; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0028177 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028177
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionribonuclease P protein subunit p38
Genome locationchr09:6531863..6535073
RNA-Seq ExpressionPI0028177
SyntenyPI0028177
Gene Ontology termsGO:0043232 - intracellular non-membrane-bounded organelle (cellular component)
InterPro domainsIPR004038 - Ribosomal protein L7Ae/L30e/S12e/Gadd45
IPR029064 - 50S ribosomal protein L30e-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008466263.1 PREDICTED: uncharacterized protein LOC103503720 isoform X2 [Cucumis melo]2.0e-7583.33Show/hide
Query:  MGKNPKSSAHPVAALQSKPNEDSYEGERLDELLLSIQREIETARVLNAESLPEKIWLKKQFAIGVNEVTRVLERMTPSGDSARLMNPNYKMCTVKLQ---
        MGKNPKSSAHPVA LQSKP EDSYEGERLDELLLSIQREI+TAR LNAESLPEK WLKKQFAIGVNEVTR LERMTP GDSARLMNPNYK C VKLQ   
Subjt:  MGKNPKSSAHPVAALQSKPNEDSYEGERLDELLLSIQREIETARVLNAESLPEKIWLKKQFAIGVNEVTRVLERMTPSGDSARLMNPNYKMCTVKLQ---

Query:  --------------AILLTASCNPRWLTNHVPSLAMSRKVPLILVKDKEGSLKLGELVNLKTAIAIGIKAYGSPVNQLIDEILQRT
                      AILLTA+CNPRWLTNHVP LAMSRKVPLILVKDKEGSL+LGELVNLKTAIAIGIK+ GSPVNQLIDEILQRT
Subjt:  --------------AILLTASCNPRWLTNHVPSLAMSRKVPLILVKDKEGSLKLGELVNLKTAIAIGIKAYGSPVNQLIDEILQRT

XP_008466280.1 PREDICTED: ribonuclease P protein subunit p38 isoform X5 [Cucumis melo]2.8e-7791.18Show/hide
Query:  MGKNPKSSAHPVAALQSKPNED-SYEGERLDELLLSIQREIETARVLNAESLPEKIWLKKQFAIGVNEVTRVLERMTPSGDSARLMNPNYKMCTVKLQAI
        MGKNPKSSAHPVA LQSKP ED SYEGERLDELLLSIQREI+TAR LNAESLPEK WLKKQFAIGVNEVTR LERMTP GDSARLMNPNYK C VKLQAI
Subjt:  MGKNPKSSAHPVAALQSKPNED-SYEGERLDELLLSIQREIETARVLNAESLPEKIWLKKQFAIGVNEVTRVLERMTPSGDSARLMNPNYKMCTVKLQAI

Query:  LLTASCNPRWLTNHVPSLAMSRKVPLILVKDKEGSLKLGELVNLKTAIAIGIKAYGSPVNQLIDEILQRT
        LLTA+CNPRWLTNHVP LAMSRKVPLILVKDKEGSL+LGELVNLKTAIAIGIK+ GSPVNQLIDEILQRT
Subjt:  LLTASCNPRWLTNHVPSLAMSRKVPLILVKDKEGSLKLGELVNLKTAIAIGIKAYGSPVNQLIDEILQRT

XP_008466288.1 PREDICTED: ribonuclease P protein subunit p38 isoform X6 [Cucumis melo]1.1e-7891.72Show/hide
Query:  MGKNPKSSAHPVAALQSKPNEDSYEGERLDELLLSIQREIETARVLNAESLPEKIWLKKQFAIGVNEVTRVLERMTPSGDSARLMNPNYKMCTVKLQAIL
        MGKNPKSSAHPVA LQSKP EDSYEGERLDELLLSIQREI+TAR LNAESLPEK WLKKQFAIGVNEVTR LERMTP GDSARLMNPNYK C VKLQAIL
Subjt:  MGKNPKSSAHPVAALQSKPNEDSYEGERLDELLLSIQREIETARVLNAESLPEKIWLKKQFAIGVNEVTRVLERMTPSGDSARLMNPNYKMCTVKLQAIL

Query:  LTASCNPRWLTNHVPSLAMSRKVPLILVKDKEGSLKLGELVNLKTAIAIGIKAYGSPVNQLIDEILQRT
        LTA+CNPRWLTNHVP LAMSRKVPLILVKDKEGSL+LGELVNLKTAIAIGIK+ GSPVNQLIDEILQRT
Subjt:  LTASCNPRWLTNHVPSLAMSRKVPLILVKDKEGSLKLGELVNLKTAIAIGIKAYGSPVNQLIDEILQRT

XP_011654557.1 ribonuclease P protein subunit p38 [Cucumis sativus]1.5e-7890.64Show/hide
Query:  MGKNPKSSAHPVAALQSKPNED-SYEGERLDELLLSIQREIETARVLNAESLPEKIWLKKQFAIGVNEVTRVLERMTPSGDSARLMNPNYKMCTVKLQAI
        MGKNPKSS+HPVA LQSKPN+D SYEGERLDELLLSIQREI+T R LNAESLPEK WLKKQFAIGVNEVTRVLERMTP GDSARLMNPNYK CTVKLQAI
Subjt:  MGKNPKSSAHPVAALQSKPNED-SYEGERLDELLLSIQREIETARVLNAESLPEKIWLKKQFAIGVNEVTRVLERMTPSGDSARLMNPNYKMCTVKLQAI

Query:  LLTASCNPRWLTNHVPSLAMSRKVPLILVKDKEGSLKLGELVNLKTAIAIGIKAYGSPVNQLIDEILQRTT
        LLTA+CNPRWLTNHVP+LAMSRKVPLILVKDKEGSL+LGELV+LKTAIAIGIKA GSP+NQLIDEILQRTT
Subjt:  LLTASCNPRWLTNHVPSLAMSRKVPLILVKDKEGSLKLGELVNLKTAIAIGIKAYGSPVNQLIDEILQRTT

XP_038875290.1 ribonuclease P protein subunit p38 [Benincasa hispida]1.4e-7690.59Show/hide
Query:  MGKNPKSSAHPVAALQSKPNEDSYEGERLDELLLSIQREIETARVLNAESLPEKIWLKKQFAIGVNEVTRVLERMTPSGDSARLMNPNYKMCTVKLQAIL
        MGK  KSSA P A LQSKPNEDSYEGERLDE L SIQREI+TAR LNAESLPEKIWLKKQFAIGVNEVTRVLERMTPSGDSAR+MNPNYK CTVKLQA+L
Subjt:  MGKNPKSSAHPVAALQSKPNEDSYEGERLDELLLSIQREIETARVLNAESLPEKIWLKKQFAIGVNEVTRVLERMTPSGDSARLMNPNYKMCTVKLQAIL

Query:  LTASCNPRWLTNHVPSLAMSRKVPLILVKDKEGSLKLGELVNLKTAIAIGIKAYGSPVNQLIDEILQRTT
        LTA+CNPRWLTNHVPSLAMSRKVPLILVKDKEGSL+LGELVNLKTAIAIGIKA GSPVNQLIDEILQR T
Subjt:  LTASCNPRWLTNHVPSLAMSRKVPLILVKDKEGSLKLGELVNLKTAIAIGIKAYGSPVNQLIDEILQRTT

TrEMBL top hitse value%identityAlignment
A0A1S3CQU5 uncharacterized protein LOC103503720 isoform X29.6e-7683.33Show/hide
Query:  MGKNPKSSAHPVAALQSKPNEDSYEGERLDELLLSIQREIETARVLNAESLPEKIWLKKQFAIGVNEVTRVLERMTPSGDSARLMNPNYKMCTVKLQ---
        MGKNPKSSAHPVA LQSKP EDSYEGERLDELLLSIQREI+TAR LNAESLPEK WLKKQFAIGVNEVTR LERMTP GDSARLMNPNYK C VKLQ   
Subjt:  MGKNPKSSAHPVAALQSKPNEDSYEGERLDELLLSIQREIETARVLNAESLPEKIWLKKQFAIGVNEVTRVLERMTPSGDSARLMNPNYKMCTVKLQ---

Query:  --------------AILLTASCNPRWLTNHVPSLAMSRKVPLILVKDKEGSLKLGELVNLKTAIAIGIKAYGSPVNQLIDEILQRT
                      AILLTA+CNPRWLTNHVP LAMSRKVPLILVKDKEGSL+LGELVNLKTAIAIGIK+ GSPVNQLIDEILQRT
Subjt:  --------------AILLTASCNPRWLTNHVPSLAMSRKVPLILVKDKEGSLKLGELVNLKTAIAIGIKAYGSPVNQLIDEILQRT

A0A1S3CQV2 ribonuclease P protein subunit p38 isoform X51.3e-7791.18Show/hide
Query:  MGKNPKSSAHPVAALQSKPNED-SYEGERLDELLLSIQREIETARVLNAESLPEKIWLKKQFAIGVNEVTRVLERMTPSGDSARLMNPNYKMCTVKLQAI
        MGKNPKSSAHPVA LQSKP ED SYEGERLDELLLSIQREI+TAR LNAESLPEK WLKKQFAIGVNEVTR LERMTP GDSARLMNPNYK C VKLQAI
Subjt:  MGKNPKSSAHPVAALQSKPNED-SYEGERLDELLLSIQREIETARVLNAESLPEKIWLKKQFAIGVNEVTRVLERMTPSGDSARLMNPNYKMCTVKLQAI

Query:  LLTASCNPRWLTNHVPSLAMSRKVPLILVKDKEGSLKLGELVNLKTAIAIGIKAYGSPVNQLIDEILQRT
        LLTA+CNPRWLTNHVP LAMSRKVPLILVKDKEGSL+LGELVNLKTAIAIGIK+ GSPVNQLIDEILQRT
Subjt:  LLTASCNPRWLTNHVPSLAMSRKVPLILVKDKEGSLKLGELVNLKTAIAIGIKAYGSPVNQLIDEILQRT

A0A1S3CR39 ribonuclease P protein subunit p38 isoform X65.5e-7991.72Show/hide
Query:  MGKNPKSSAHPVAALQSKPNEDSYEGERLDELLLSIQREIETARVLNAESLPEKIWLKKQFAIGVNEVTRVLERMTPSGDSARLMNPNYKMCTVKLQAIL
        MGKNPKSSAHPVA LQSKP EDSYEGERLDELLLSIQREI+TAR LNAESLPEK WLKKQFAIGVNEVTR LERMTP GDSARLMNPNYK C VKLQAIL
Subjt:  MGKNPKSSAHPVAALQSKPNEDSYEGERLDELLLSIQREIETARVLNAESLPEKIWLKKQFAIGVNEVTRVLERMTPSGDSARLMNPNYKMCTVKLQAIL

Query:  LTASCNPRWLTNHVPSLAMSRKVPLILVKDKEGSLKLGELVNLKTAIAIGIKAYGSPVNQLIDEILQRT
        LTA+CNPRWLTNHVP LAMSRKVPLILVKDKEGSL+LGELVNLKTAIAIGIK+ GSPVNQLIDEILQRT
Subjt:  LTASCNPRWLTNHVPSLAMSRKVPLILVKDKEGSLKLGELVNLKTAIAIGIKAYGSPVNQLIDEILQRT

A0A1S3CS60 uncharacterized protein LOC103503720 isoform X12.4e-7482.89Show/hide
Query:  MGKNPKSSAHPVAALQSKPNED-SYEGERLDELLLSIQREIETARVLNAESLPEKIWLKKQFAIGVNEVTRVLERMTPSGDSARLMNPNYKMCTVKLQ--
        MGKNPKSSAHPVA LQSKP ED SYEGERLDELLLSIQREI+TAR LNAESLPEK WLKKQFAIGVNEVTR LERMTP GDSARLMNPNYK C VKLQ  
Subjt:  MGKNPKSSAHPVAALQSKPNED-SYEGERLDELLLSIQREIETARVLNAESLPEKIWLKKQFAIGVNEVTRVLERMTPSGDSARLMNPNYKMCTVKLQ--

Query:  ---------------AILLTASCNPRWLTNHVPSLAMSRKVPLILVKDKEGSLKLGELVNLKTAIAIGIKAYGSPVNQLIDEILQRT
                       AILLTA+CNPRWLTNHVP LAMSRKVPLILVKDKEGSL+LGELVNLKTAIAIGIK+ GSPVNQLIDEILQRT
Subjt:  ---------------AILLTASCNPRWLTNHVPSLAMSRKVPLILVKDKEGSLKLGELVNLKTAIAIGIKAYGSPVNQLIDEILQRT

A0A6J1FDN9 ribonuclease P protein subunit p383.1e-7488.24Show/hide
Query:  MGKNPKSSAHPVAALQSKPNEDSYEGERLDELLLSIQREIETARVLNAESLPEKIWLKKQFAIGVNEVTRVLERMTPSGDSARLMNPNYKMCTVKLQAIL
        MGK  KSS  PVA +QSK NEDSYEGERLDELL SIQREI+ AR LNAESLPEKIWLKKQFAIGVNEVTRVLERMTPSGDSAR++NPNYK CTV+LQAIL
Subjt:  MGKNPKSSAHPVAALQSKPNEDSYEGERLDELLLSIQREIETARVLNAESLPEKIWLKKQFAIGVNEVTRVLERMTPSGDSARLMNPNYKMCTVKLQAIL

Query:  LTASCNPRWLTNHVPSLAMSRKVPLILVKDKEGSLKLGELVNLKTAIAIGIKAYGSPVNQLIDEILQRTT
        LTA CNPRWLTNHVPSLA+SRKVPLILVKDKEGSL+LGELVNLKTAIAIGIKA GSPVNQLI EILQRTT
Subjt:  LTASCNPRWLTNHVPSLAMSRKVPLILVKDKEGSLKLGELVNLKTAIAIGIKAYGSPVNQLIDEILQRTT

SwissProt top hitse value%identityAlignment
P78345 Ribonuclease P protein subunit p384.3e-0430.28Show/hide
Query:  LKKQFAIGVNEVTRVLERMTPSGDSARLMNPNYKMCTVKLQAILLTASCNPRWLTNHVPSLAMSRKVPLILVKDKEGSLKLGELVNLKTAIAIGIKAYGS
        ++KQ AIGVNEVTR LER                    +L  +L+  S  P  +T+H+  L++SR VP   V     S ++  ++ LK  +A+   A+  
Subjt:  LKKQFAIGVNEVTRVLERMTPSGDSARLMNPNYKMCTVKLQAILLTASCNPRWLTNHVPSLAMSRKVPLILVKDKEGSLKLGELVNLKTAIAIGIKAYGS

Query:  PVNQLIDEI
             +DE+
Subjt:  PVNQLIDEI

Q32LC1 Ribonuclease P protein subunit p387.3e-0431.25Show/hide
Query:  LKKQFAIGVNEVTRVLERMTPSGDSARLMNPNYKMCTVKLQAILLTASCNPRWLTNHVPSLAMSRKVPLILVKDKEGSLKLGELVNLKTAIAIGIKAYGS
        ++KQ AIG+NEVTR LER                    +L   L   S  P  +T+H+  L++SR VP   V     S +L  ++ LK  +A+G K   +
Subjt:  LKKQFAIGVNEVTRVLERMTPSGDSARLMNPNYKMCTVKLQAILLTASCNPRWLTNHVPSLAMSRKVPLILVKDKEGSLKLGELVNLKTAIAIGIKAYGS

Query:  PVNQLIDEILQR
           + +  IL R
Subjt:  PVNQLIDEILQR

Q80UU2 Ribonuclease P protein subunit p389.5e-0428.07Show/hide
Query:  IWLKKQFAIGVNEVTRVLERMTPSGDSARLMNPNYKMCTVKLQAILLTASCNPRWLTNHVPSLAMSRKVPLILVKDKEGSLKLGELVNLKTAIAIGIKAY
        + ++KQ  IGVNEVTR LER                    +L  +L+  S  P  +T+H+  L++SR VP   V   + S ++  ++ LK  +A+G +  
Subjt:  IWLKKQFAIGVNEVTRVLERMTPSGDSARLMNPNYKMCTVKLQAILLTASCNPRWLTNHVPSLAMSRKVPLILVKDKEGSLKLGELVNLKTAIAIGIKAY

Query:  GSPVNQLIDEILQR
               ++ I+ R
Subjt:  GSPVNQLIDEILQR

Arabidopsis top hitse value%identityAlignment
AT4G01790.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein1.7e-4058.78Show/hide
Query:  DSYEGERLDELLLSIQREIETARVLNAESLPEKIWLKKQFAIGVNEVTRVLERMTPSGDSARLMNPNYKMCTVKLQAILLTASCNPRWLTNHVPSLAMSR
        D YEGERL  LL  IQR IET+++ N  SLPEKIWLKKQ AIG+NEVTRVLERM P+  S +  NP       +LQ ++L A C PR LT H+P+LA SR
Subjt:  DSYEGERLDELLLSIQREIETARVLNAESLPEKIWLKKQFAIGVNEVTRVLERMTPSGDSARLMNPNYKMCTVKLQAILLTASCNPRWLTNHVPSLAMSR

Query:  KVPLILVKD-KEGSLKLGELVNLKTAIAIGIKAYGSPVNQLIDEILQR
         VP++ V+D K  SL+LGELV LKTA+AIGIKA G+ +N L+ +IL R
Subjt:  KVPLILVKD-KEGSLKLGELVNLKTAIAIGIKAYGSPVNQLIDEILQR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAGAACCCTAAATCTTCTGCTCATCCTGTTGCGGCCCTTCAATCCAAACCTAACGAAGATTCCTACGAAGGTGAACGTCTCGATGAGTTGCTACTGTCGATTCA
GAGAGAGATAGAGACAGCAAGAGTTTTGAATGCGGAATCCTTGCCGGAAAAAATTTGGCTTAAGAAACAATTTGCAATTGGAGTTAATGAGGTTACTAGAGTTCTTGAAC
GGATGACACCAAGTGGAGATTCTGCTCGCTTAATGAACCCTAATTATAAGATGTGTACAGTCAAGCTTCAGGCTATACTATTAACAGCCAGTTGCAACCCTCGATGGCTT
ACAAACCATGTGCCAAGCTTGGCCATGTCAAGGAAGGTACCATTGATACTCGTGAAAGATAAAGAAGGATCGTTAAAGTTAGGTGAACTCGTTAACCTTAAAACAGCAAT
TGCAATTGGAATAAAGGCGTATGGGAGCCCTGTCAATCAACTTATTGATGAAATTCTTCAAAGAACAACATAA
mRNA sequenceShow/hide mRNA sequence
ATACAACATTGTTTTTCGTTTAATCCTTTGTTCGTGGATTCTCTACATATTTTGAGGACATATTTTAGTTGAATTCCACGGTTGCATTACTCTACCAAAATTTCAAATAA
AGCCGCGAGTTGGGCGTGGAGAAGGCAGTGCTAGTTCGTCATCGTCCCCGTTCCACTACTGTTACTTCCAATCGGACAACGCCGCCGTTATTTCTCTCCAGACTTTGAAA
CTACACTTTCCACCAAGCTTTCACTAATGGGAAAGAACCCTAAATCTTCTGCTCATCCTGTTGCGGCCCTTCAATCCAAACCTAACGAAGATTCCTACGAAGGTGAACGT
CTCGATGAGTTGCTACTGTCGATTCAGAGAGAGATAGAGACAGCAAGAGTTTTGAATGCGGAATCCTTGCCGGAAAAAATTTGGCTTAAGAAACAATTTGCAATTGGAGT
TAATGAGGTTACTAGAGTTCTTGAACGGATGACACCAAGTGGAGATTCTGCTCGCTTAATGAACCCTAATTATAAGATGTGTACAGTCAAGCTTCAGGCTATACTATTAA
CAGCCAGTTGCAACCCTCGATGGCTTACAAACCATGTGCCAAGCTTGGCCATGTCAAGGAAGGTACCATTGATACTCGTGAAAGATAAAGAAGGATCGTTAAAGTTAGGT
GAACTCGTTAACCTTAAAACAGCAATTGCAATTGGAATAAAGGCGTATGGGAGCCCTGTCAATCAACTTATTGATGAAATTCTTCAAAGAACAACATAAAAACAAGTTTC
ATGAGTACAATAAAGTTGTCTGGTGTTCACTGTACAGTAAAAATGATGTGAAATTGAAGCAGGTTCTTGTCTTCTTCCCTCTAGCAGTCTGACATTTCTAGCTTGCTAAT
CACATGAAATGGATTTCAGTTGATTCATTCTAGATAATGACCACCACTTTAGTTGGAAAGATAGTTCTTAGACTTTTAGTTGGAAATAAGGTATGAAAGTAAGGTGTATC
CTTGTAAGGAAAGTTTGCAGAGGCCTGAGATAGTCGGATTGTAATTCTTATGTAATTCATTGATTATTTAAATTGGGGAATATTGATTTTTTGAAAAGGGTCATTGTTTG
TGGCTGGAGTTCTGAAAATTCATAACAACACGTATCTTGTACATTCGATT
Protein sequenceShow/hide protein sequence
MGKNPKSSAHPVAALQSKPNEDSYEGERLDELLLSIQREIETARVLNAESLPEKIWLKKQFAIGVNEVTRVLERMTPSGDSARLMNPNYKMCTVKLQAILLTASCNPRWL
TNHVPSLAMSRKVPLILVKDKEGSLKLGELVNLKTAIAIGIKAYGSPVNQLIDEILQRTT