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PI0028196 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028196
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionE3 ubiquitin-protein ligase SHPRH isoform X4
Genome locationchr12:14599784..14599996
RNA-Seq ExpressionPI0028196
SyntenyPI0028196
Gene Ontology termsGO:0005524 - ATP binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051973.1 E3 ubiquitin-protein ligase SHPRH isoform X4 [Cucumis melo var. makuwa]9.9e-1374.58Show/hide
Query:  EGNLTMFHYVMSKKIRKKIMKLGMNSKRTTLQVAMNKKIYGITMTKGQWDELIQGKKQE
        EG+ TMFH+VM KKIRKKIMKL  NSK+TTLQVAM+K I GITMTK +WD+LI+GKK E
Subjt:  EGNLTMFHYVMSKKIRKKIMKLGMNSKRTTLQVAMNKKIYGITMTKGQWDELIQGKKQE
TrEMBL top hitse value%identityAlignment
A0A5A7U7S6 E3 ubiquitin-protein ligase SHPRH isoform X44.8e-1374.58Show/hide
Query:  EGNLTMFHYVMSKKIRKKIMKLGMNSKRTTLQVAMNKKIYGITMTKGQWDELIQGKKQE
        EG+ TMFH+VM KKIRKKIMKL  NSK+TTLQVAM+K I GITMTK +WD+LI+GKK E
Subjt:  EGNLTMFHYVMSKKIRKKIMKLGMNSKRTTLQVAMNKKIYGITMTKGQWDELIQGKKQE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGACGAAGGAAACCTGACGATGTTCCATTACGTTATGTCGAAAAAGATTCGCAAGAAGATTATGAAGCTTGGCATGAACAGCAAAAGGACGACTCTTCAAGTGGC
GATGAACAAGAAAATATATGGAATTACAATGACGAAAGGCCAATGGGACGAATTAATACAAGGCAAGAAGCAAGAATGGAAGTTCACCATGATTATAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGACTGACGAAGGAAACCTGACGATGTTCCATTACGTTATGTCGAAAAAGATTCGCAAGAAGATTATGAAGCTTGGCATGAACAGCAAAAGGACGACTCTTCAAGTGGC
GATGAACAAGAAAATATATGGAATTACAATGACGAAAGGCCAATGGGACGAATTAATACAAGGCAAGAAGCAAGAATGGAAGTTCACCATGATTATAAAATGA
Protein sequenceShow/hide protein sequence
MTDEGNLTMFHYVMSKKIRKKIMKLGMNSKRTTLQVAMNKKIYGITMTKGQWDELIQGKKQEWKFTMIIK