; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0028150 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028150
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr01:11832978..11833379
RNA-Seq ExpressionPI0028150
SyntenyPI0028150
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032943.1 senescence-specific cysteine protease sag39 [Cucumis melo var. makuwa]5.6e-2553.6Show/hide
Query:  MLYLKEVPDNTGFLETRVQDISEKADCINAVADCLDELPIQELMTRV------VQIENSGNLEHGDSSTDSVAYMEQRVKKLDNSQKLLIRMTNDLFKDF
        MLYL EVPD+  +LE+R+ +ISEK + I+AVA  ++  PIQELMTRV      + I  + N E GDSSTDSVA++E+RV++LD+SQK L+ M N + +DF
Subjt:  MLYLKEVPDNTGFLETRVQDISEKADCINAVADCLDELPIQELMTRV------VQIENSGNLEHGDSSTDSVAYMEQRVKKLDNSQKLLIRMTNDLFKDF

Query:  QATLEVVRAEIVDVSVKVNRTMRVM
        +ATL+VVR EI DV+ +++ TMR M
Subjt:  QATLEVVRAEIVDVSVKVNRTMRVM

KAA0042379.1 reverse transcriptase [Cucumis melo var. makuwa]7.3e-2552.8Show/hide
Query:  MLYLKEVPDNTGFLETRVQDISEKADCINAVADCLDELPIQELMTRVVQIENSGNL------EHGDSSTDSVAYMEQRVKKLDNSQKLLIRMTNDLFKDF
        MLYL EVPD+  +LE+R+ +ISEK + I+AVA  ++  PIQELMTRVV +E + N+      E GDSST S+A++E+RV++LD+SQK L+ M N + +DF
Subjt:  MLYLKEVPDNTGFLETRVQDISEKADCINAVADCLDELPIQELMTRVVQIENSGNL------EHGDSSTDSVAYMEQRVKKLDNSQKLLIRMTNDLFKDF

Query:  QATLEVVRAEIVDVSVKVNRTMRVM
        +ATL+VVR EI DV+ +++ TMR M
Subjt:  QATLEVVRAEIVDVSVKVNRTMRVM

KAA0057286.1 uncharacterized protein E6C27_scaffold280G001270 [Cucumis melo var. makuwa]5.6e-2553.6Show/hide
Query:  MLYLKEVPDNTGFLETRVQDISEKADCINAVADCLDELPIQELMTRV------VQIENSGNLEHGDSSTDSVAYMEQRVKKLDNSQKLLIRMTNDLFKDF
        MLYL EVPD+  +LE+R+++ISEK + I+AVA  ++  PIQELMTRV      + I  + N E GDSSTDSVA++E+RV++LD+SQK L+ M N + +DF
Subjt:  MLYLKEVPDNTGFLETRVQDISEKADCINAVADCLDELPIQELMTRV------VQIENSGNLEHGDSSTDSVAYMEQRVKKLDNSQKLLIRMTNDLFKDF

Query:  QATLEVVRAEIVDVSVKVNRTMRVM
        +ATL+VVR EI DV+ +++ TMR M
Subjt:  QATLEVVRAEIVDVSVKVNRTMRVM

KAA0066437.1 uncharacterized protein E6C27_scaffold21G005300 [Cucumis melo var. makuwa]2.5e-2554.47Show/hide
Query:  MLYLKEVPDNTGFLETRVQDISEKADCINAVADCLDELPIQELMTRV----VQIENSGNLEHGDSSTDSVAYMEQRVKKLDNSQKLLIRMTNDLFKDFQA
        MLYL EVPD+  FLE+R+ +I+EK + I+AVA C++ LPIQEL+ RV      +E + N E+GDSS+  VA+ME+RV +LD+SQK L+ M ND+ +DF+A
Subjt:  MLYLKEVPDNTGFLETRVQDISEKADCINAVADCLDELPIQELMTRV----VQIENSGNLEHGDSSTDSVAYMEQRVKKLDNSQKLLIRMTNDLFKDFQA

Query:  TLEVVRAEIVDVSVKVNRTMRVM
        TL VVR EIVDV+ ++N TMR +
Subjt:  TLEVVRAEIVDVSVKVNRTMRVM

TYK02461.1 uncharacterized protein E5676_scaffold1738G00820 [Cucumis melo var. makuwa]3.0e-2650.36Show/hide
Query:  MLYLKEVPDNTGFLETRVQDISEKADCINAVADCLDELPIQELMTRV----VQIENSGNLEHGDSSTDSVAYMEQRVKKLDNSQKLLIRMTNDLFKDFQA
        MLYL EVPD+  +LE+R+ +ISEK D I+AVA C++ LPIQEL+ RV    V +  +GN E+ DSS+  VA+ME RV +LD+SQK L+ M ND+ +DF+A
Subjt:  MLYLKEVPDNTGFLETRVQDISEKADCINAVADCLDELPIQELMTRV----VQIENSGNLEHGDSSTDSVAYMEQRVKKLDNSQKLLIRMTNDLFKDFQA

Query:  TLEVVRAEIVDVSVKVNRTMRVMKIKPQLWGQFKSTR
        TL+V+R EIVD + ++N TMR M  +  + G    T+
Subjt:  TLEVVRAEIVDVSVKVNRTMRVMKIKPQLWGQFKSTR

TrEMBL top hitse value%identityAlignment
A0A5A7SR89 Senescence-specific cysteine protease sag392.7e-2553.6Show/hide
Query:  MLYLKEVPDNTGFLETRVQDISEKADCINAVADCLDELPIQELMTRV------VQIENSGNLEHGDSSTDSVAYMEQRVKKLDNSQKLLIRMTNDLFKDF
        MLYL EVPD+  +LE+R+ +ISEK + I+AVA  ++  PIQELMTRV      + I  + N E GDSSTDSVA++E+RV++LD+SQK L+ M N + +DF
Subjt:  MLYLKEVPDNTGFLETRVQDISEKADCINAVADCLDELPIQELMTRV------VQIENSGNLEHGDSSTDSVAYMEQRVKKLDNSQKLLIRMTNDLFKDF

Query:  QATLEVVRAEIVDVSVKVNRTMRVM
        +ATL+VVR EI DV+ +++ TMR M
Subjt:  QATLEVVRAEIVDVSVKVNRTMRVM

A0A5A7UT10 Retrotrans_gag domain-containing protein2.7e-2553.6Show/hide
Query:  MLYLKEVPDNTGFLETRVQDISEKADCINAVADCLDELPIQELMTRV------VQIENSGNLEHGDSSTDSVAYMEQRVKKLDNSQKLLIRMTNDLFKDF
        MLYL EVPD+  +LE+R+++ISEK + I+AVA  ++  PIQELMTRV      + I  + N E GDSSTDSVA++E+RV++LD+SQK L+ M N + +DF
Subjt:  MLYLKEVPDNTGFLETRVQDISEKADCINAVADCLDELPIQELMTRV------VQIENSGNLEHGDSSTDSVAYMEQRVKKLDNSQKLLIRMTNDLFKDF

Query:  QATLEVVRAEIVDVSVKVNRTMRVM
        +ATL+VVR EI DV+ +++ TMR M
Subjt:  QATLEVVRAEIVDVSVKVNRTMRVM

A0A5A7VH68 Uncharacterized protein1.2e-2554.47Show/hide
Query:  MLYLKEVPDNTGFLETRVQDISEKADCINAVADCLDELPIQELMTRV----VQIENSGNLEHGDSSTDSVAYMEQRVKKLDNSQKLLIRMTNDLFKDFQA
        MLYL EVPD+  FLE+R+ +I+EK + I+AVA C++ LPIQEL+ RV      +E + N E+GDSS+  VA+ME+RV +LD+SQK L+ M ND+ +DF+A
Subjt:  MLYLKEVPDNTGFLETRVQDISEKADCINAVADCLDELPIQELMTRV----VQIENSGNLEHGDSSTDSVAYMEQRVKKLDNSQKLLIRMTNDLFKDFQA

Query:  TLEVVRAEIVDVSVKVNRTMRVM
        TL VVR EIVDV+ ++N TMR +
Subjt:  TLEVVRAEIVDVSVKVNRTMRVM

A0A5D3BRU5 Uncharacterized protein1.4e-2650.36Show/hide
Query:  MLYLKEVPDNTGFLETRVQDISEKADCINAVADCLDELPIQELMTRV----VQIENSGNLEHGDSSTDSVAYMEQRVKKLDNSQKLLIRMTNDLFKDFQA
        MLYL EVPD+  +LE+R+ +ISEK D I+AVA C++ LPIQEL+ RV    V +  +GN E+ DSS+  VA+ME RV +LD+SQK L+ M ND+ +DF+A
Subjt:  MLYLKEVPDNTGFLETRVQDISEKADCINAVADCLDELPIQELMTRV----VQIENSGNLEHGDSSTDSVAYMEQRVKKLDNSQKLLIRMTNDLFKDFQA

Query:  TLEVVRAEIVDVSVKVNRTMRVMKIKPQLWGQFKSTR
        TL+V+R EIVD + ++N TMR M  +  + G    T+
Subjt:  TLEVVRAEIVDVSVKVNRTMRVMKIKPQLWGQFKSTR

A0A5D3CW71 Reverse transcriptase3.6e-2552.8Show/hide
Query:  MLYLKEVPDNTGFLETRVQDISEKADCINAVADCLDELPIQELMTRVVQIENSGNL------EHGDSSTDSVAYMEQRVKKLDNSQKLLIRMTNDLFKDF
        MLYL EVPD+  +LE+R+ +ISEK + I+AVA  ++  PIQELMTRVV +E + N+      E GDSST S+A++E+RV++LD+SQK L+ M N + +DF
Subjt:  MLYLKEVPDNTGFLETRVQDISEKADCINAVADCLDELPIQELMTRVVQIENSGNL------EHGDSSTDSVAYMEQRVKKLDNSQKLLIRMTNDLFKDF

Query:  QATLEVVRAEIVDVSVKVNRTMRVM
        +ATL+VVR EI DV+ +++ TMR M
Subjt:  QATLEVVRAEIVDVSVKVNRTMRVM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTACCTGAAGGAAGTCCCTGACAATACTGGCTTCTTGGAAACTCGGGTACAAGATATTTCAGAGAAAGCTGACTGTATCAATGCGGTAGCCGATTGCTTAGACGA
ATTACCCATACAAGAGTTGATGACGAGAGTTGTGCAAATCGAAAATTCTGGTAACCTCGAGCATGGAGACAGCTCGACGGACTCTGTTGCTTATATGGAACAACGAGTGA
AAAAGTTGGATAACTCTCAAAAGTTACTCATACGAATGACAAATGATTTGTTCAAAGATTTTCAAGCGACTCTTGAAGTTGTCAGAGCTGAGATCGTTGATGTGAGTGTG
AAGGTAAATCGCACCATGAGAGTAATGAAAATCAAGCCCCAACTGTGGGGGCAGTTTAAGTCAACAAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGCTCTACCTGAAGGAAGTCCCTGACAATACTGGCTTCTTGGAAACTCGGGTACAAGATATTTCAGAGAAAGCTGACTGTATCAATGCGGTAGCCGATTGCTTAGACGA
ATTACCCATACAAGAGTTGATGACGAGAGTTGTGCAAATCGAAAATTCTGGTAACCTCGAGCATGGAGACAGCTCGACGGACTCTGTTGCTTATATGGAACAACGAGTGA
AAAAGTTGGATAACTCTCAAAAGTTACTCATACGAATGACAAATGATTTGTTCAAAGATTTTCAAGCGACTCTTGAAGTTGTCAGAGCTGAGATCGTTGATGTGAGTGTG
AAGGTAAATCGCACCATGAGAGTAATGAAAATCAAGCCCCAACTGTGGGGGCAGTTTAAGTCAACAAGATAA
Protein sequenceShow/hide protein sequence
MLYLKEVPDNTGFLETRVQDISEKADCINAVADCLDELPIQELMTRVVQIENSGNLEHGDSSTDSVAYMEQRVKKLDNSQKLLIRMTNDLFKDFQATLEVVRAEIVDVSV
KVNRTMRVMKIKPQLWGQFKSTR