; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0028199 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028199
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPhotosystem II 10 kDa polypeptide, chloroplastic
Genome locationchr07:6376804..6379441
RNA-Seq ExpressionPI0028199
SyntenyPI0028199
Gene Ontology termsGO:0010270 - photosystem II oxygen evolving complex assembly (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0009654 - photosystem II oxygen evolving complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR006814 - Photosystem II PsbR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062951.1 photosystem II 10 kDa polypeptide [Cucumis melo var. makuwa]1.3e-6494.93Show/hide
Query:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVSFKVEASGGKKIKTDKPYGINGTMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
        MAAS+MTSVSLKPAPFTVEKSARGLPSLARNS SFKV ASGGKKIKTDKPYGING+MNLRDG+DASGRK KGKGVYQFVDKYGANVDGYSPIYDTKDWSP
Subjt:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVSFKVEASGGKKIKTDKPYGINGTMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP

Query:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
        +GDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
Subjt:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ

XP_008451826.1 PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic [Cucumis melo]5.8e-6595.65Show/hide
Query:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVSFKVEASGGKKIKTDKPYGINGTMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
        MAASVMTSVSLKPAPFTVEKSARGLPSLARNS SFKV ASGGKKIKTDKPYGING+MNLRDG+DASGRK KGKGVYQFVDKYGANVDGYSPIYDTKDWSP
Subjt:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVSFKVEASGGKKIKTDKPYGINGTMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP

Query:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
        +GDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
Subjt:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ

XP_022136536.1 photosystem II 10 kDa polypeptide, chloroplastic [Momordica charantia]2.3e-6697.1Show/hide
Query:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVSFKVEASGGKKIKTDKPYGINGTMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
        MAASVMTSVSLKPAPFTVEKSA+GLPSLAR S SFKVEASGGKKIKTDKPYGING+MNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
Subjt:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVSFKVEASGGKKIKTDKPYGINGTMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP

Query:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
        SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
Subjt:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ

XP_023553544.1 photosystem II 10 kDa polypeptide, chloroplastic [Cucurbita pepo subsp. pepo]2.2e-6494.2Show/hide
Query:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVSFKVEASGGKKIKTDKPYGINGTMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
        MAASVMTSVSLKPAPFTVEK+ARG+PSLAR S  FKVEASGGKKIKTDKPYGING+MNLRDG+DASGRKGKGKGVYQ+VDKYGANVDGYSPIYDTKDWSP
Subjt:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVSFKVEASGGKKIKTDKPYGINGTMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP

Query:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
        SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
Subjt:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ

XP_038876356.1 photosystem II 10 kDa polypeptide, chloroplastic-like [Benincasa hispida]6.2e-6797.83Show/hide
Query:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVSFKVEASGGKKIKTDKPYGINGTMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
        MAASVMTSVSLKPAPFTVEKSA+GLPSLARNSV FKVEASGGKKIKTDKPYGING+MNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
Subjt:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVSFKVEASGGKKIKTDKPYGINGTMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP

Query:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
        SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
Subjt:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ

TrEMBL top hitse value%identityAlignment
A0A0A0KXH3 Photosystem II 10 kDa polypeptide, chloroplastic1.4e-6494.93Show/hide
Query:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVSFKVEASGGKKIKTDKPYGINGTMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
        MAASVMTSVSLKPAPFTVEKSA GLPSLAR S SFKV ASGGKKIKTDKPYGING+MNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
Subjt:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVSFKVEASGGKKIKTDKPYGINGTMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP

Query:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
        +GDVYVGGTTGLAIWA TLAGLLAGGALLVYNTSALVQ
Subjt:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ

A0A1S3BSD1 Photosystem II 10 kDa polypeptide, chloroplastic2.8e-6595.65Show/hide
Query:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVSFKVEASGGKKIKTDKPYGINGTMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
        MAASVMTSVSLKPAPFTVEKSARGLPSLARNS SFKV ASGGKKIKTDKPYGING+MNLRDG+DASGRK KGKGVYQFVDKYGANVDGYSPIYDTKDWSP
Subjt:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVSFKVEASGGKKIKTDKPYGINGTMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP

Query:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
        +GDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
Subjt:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ

A0A5A7VB86 Photosystem II 10 kDa polypeptide, chloroplastic6.2e-6594.93Show/hide
Query:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVSFKVEASGGKKIKTDKPYGINGTMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
        MAAS+MTSVSLKPAPFTVEKSARGLPSLARNS SFKV ASGGKKIKTDKPYGING+MNLRDG+DASGRK KGKGVYQFVDKYGANVDGYSPIYDTKDWSP
Subjt:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVSFKVEASGGKKIKTDKPYGINGTMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP

Query:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
        +GDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
Subjt:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ

A0A5D3CXX1 Photosystem II 10 kDa polypeptide, chloroplastic2.8e-6595.65Show/hide
Query:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVSFKVEASGGKKIKTDKPYGINGTMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
        MAASVMTSVSLKPAPFTVEKSARGLPSLARNS SFKV ASGGKKIKTDKPYGING+MNLRDG+DASGRK KGKGVYQFVDKYGANVDGYSPIYDTKDWSP
Subjt:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVSFKVEASGGKKIKTDKPYGINGTMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP

Query:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
        +GDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
Subjt:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ

A0A6J1C3S3 Photosystem II 10 kDa polypeptide, chloroplastic1.1e-6697.1Show/hide
Query:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVSFKVEASGGKKIKTDKPYGINGTMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
        MAASVMTSVSLKPAPFTVEKSA+GLPSLAR S SFKVEASGGKKIKTDKPYGING+MNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
Subjt:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVSFKVEASGGKKIKTDKPYGINGTMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP

Query:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
        SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
Subjt:  SGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ

SwissProt top hitse value%identityAlignment
P06183 Photosystem II 10 kDa polypeptide, chloroplastic3.3e-5581.29Show/hide
Query:  MAASVMTSVSLKPAPFTVEK-SARGLPSLARNSVSFKVEASGGKKIKTDKPYGINGTMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWS
        MA++VM+S+SLKP  FT+EK S +GLPSLAR+S SFKV ASG KK+KTDKPYGING+M LRDG+DASGRK KGKGVYQ+VDKYGANVDGYSPIY+T +WS
Subjt:  MAASVMTSVSLKPAPFTVEK-SARGLPSLARNSVSFKVEASGGKKIKTDKPYGINGTMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWS

Query:  PSGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
        PSGDVYVGGTTGLAIWAVTL G+LAGGALLVYNTSAL Q
Subjt:  PSGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ

P27202 Photosystem II 10 kDa polypeptide, chloroplastic6.9e-5379.29Show/hide
Query:  MAASVM-TSVSLKPAPFTVEK-SARGLPSLARNSVSFKVEASGGKKIKTDKPYGINGTMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDW
        MAASVM +SV+LKPA FTVEK +ARGLPSL R   SFK+ ASG KKIKTDKP+GING+M+LRDG+DASGRKGKG GVY++VDKYGANVDGYSPIY+  +W
Subjt:  MAASVM-TSVSLKPAPFTVEK-SARGLPSLARNSVSFKVEASGGKKIKTDKPYGINGTMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDW

Query:  SPSGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
        S SGDVY GG TGLAIWAVTLAG+LAGGALLVYNTSAL Q
Subjt:  SPSGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ

P49108 Photosystem II 10 kDa polypeptide, chloroplastic3.4e-5279.43Show/hide
Query:  MAASVM-TSVSLKPAPFTVEK-SARGLPSLARNS-VSFKVEASGGKKIKTDKPYGINGTMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKD
        MAASVM +SV+LKPA FTVEK SARGLPSL R S  SF++ ASG KKIKTDKP+G+NG+M+LRDG+DASGRKGKG GVY+FVDKYGANVDGYSPIY+  +
Subjt:  MAASVM-TSVSLKPAPFTVEK-SARGLPSLARNS-VSFKVEASGGKKIKTDKPYGINGTMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKD

Query:  WSPSGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
        WS SGDVY GG TGLAIWAVTLAG+LAGGALLVYNTSAL Q
Subjt:  WSPSGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ

Q40163 Photosystem II 10 kDa polypeptide, chloroplastic1.3e-5480.58Show/hide
Query:  MAASVMTSVSLKPAPFTVEK-SARGLPSLARNSVSFKVEASGGKKIKTDKPYGINGTMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWS
        MA++VM+S+SLKP  FT+EK S +GLPSL R+S SFKV ASG KK+KTDKPYGING+M LRDG+DASGRK KGKGVYQ+VDKYGANVDGYSPIY+T +WS
Subjt:  MAASVMTSVSLKPAPFTVEK-SARGLPSLARNSVSFKVEASGGKKIKTDKPYGINGTMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWS

Query:  PSGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
        PSGDVYVGGTTGLAIWAVTL G+LAGGALLVYNTSAL Q
Subjt:  PSGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ

Q40519 Photosystem II 10 kDa polypeptide, chloroplastic2.3e-5682.01Show/hide
Query:  MAASVMTSVSLKPAPFTVEKSA-RGLPSLARNSVSFKVEASGGKKIKTDKPYGINGTMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWS
        MA++VM   SLKPAPF+VEK+A +GLPSLAR+S SF+V+ASG KK+KTDKPYGING+M+LRDG+DASGRK KGKGVYQFVDKYGANVDGYSPIY+T DWS
Subjt:  MAASVMTSVSLKPAPFTVEKSA-RGLPSLARNSVSFKVEASGGKKIKTDKPYGINGTMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWS

Query:  PSGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
        PSGDVYVGGTTGLAIWAVTL G+LAGGALLV+NTSAL Q
Subjt:  PSGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ

Arabidopsis top hitse value%identityAlignment
AT1G79040.1 photosystem II subunit R4.9e-5479.29Show/hide
Query:  MAASVM-TSVSLKPAPFTVEK-SARGLPSLARNSVSFKVEASGGKKIKTDKPYGINGTMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDW
        MAASVM +SV+LKPA FTVEK +ARGLPSL R   SFK+ ASG KKIKTDKP+GING+M+LRDG+DASGRKGKG GVY++VDKYGANVDGYSPIY+  +W
Subjt:  MAASVM-TSVSLKPAPFTVEK-SARGLPSLARNSVSFKVEASGGKKIKTDKPYGINGTMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDW

Query:  SPSGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ
        S SGDVY GG TGLAIWAVTLAG+LAGGALLVYNTSAL Q
Subjt:  SPSGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTSALVQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCCTCAGTGATGACCTCAGTGAGTCTTAAACCAGCTCCCTTCACAGTCGAGAAATCGGCGAGAGGTCTTCCATCTCTGGCGAGAAACTCCGTCTCCTTCAAGGT
CGAGGCCAGTGGTGGGAAGAAGATCAAGACCGACAAACCCTACGGAATCAACGGTACGATGAATTTGAGGGATGGACTTGATGCATCGGGAAGGAAGGGCAAGGGAAAGG
GAGTGTACCAATTTGTCGACAAGTACGGAGCCAATGTCGATGGTTACAGTCCCATCTACGATACCAAAGACTGGTCTCCAAGTGGTGATGTCTATGTTGGTGGTACTACT
GGGTTAGCCATTTGGGCAGTGACTTTGGCTGGTCTTCTTGCTGGAGGTGCTCTTCTTGTGTACAACACCAGTGCTTTGGTGCAGTAA
mRNA sequenceShow/hide mRNA sequence
CAAAGATCAACGGCCATTGTTTAAACTTCAACAGAAGCGGCTAAAATAGTTCGCGAAAAGATTCCGATAACACAATAAGATTATATCCAGATTACTGCCATTCACGAAAT
GCCACGTGTCGCCCTACCAATCACACTTCTCAGATTATCAAGCTCCGAGTTCCGTTTTGCGCCATTGCAGATTTTCGAGCTAAAGAAGAAGAAGAAGAAAAGAAAAGAAG
AAGCTCATTGATCGGAAATGGCGGCCTCAGTGATGACCTCAGTGAGTCTTAAACCAGCTCCCTTCACAGTCGAGAAATCGGCGAGAGGTCTTCCATCTCTGGCGAGAAAC
TCCGTCTCCTTCAAGGTCGAGGCCAGTGGTGGGAAGAAGATCAAGACCGACAAACCCTACGGAATCAACGGTACGATGAATTTGAGGGATGGACTTGATGCATCGGGAAG
GAAGGGCAAGGGAAAGGGAGTGTACCAATTTGTCGACAAGTACGGAGCCAATGTCGATGGTTACAGTCCCATCTACGATACCAAAGACTGGTCTCCAAGTGGTGATGTCT
ATGTTGGTGGTACTACTGGGTTAGCCATTTGGGCAGTGACTTTGGCTGGTCTTCTTGCTGGAGGTGCTCTTCTTGTGTACAACACCAGTGCTTTGGTGCAGTAAGGTGGA
GGGAAAGTTAAAAGTCATGTTTTTTCTTCACATTAGTTTTTGTAGCATGTTATTATTATGAACAAACATTATTATTAAGAAATTCTGTGTAATTATCTGGATAATTGCGT
CATAAATGTTTGGTAAGATAATTCTTCTCCTTCCCATCTTTTCTTCTTGTTCTTTCCTTTTACTTTGTATATTAGGGTTGGCACCGAGTTTGAAATCACTTTTTGGATAT
AGTACTTTTCTAGGTCAAACAATTCTTCTAATAATTAAAGTAGTTTTTGAGTGTTTATTCT
Protein sequenceShow/hide protein sequence
MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVSFKVEASGGKKIKTDKPYGINGTMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSPSGDVYVGGTT
GLAIWAVTLAGLLAGGALLVYNTSALVQ