; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0028173 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028173
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRibonuclease H
Genome locationchr11:8949296..8950411
RNA-Seq ExpressionPI0028173
SyntenyPI0028173
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036950.1 uncharacterized protein E6C27_scaffold86G00300 [Cucumis melo var. makuwa]1.4e-18586.21Show/hide
Query:  MDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQENRNEST-FYNPKTLTIQVPSPFKFKDLKAVPWRYDCQVISGHSIDNITGISGI
        MD+KILTVY+GQGK+E+ DSKIC   DEV     SFLPRPLTVFYQE+ NEST F NPK LTIQVPSPFKFKDLKA+PWRYDCQVI+G  +DNITGISGI
Subjt:  MDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQENRNEST-FYNPKTLTIQVPSPFKFKDLKAVPWRYDCQVISGHSIDNITGISGI

Query:  TRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEMPIIAKDVEYKKPVTDEEANEFLKLVKQSEYKIIEQMHHTPARISLLSLFLNSEPHRK
        TRSGRCYKPD+LT PS+G+IL Q RKNEKR   EHCK+QDVEMPIIAKD+EYKK VTDEEANEFLK+VKQSEYKIIEQMH+TPARISLLSLFLNSEPHRK
Subjt:  TRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEMPIIAKDVEYKKPVTDEEANEFLKLVKQSEYKIIEQMHHTPARISLLSLFLNSEPHRK

Query:  VLLDILNKAHVGHDISVEKFNGIIGNITSSNSIVFTDDEIPPEGLGHTKALHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVRA
        +LLDILNKAHVGHDISVEKF+GIIGNITSSNSIVFTDDEIPPEGLGHTKALHIQ+KC+DYV+ARVLVDNGSALNIMPKSTLL LPVDMSHIKSSTMVV+A
Subjt:  VLLDILNKAHVGHDISVEKFNGIIGNITSSNSIVFTDDEIPPEGLGHTKALHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVRA

Query:  FDGSRREVMGDIELPIKIGPCTFNIVFQVMEITPAYSFLLGRPWIHSAGVVPSTLHQKLKFVVGSKMISLLGEEDFL
        FDGSRREVMGDIELP+KIGPC FNIVFQVMEITP YSFLLGRPWIHSAGVVPSTLHQKLKF+VGSK+I ++GEEDFL
Subjt:  FDGSRREVMGDIELPIKIGPCTFNIVFQVMEITPAYSFLLGRPWIHSAGVVPSTLHQKLKFVVGSKMISLLGEEDFL

KAA0037621.1 uncharacterized protein E6C27_scaffold277G002820 [Cucumis melo var. makuwa]2.5e-18787.27Show/hide
Query:  MDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQENRNEST-FYNPKTLTIQVPSPFKFKDLKAVPWRYDCQVISGHSIDNITGISGI
        MD+KILTVY+GQ K+E+ DSK+CA  DEV     SFLPRPLTVFYQE+ NEST F NPK LTIQVPSPFKFKDLKAVPWRYDCQVI+G S+DNITGISGI
Subjt:  MDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQENRNEST-FYNPKTLTIQVPSPFKFKDLKAVPWRYDCQVISGHSIDNITGISGI

Query:  TRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEMPIIAKDVEYKKPVTDEEANEFLKLVKQSEYKIIEQMHHTPARISLLSLFLNSEPHRK
        TRSGRCYKPD+LT PSDG+IL Q RKNEKR V EHCK+QDVEMPIIAKD+EYKK VTDEEANEFLK+VKQSEYKIIEQMHHTPARISLLSLFLNSEPHRK
Subjt:  TRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEMPIIAKDVEYKKPVTDEEANEFLKLVKQSEYKIIEQMHHTPARISLLSLFLNSEPHRK

Query:  VLLDILNKAHVGHDISVEKFNGIIGNITSSNSIVFTDDEIPPEGLGHTKALHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVRA
        VLLDILNKAHVGHDISVEKF+GIIGNIT  NSIVFTDDEIPPEGLGHTKALHIQVKC+DYV+ARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVV+ 
Subjt:  VLLDILNKAHVGHDISVEKFNGIIGNITSSNSIVFTDDEIPPEGLGHTKALHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVRA

Query:  FDGSRREVMGDIELPIKIGPCTFNIVFQVMEITPAYSFLLGRPWIHSAGVVPSTLHQKLKFVVGSKMISLLGEEDFL
        FDGSRREVMGDIELP+KIGPC FNIVFQVMEITP YSFLLGRPWIHSAGVVPSTLHQKLKF+VGSK+I ++GEEDFL
Subjt:  FDGSRREVMGDIELPIKIGPCTFNIVFQVMEITPAYSFLLGRPWIHSAGVVPSTLHQKLKFVVGSKMISLLGEEDFL

KAA0046213.1 uncharacterized protein E6C27_scaffold284G00010 [Cucumis melo var. makuwa]1.3e-18385.94Show/hide
Query:  MDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQENRNEST-FYNPKTLTIQVPSPFKFKDLKAVPWRYDCQVISGHSIDNITGISGI
        MD+KILTVY+GQ K+E+ DSK+CA  DEV     SFLPRPLTVFYQE+ N ST F NPK L IQVPSPFKFKDLKAVPWRYDCQVI+G S+DNITGISGI
Subjt:  MDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQENRNEST-FYNPKTLTIQVPSPFKFKDLKAVPWRYDCQVISGHSIDNITGISGI

Query:  TRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEMPIIAKDVEYKKPVTDEEANEFLKLVKQSEYKIIEQMHHTPARISLLSLFLNSEPHRK
        TRSGRCYKPD+LT PSDG+IL Q RKNEKR V EHCK+QDVEMPIIAKD+EYK  VTDEEANEFLK+VKQSEYKIIEQMHHTPARISLLSLFLNSEPHRK
Subjt:  TRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEMPIIAKDVEYKKPVTDEEANEFLKLVKQSEYKIIEQMHHTPARISLLSLFLNSEPHRK

Query:  VLLDILNKAHVGHDISVEKFNGIIGNITSSNSIVFTDDEIPPEGLGHTKALHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVRA
        VLLDILNKAHVGHDISV+KF+GIIGNITSSNSIVFTDD+IPPEGLGHTKALHIQVKC+DYV+ARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVV+A
Subjt:  VLLDILNKAHVGHDISVEKFNGIIGNITSSNSIVFTDDEIPPEGLGHTKALHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVRA

Query:  FDGSRREVMGDIELPIKIGPCTFNIVFQVMEITPAYSFLLGRPWIHSAGVVPSTLHQKLKFVVGSKMISLLGEEDFL
        FDGSRREVM DIELP+KIG C FNIVFQVMEITP Y FLLGRPWIHSAGVVPSTLHQKLKF+VGSK+I ++GEEDFL
Subjt:  FDGSRREVMGDIELPIKIGPCTFNIVFQVMEITPAYSFLLGRPWIHSAGVVPSTLHQKLKFVVGSKMISLLGEEDFL

KAA0067953.1 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein [Cucumis melo var. makuwa]1.3e-18385.94Show/hide
Query:  MDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQENRNEST-FYNPKTLTIQVPSPFKFKDLKAVPWRYDCQVISGHSIDNITGISGI
        MD+KILTVY+GQGK+E+ DSKICA  DEV     SFLPRPLTVFYQE+ NEST F N K LTIQVPSPFKFKDLKAVPW YDCQVI+G S+DNITGISGI
Subjt:  MDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQENRNEST-FYNPKTLTIQVPSPFKFKDLKAVPWRYDCQVISGHSIDNITGISGI

Query:  TRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEMPIIAKDVEYKKPVTDEEANEFLKLVKQSEYKIIEQMHHTPARISLLSLFLNSEPHRK
        TRSGRCYKPD+LT P DG+IL Q RKNEK  V EHCK+QDVEMPIIAKD+EYKK VTDEEANEFLK+VKQSEYKIIEQMHHTPARISLLSLFLNSEPHRK
Subjt:  TRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEMPIIAKDVEYKKPVTDEEANEFLKLVKQSEYKIIEQMHHTPARISLLSLFLNSEPHRK

Query:  VLLDILNKAHVGHDISVEKFNGIIGNITSSNSIVFTDDEIPPEGLGHTKALHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVRA
        VLLDILNKAHVGHDIS+EKF+GIIGNITSSN IVFTDD+IPPEGLGHTKALHIQVKC+DYV+ARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVV+ 
Subjt:  VLLDILNKAHVGHDISVEKFNGIIGNITSSNSIVFTDDEIPPEGLGHTKALHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVRA

Query:  FDGSRREVMGDIELPIKIGPCTFNIVFQVMEITPAYSFLLGRPWIHSAGVVPSTLHQKLKFVVGSKMISLLGEEDFL
        F+GSRREVMGDIELP+KIGPC FNIVFQVMEITP Y+FLLGRPWIHSAGVVPSTLHQKLKF+VGSK+I ++GEEDFL
Subjt:  FDGSRREVMGDIELPIKIGPCTFNIVFQVMEITPAYSFLLGRPWIHSAGVVPSTLHQKLKFVVGSKMISLLGEEDFL

TYK21788.1 uncharacterized protein E5676_scaffold1721G00440 [Cucumis melo var. makuwa]7.7e-18988.06Show/hide
Query:  MDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQENRNEST-FYNPKTLTIQVPSPFKFKDLKAVPWRYDCQVISGHSIDNITGISGI
        MD+KILTVY+GQGK+E+ DSKICA  DEV     SFLPRPLTVFYQE+ NEST F NPK LTIQVPSPFKFKDLKAVPWRYDCQVI+G S+DNITGISGI
Subjt:  MDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQENRNEST-FYNPKTLTIQVPSPFKFKDLKAVPWRYDCQVISGHSIDNITGISGI

Query:  TRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEMPIIAKDVEYKKPVTDEEANEFLKLVKQSEYKIIEQMHHTPARISLLSLFLNSEPHRK
        TRSGRCYKPD+LT P DG+IL Q RKNEK  V EHCK+QDVEMPIIAKD+EYKK VTDEEANEFLK+VKQSEYKIIEQMHHTPARISLLSLFLNSEPHRK
Subjt:  TRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEMPIIAKDVEYKKPVTDEEANEFLKLVKQSEYKIIEQMHHTPARISLLSLFLNSEPHRK

Query:  VLLDILNKAHVGHDISVEKFNGIIGNITSSNSIVFTDDEIPPEGLGHTKALHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVRA
        VLLDILNKAHVGHDISVEKF+GIIGNITSSNSIVFTDDEIPPEGLGHTKALHIQVKC+DYV+ARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVV+A
Subjt:  VLLDILNKAHVGHDISVEKFNGIIGNITSSNSIVFTDDEIPPEGLGHTKALHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVRA

Query:  FDGSRREVMGDIELPIKIGPCTFNIVFQVMEITPAYSFLLGRPWIHSAGVVPSTLHQKLKFVVGSKMISLLGEEDFL
        FDGSRREVMGDIELP+KIGPC FNIVFQVMEITP YSFLLGRPWIHSAGVVPSTLHQKLKF+VGSK+I ++GEEDFL
Subjt:  FDGSRREVMGDIELPIKIGPCTFNIVFQVMEITPAYSFLLGRPWIHSAGVVPSTLHQKLKFVVGSKMISLLGEEDFL

TrEMBL top hitse value%identityAlignment
A0A5A7T0R1 Uncharacterized protein6.6e-18686.21Show/hide
Query:  MDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQENRNEST-FYNPKTLTIQVPSPFKFKDLKAVPWRYDCQVISGHSIDNITGISGI
        MD+KILTVY+GQGK+E+ DSKIC   DEV     SFLPRPLTVFYQE+ NEST F NPK LTIQVPSPFKFKDLKA+PWRYDCQVI+G  +DNITGISGI
Subjt:  MDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQENRNEST-FYNPKTLTIQVPSPFKFKDLKAVPWRYDCQVISGHSIDNITGISGI

Query:  TRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEMPIIAKDVEYKKPVTDEEANEFLKLVKQSEYKIIEQMHHTPARISLLSLFLNSEPHRK
        TRSGRCYKPD+LT PS+G+IL Q RKNEKR   EHCK+QDVEMPIIAKD+EYKK VTDEEANEFLK+VKQSEYKIIEQMH+TPARISLLSLFLNSEPHRK
Subjt:  TRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEMPIIAKDVEYKKPVTDEEANEFLKLVKQSEYKIIEQMHHTPARISLLSLFLNSEPHRK

Query:  VLLDILNKAHVGHDISVEKFNGIIGNITSSNSIVFTDDEIPPEGLGHTKALHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVRA
        +LLDILNKAHVGHDISVEKF+GIIGNITSSNSIVFTDDEIPPEGLGHTKALHIQ+KC+DYV+ARVLVDNGSALNIMPKSTLL LPVDMSHIKSSTMVV+A
Subjt:  VLLDILNKAHVGHDISVEKFNGIIGNITSSNSIVFTDDEIPPEGLGHTKALHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVRA

Query:  FDGSRREVMGDIELPIKIGPCTFNIVFQVMEITPAYSFLLGRPWIHSAGVVPSTLHQKLKFVVGSKMISLLGEEDFL
        FDGSRREVMGDIELP+KIGPC FNIVFQVMEITP YSFLLGRPWIHSAGVVPSTLHQKLKF+VGSK+I ++GEEDFL
Subjt:  FDGSRREVMGDIELPIKIGPCTFNIVFQVMEITPAYSFLLGRPWIHSAGVVPSTLHQKLKFVVGSKMISLLGEEDFL

A0A5A7T7R4 Ribonuclease H1.2e-18787.27Show/hide
Query:  MDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQENRNEST-FYNPKTLTIQVPSPFKFKDLKAVPWRYDCQVISGHSIDNITGISGI
        MD+KILTVY+GQ K+E+ DSK+CA  DEV     SFLPRPLTVFYQE+ NEST F NPK LTIQVPSPFKFKDLKAVPWRYDCQVI+G S+DNITGISGI
Subjt:  MDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQENRNEST-FYNPKTLTIQVPSPFKFKDLKAVPWRYDCQVISGHSIDNITGISGI

Query:  TRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEMPIIAKDVEYKKPVTDEEANEFLKLVKQSEYKIIEQMHHTPARISLLSLFLNSEPHRK
        TRSGRCYKPD+LT PSDG+IL Q RKNEKR V EHCK+QDVEMPIIAKD+EYKK VTDEEANEFLK+VKQSEYKIIEQMHHTPARISLLSLFLNSEPHRK
Subjt:  TRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEMPIIAKDVEYKKPVTDEEANEFLKLVKQSEYKIIEQMHHTPARISLLSLFLNSEPHRK

Query:  VLLDILNKAHVGHDISVEKFNGIIGNITSSNSIVFTDDEIPPEGLGHTKALHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVRA
        VLLDILNKAHVGHDISVEKF+GIIGNIT  NSIVFTDDEIPPEGLGHTKALHIQVKC+DYV+ARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVV+ 
Subjt:  VLLDILNKAHVGHDISVEKFNGIIGNITSSNSIVFTDDEIPPEGLGHTKALHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVRA

Query:  FDGSRREVMGDIELPIKIGPCTFNIVFQVMEITPAYSFLLGRPWIHSAGVVPSTLHQKLKFVVGSKMISLLGEEDFL
        FDGSRREVMGDIELP+KIGPC FNIVFQVMEITP YSFLLGRPWIHSAGVVPSTLHQKLKF+VGSK+I ++GEEDFL
Subjt:  FDGSRREVMGDIELPIKIGPCTFNIVFQVMEITPAYSFLLGRPWIHSAGVVPSTLHQKLKFVVGSKMISLLGEEDFL

A0A5A7TRL7 Ribonuclease H6.1e-18485.94Show/hide
Query:  MDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQENRNEST-FYNPKTLTIQVPSPFKFKDLKAVPWRYDCQVISGHSIDNITGISGI
        MD+KILTVY+GQ K+E+ DSK+CA  DEV     SFLPRPLTVFYQE+ N ST F NPK L IQVPSPFKFKDLKAVPWRYDCQVI+G S+DNITGISGI
Subjt:  MDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQENRNEST-FYNPKTLTIQVPSPFKFKDLKAVPWRYDCQVISGHSIDNITGISGI

Query:  TRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEMPIIAKDVEYKKPVTDEEANEFLKLVKQSEYKIIEQMHHTPARISLLSLFLNSEPHRK
        TRSGRCYKPD+LT PSDG+IL Q RKNEKR V EHCK+QDVEMPIIAKD+EYK  VTDEEANEFLK+VKQSEYKIIEQMHHTPARISLLSLFLNSEPHRK
Subjt:  TRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEMPIIAKDVEYKKPVTDEEANEFLKLVKQSEYKIIEQMHHTPARISLLSLFLNSEPHRK

Query:  VLLDILNKAHVGHDISVEKFNGIIGNITSSNSIVFTDDEIPPEGLGHTKALHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVRA
        VLLDILNKAHVGHDISV+KF+GIIGNITSSNSIVFTDD+IPPEGLGHTKALHIQVKC+DYV+ARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVV+A
Subjt:  VLLDILNKAHVGHDISVEKFNGIIGNITSSNSIVFTDDEIPPEGLGHTKALHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVRA

Query:  FDGSRREVMGDIELPIKIGPCTFNIVFQVMEITPAYSFLLGRPWIHSAGVVPSTLHQKLKFVVGSKMISLLGEEDFL
        FDGSRREVM DIELP+KIG C FNIVFQVMEITP Y FLLGRPWIHSAGVVPSTLHQKLKF+VGSK+I ++GEEDFL
Subjt:  FDGSRREVMGDIELPIKIGPCTFNIVFQVMEITPAYSFLLGRPWIHSAGVVPSTLHQKLKFVVGSKMISLLGEEDFL

A0A5A7VIM6 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein6.1e-18485.94Show/hide
Query:  MDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQENRNEST-FYNPKTLTIQVPSPFKFKDLKAVPWRYDCQVISGHSIDNITGISGI
        MD+KILTVY+GQGK+E+ DSKICA  DEV     SFLPRPLTVFYQE+ NEST F N K LTIQVPSPFKFKDLKAVPW YDCQVI+G S+DNITGISGI
Subjt:  MDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQENRNEST-FYNPKTLTIQVPSPFKFKDLKAVPWRYDCQVISGHSIDNITGISGI

Query:  TRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEMPIIAKDVEYKKPVTDEEANEFLKLVKQSEYKIIEQMHHTPARISLLSLFLNSEPHRK
        TRSGRCYKPD+LT P DG+IL Q RKNEK  V EHCK+QDVEMPIIAKD+EYKK VTDEEANEFLK+VKQSEYKIIEQMHHTPARISLLSLFLNSEPHRK
Subjt:  TRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEMPIIAKDVEYKKPVTDEEANEFLKLVKQSEYKIIEQMHHTPARISLLSLFLNSEPHRK

Query:  VLLDILNKAHVGHDISVEKFNGIIGNITSSNSIVFTDDEIPPEGLGHTKALHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVRA
        VLLDILNKAHVGHDIS+EKF+GIIGNITSSN IVFTDD+IPPEGLGHTKALHIQVKC+DYV+ARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVV+ 
Subjt:  VLLDILNKAHVGHDISVEKFNGIIGNITSSNSIVFTDDEIPPEGLGHTKALHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVRA

Query:  FDGSRREVMGDIELPIKIGPCTFNIVFQVMEITPAYSFLLGRPWIHSAGVVPSTLHQKLKFVVGSKMISLLGEEDFL
        F+GSRREVMGDIELP+KIGPC FNIVFQVMEITP Y+FLLGRPWIHSAGVVPSTLHQKLKF+VGSK+I ++GEEDFL
Subjt:  FDGSRREVMGDIELPIKIGPCTFNIVFQVMEITPAYSFLLGRPWIHSAGVVPSTLHQKLKFVVGSKMISLLGEEDFL

A0A5D3DEB3 Retrotrans_gag domain-containing protein3.7e-18988.06Show/hide
Query:  MDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQENRNEST-FYNPKTLTIQVPSPFKFKDLKAVPWRYDCQVISGHSIDNITGISGI
        MD+KILTVY+GQGK+E+ DSKICA  DEV     SFLPRPLTVFYQE+ NEST F NPK LTIQVPSPFKFKDLKAVPWRYDCQVI+G S+DNITGISGI
Subjt:  MDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQENRNEST-FYNPKTLTIQVPSPFKFKDLKAVPWRYDCQVISGHSIDNITGISGI

Query:  TRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEMPIIAKDVEYKKPVTDEEANEFLKLVKQSEYKIIEQMHHTPARISLLSLFLNSEPHRK
        TRSGRCYKPD+LT P DG+IL Q RKNEK  V EHCK+QDVEMPIIAKD+EYKK VTDEEANEFLK+VKQSEYKIIEQMHHTPARISLLSLFLNSEPHRK
Subjt:  TRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEMPIIAKDVEYKKPVTDEEANEFLKLVKQSEYKIIEQMHHTPARISLLSLFLNSEPHRK

Query:  VLLDILNKAHVGHDISVEKFNGIIGNITSSNSIVFTDDEIPPEGLGHTKALHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVRA
        VLLDILNKAHVGHDISVEKF+GIIGNITSSNSIVFTDDEIPPEGLGHTKALHIQVKC+DYV+ARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVV+A
Subjt:  VLLDILNKAHVGHDISVEKFNGIIGNITSSNSIVFTDDEIPPEGLGHTKALHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVRA

Query:  FDGSRREVMGDIELPIKIGPCTFNIVFQVMEITPAYSFLLGRPWIHSAGVVPSTLHQKLKFVVGSKMISLLGEEDFL
        FDGSRREVMGDIELP+KIGPC FNIVFQVMEITP YSFLLGRPWIHSAGVVPSTLHQKLKF+VGSK+I ++GEEDFL
Subjt:  FDGSRREVMGDIELPIKIGPCTFNIVFQVMEITPAYSFLLGRPWIHSAGVVPSTLHQKLKFVVGSKMISLLGEEDFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCAAAGATACTCACGGTATATAAGGGACAAGGAAAAGAGGAGGTGAATGACAGTAAAATATGTGCATCAACGGATGAGGTTTCCTTTTTACCAAGGCCTTTAAC
GGTTTTCTATCAAGAAAATCGTAATGAGTCAACTTTCTACAATCCTAAAACACTCACGATCCAAGTACCTAGTCCTTTCAAATTTAAGGATTTAAAAGCAGTGCCTTGGA
GGTATGATTGTCAAGTTATATCAGGTCATTCAATTGATAATATTACAGGAATCAGTGGGATAACTCGAAGTGGAAGATGTTACAAACCAGATGATTTGACAGAACCTTCA
GATGGTGTGATACTGGGGCAAAGGAGGAAAAATGAAAAAAGAATTGTGAATGAACATTGCAAAGAGCAGGATGTGGAGATGCCCATCATAGCTAAGGATGTAGAATACAA
AAAGCCTGTTACCGATGAGGAAGCAAACGAATTCTTGAAATTAGTAAAACAAAGTGAATATAAGATCATAGAGCAAATGCATCATACTCCAGCTCGAATTTCTTTATTAT
CTTTGTTCTTGAATTCAGAGCCTCATCGCAAAGTGCTATTAGATATTTTGAACAAGGCACATGTTGGACATGACATTTCGGTAGAAAAATTCAATGGAATTATTGGAAAC
ATTACATCTTCAAATTCCATAGTCTTTACGGATGATGAAATTCCTCCTGAAGGTTTGGGCCATACAAAAGCACTGCATATTCAAGTAAAGTGCAGAGACTACGTCGTAGC
AAGAGTTTTAGTGGATAATGGATCAGCTCTTAATATAATGCCTAAATCTACACTATTGAAACTTCCAGTGGACATGTCACACATAAAATCAAGCACTATGGTTGTAAGAG
CTTTTGATGGGTCACGTAGAGAAGTCATGGGTGACATTGAGTTACCAATCAAAATTGGCCCATGTACTTTCAATATAGTGTTTCAGGTCATGGAAATAACACCTGCATAC
AGTTTTTTGTTAGGACGTCCTTGGATTCATTCTGCTGGAGTGGTGCCATCCACATTGCATCAAAAATTGAAATTTGTTGTTGGGAGCAAGATGATTAGTCTATTGGGAGA
GGAGGATTTTTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGCAAAGATACTCACGGTATATAAGGGACAAGGAAAAGAGGAGGTGAATGACAGTAAAATATGTGCATCAACGGATGAGGTTTCCTTTTTACCAAGGCCTTTAAC
GGTTTTCTATCAAGAAAATCGTAATGAGTCAACTTTCTACAATCCTAAAACACTCACGATCCAAGTACCTAGTCCTTTCAAATTTAAGGATTTAAAAGCAGTGCCTTGGA
GGTATGATTGTCAAGTTATATCAGGTCATTCAATTGATAATATTACAGGAATCAGTGGGATAACTCGAAGTGGAAGATGTTACAAACCAGATGATTTGACAGAACCTTCA
GATGGTGTGATACTGGGGCAAAGGAGGAAAAATGAAAAAAGAATTGTGAATGAACATTGCAAAGAGCAGGATGTGGAGATGCCCATCATAGCTAAGGATGTAGAATACAA
AAAGCCTGTTACCGATGAGGAAGCAAACGAATTCTTGAAATTAGTAAAACAAAGTGAATATAAGATCATAGAGCAAATGCATCATACTCCAGCTCGAATTTCTTTATTAT
CTTTGTTCTTGAATTCAGAGCCTCATCGCAAAGTGCTATTAGATATTTTGAACAAGGCACATGTTGGACATGACATTTCGGTAGAAAAATTCAATGGAATTATTGGAAAC
ATTACATCTTCAAATTCCATAGTCTTTACGGATGATGAAATTCCTCCTGAAGGTTTGGGCCATACAAAAGCACTGCATATTCAAGTAAAGTGCAGAGACTACGTCGTAGC
AAGAGTTTTAGTGGATAATGGATCAGCTCTTAATATAATGCCTAAATCTACACTATTGAAACTTCCAGTGGACATGTCACACATAAAATCAAGCACTATGGTTGTAAGAG
CTTTTGATGGGTCACGTAGAGAAGTCATGGGTGACATTGAGTTACCAATCAAAATTGGCCCATGTACTTTCAATATAGTGTTTCAGGTCATGGAAATAACACCTGCATAC
AGTTTTTTGTTAGGACGTCCTTGGATTCATTCTGCTGGAGTGGTGCCATCCACATTGCATCAAAAATTGAAATTTGTTGTTGGGAGCAAGATGATTAGTCTATTGGGAGA
GGAGGATTTTTTATAA
Protein sequenceShow/hide protein sequence
MDAKILTVYKGQGKEEVNDSKICASTDEVSFLPRPLTVFYQENRNESTFYNPKTLTIQVPSPFKFKDLKAVPWRYDCQVISGHSIDNITGISGITRSGRCYKPDDLTEPS
DGVILGQRRKNEKRIVNEHCKEQDVEMPIIAKDVEYKKPVTDEEANEFLKLVKQSEYKIIEQMHHTPARISLLSLFLNSEPHRKVLLDILNKAHVGHDISVEKFNGIIGN
ITSSNSIVFTDDEIPPEGLGHTKALHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVRAFDGSRREVMGDIELPIKIGPCTFNIVFQVMEITPAY
SFLLGRPWIHSAGVVPSTLHQKLKFVVGSKMISLLGEEDFL