ NPI P D DI++A+L PGQEIELEAHAVKG+GKTHAKWSPV TAWYRM PEV
Subjt:  SQDKLPEFSKNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV

AT2G15430.1 DNA-directed RNA polymerase family protein2.7e-3332.8Show/hide
Query:  KIEVIELEGDDLEFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIHVD-------PRLFEYSDKDTPNEKNTIVFRLHA
        KI++ EL+ D  +F++   D ++ANA RR++I+EVPT+AI+ V    N+S++ DE +AHRLGLIP+  +        R  +  D D   E  ++ FRL +
Subjt:  KIEVIELEGDDLEFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIHVD-------PRLFEYSDKDTPNEKNTIVFRLHA

Query:  RCERGKPRLTVTSEALEWL-PNGSEFPLVSDKSVSNSKPKTYTSFSCSQDKLPEFSKNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVAT
        +C   +  L VTS  L    P  +      D SVS+S                         +   II+ +L  GQE++L A A KG+GK HAKWSP AT
Subjt:  RCERGKPRLTVTSEALEWL-PNGSEFPLVSDKSVSNSKPKTYTSFSCSQDKLPEFSKNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVAT

Query:  AWYRMLPEVVLLEEIEDELAEELK----KKCPVNVFDIEDIAGKKRATVARPRACTLCRECI-RGDAWEK--RVALRRVKDHFIFRIESTGALPPEVLFT
          +   P++++ E++ D L++E K    +  P  VF ++ +   ++  V  P A T   E I + +A  K   + +    D FIF +ESTGA+    L  
Subjt:  AWYRMLPEVVLLEEIEDELAEELK----KKCPVNVFDIEDIAGKKRATVARPRACTLCRECI-RGDAWEK--RVALRRVKDHFIFRIESTGALPPEVLFT

Query:  EAVKILEDKCE
         A+ +L+ K +
Subjt:  EAVKILEDKCE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGGCAAAGATAAGAATTTGCATAATATGTCGGAGTCGGAATCCGAACAAGAAGATGTTGGCAAAGAAGGCATTGAGTGGATAATGAATCTTCCAGACGTGCCCAT
GAAGCTTCCTCCACACGTGGAATTGCAGAGAACTCGAGTCGAATGCAAAGCCGATGCTCCCATTCATACGGATACCATACAGTATTCTGGAGCATTTGCTTCCATGGGCG
TTGATAACAGTTTACGTCTGGATAATTTTCGCAACAACTTTAAAATTGAAGTTATTGAACTCGAAGGGGATGACCTTGAGTTTGACATGATTGGCATTGATCCAGCACTT
GCTAATGCATTTCGAAGAATCCTGATAGCCGAGGTTCCCACTATGGCTATTGAAAAAGTTCTTTTTGCAAACAATACATCAATAGTCCAAGATGAAGTGCTTGCCCATCG
GTTAGGTCTCATTCCGATACATGTTGATCCAAGGCTTTTCGAGTACTCAGATAAAGACACACCGAATGAGAAGAATACCATTGTTTTTAGACTCCATGCTCGCTGTGAAC
GAGGAAAACCACGTCTTACAGTGACATCAGAAGCATTGGAGTGGTTGCCAAATGGTAGTGAATTTCCCTTGGTGTCAGACAAATCAGTTTCAAACTCAAAACCCAAAACC
TATACTTCTTTTAGTTGCAGCCAAGACAAACTGCCAGAATTTTCCAAGAATCCAATTGGTCCAAAGGACAGTGATATTATACTTGCTAGACTTGGCCCGGGTCAGGAAAT
TGAACTTGAAGCTCATGCTGTTAAAGGTATGGGCAAAACGCACGCTAAGTGGTCCCCAGTGGCCACTGCTTGGTACAGGATGCTTCCTGAGGTTGTACTCCTGGAAGAAA
TAGAGGATGAGCTAGCTGAAGAACTAAAAAAGAAATGTCCTGTTAATGTATTTGACATTGAAGACATAGCTGGTAAGAAAAGGGCAACCGTAGCACGCCCACGAGCTTGC
ACATTGTGTAGAGAATGCATAAGAGGAGATGCATGGGAGAAACGTGTCGCATTGCGTCGTGTGAAAGATCATTTCATTTTTAGGATTGAATCAACAGGAGCTTTACCTCC
CGAGGTTCTCTTCACTGAAGCTGTAAAGATTTTGGAAGATAAGTGCGAACGTTTAATTGCCGAGCTGTCTTAA
mRNA sequenceShow/hide mRNA sequence
CTATTTCCCATAACTTAGTTCTTAAACCCTCCCCTCCCGTCTAAAACCTCCTCAGCCGTGCTGCTGAGTGCCGCCGCCGCCGCCGGACAGTTCTTACTTGTTTTGTTCTC
AGTTACAGCCGAGTCCACCGACTAAATAACTGTGCGCACACTGAATCGGAGGTTGACAATGTCCGGCAAAGATAAGAATTTGCATAATATGTCGGAGTCGGAATCCGAAC
AAGAAGATGTTGGCAAAGAAGGCATTGAGTGGATAATGAATCTTCCAGACGTGCCCATGAAGCTTCCTCCACACGTGGAATTGCAGAGAACTCGAGTCGAATGCAAAGCC
GATGCTCCCATTCATACGGATACCATACAGTATTCTGGAGCATTTGCTTCCATGGGCGTTGATAACAGTTTACGTCTGGATAATTTTCGCAACAACTTTAAAATTGAAGT
TATTGAACTCGAAGGGGATGACCTTGAGTTTGACATGATTGGCATTGATCCAGCACTTGCTAATGCATTTCGAAGAATCCTGATAGCCGAGGTTCCCACTATGGCTATTG
AAAAAGTTCTTTTTGCAAACAATACATCAATAGTCCAAGATGAAGTGCTTGCCCATCGGTTAGGTCTCATTCCGATACATGTTGATCCAAGGCTTTTCGAGTACTCAGAT
AAAGACACACCGAATGAGAAGAATACCATTGTTTTTAGACTCCATGCTCGCTGTGAACGAGGAAAACCACGTCTTACAGTGACATCAGAAGCATTGGAGTGGTTGCCAAA
TGGTAGTGAATTTCCCTTGGTGTCAGACAAATCAGTTTCAAACTCAAAACCCAAAACCTATACTTCTTTTAGTTGCAGCCAAGACAAACTGCCAGAATTTTCCAAGAATC
CAATTGGTCCAAAGGACAGTGATATTATACTTGCTAGACTTGGCCCGGGTCAGGAAATTGAACTTGAAGCTCATGCTGTTAAAGGTATGGGCAAAACGCACGCTAAGTGG
TCCCCAGTGGCCACTGCTTGGTACAGGATGCTTCCTGAGGTTGTACTCCTGGAAGAAATAGAGGATGAGCTAGCTGAAGAACTAAAAAAGAAATGTCCTGTTAATGTATT
TGACATTGAAGACATAGCTGGTAAGAAAAGGGCAACCGTAGCACGCCCACGAGCTTGCACATTGTGTAGAGAATGCATAAGAGGAGATGCATGGGAGAAACGTGTCGCAT
TGCGTCGTGTGAAAGATCATTTCATTTTTAGGATTGAATCAACAGGAGCTTTACCTCCCGAGGTTCTCTTCACTGAAGCTGTAAAGATTTTGGAAGATAAGTGCGAACGT
TTAATTGCCGAGCTGTCTTAATTCTTCTTAATCCAAAAGTCACAGACCTGTATATTATTTTATTATATTTATAGGTCACCAATTTTTGTAACATATGAATGGATTAGTAA
GTTTTTGTTTTGAACTGACAGTGGAATAGCTTCTTCACCAATGGATTACCAAAGGTATCTTGGACTATTCATATGTGTTTATTTTATAGAATTTGTAGATGACAATCTAT
TTTAATTGAAATTTTTTTAAAAAAAAACCTACCTGAATTAATTTAAGTACAGATATAGGAAGAGAAACTTAAGACTTGTCATTTGAACGTTTTTTGTTTTCTTTGGAGCT
AAATGGTGAAATTATACTTGGATGAATTGAAAGA
Protein sequenceShow/hide protein sequence
MSGKDKNLHNMSESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDNFRNNFKIEVIELEGDDLEFDMIGIDPAL
ANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSEALEWLPNGSEFPLVSDKSVSNSKPKT
YTSFSCSQDKLPEFSKNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIAGKKRATVARPRAC
TLCRECIRGDAWEKRVALRRVKDHFIFRIESTGALPPEVLFTEAVKILEDKCERLIAELS