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PI0028219 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028219
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationchr12:23591086..23591544
RNA-Seq ExpressionPI0028219
SyntenyPI0028219
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR044675 - E3 ubiquitin-protein ligase RING1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067739.1 RING-H2 finger protein ATL64-like [Cucumis melo var. makuwa]1.1e-4367.32Show/hide
Query:  MSSPIILPPLSPLSPSP-PLLHPLIVLRTFFEDLRTVSIFLLLVLFLVIVLLCIEGFLKS-EQELSENLDIQAPVFHYGGDEDGEQECVICLCKIEEREK
        MSSPI+LP L PL PSP P LH  IVL    EDL  +S+ LL VL LVI +LC   F KS E+ELS+NLDIQA VFHYG D D EQEC ICLC+IEE EK
Subjt:  MSSPIILPPLSPLSPSP-PLLHPLIVLRTFFEDLRTVSIFLLLVLFLVIVLLCIEGFLKS-EQELSENLDIQAPVFHYGGDEDGEQECVICLCKIEEREK

Query:  CRKINECGHVFHKDCIDQWFAVERYCPLCRTSIRVVVDRGENVMASSSSSTTL
        CRK+  CGH FHKDCID+WF VE +CPLCRTS+ VVVDR EN MA SSS  TL
Subjt:  CRKINECGHVFHKDCIDQWFAVERYCPLCRTSIRVVVDRGENVMASSSSSTTL

KAA0067740.1 RING-H2 finger protein ATL63-like [Cucumis melo var. makuwa]6.8e-4366.88Show/hide
Query:  MSSPIILPPL--SPLSPSPPLLHPLIVLRTFFEDLRTVSIFLLLVLFLVIVLLCIEGFLKS-EQELSENLDIQAPVFHYGGDEDGEQECVICLCKIEERE
        MSSPI+LP L   PLSP PPL  P+I+ R+  EDL  +S+FLLLVL LVI +LC +   KS E+ELS+NLDIQA +FHYG D D +QEC ICLC+IEE E
Subjt:  MSSPIILPPL--SPLSPSPPLLHPLIVLRTFFEDLRTVSIFLLLVLFLVIVLLCIEGFLKS-EQELSENLDIQAPVFHYGGDEDGEQECVICLCKIEERE

Query:  KCRKINECGHVFHKDCIDQWFAVERYCPLCRTSIRVVVDRGENVMASSSSSTTL
        KCRK+  CGHVFHKDCID+WF VE +CPLCRT + VVVDR ENVMASSSS  TL
Subjt:  KCRKINECGHVFHKDCIDQWFAVERYCPLCRTSIRVVVDRGENVMASSSSSTTL

XP_008457566.1 PREDICTED: RING-H2 finger protein ATL64-like [Cucumis melo]1.2e-4266.23Show/hide
Query:  MSSPIILPPLSPLSPSP-PLLHPLIVLRTFFEDLRTVSIFLLLVLFLVIVLLCIEGFLKSEQE--LSENLDIQAPVFHYGGDEDGEQECVICLCKIEERE
        MSSPI+LP L PL PSP P LH  IVL    EDL  +S+ LLLVL LVI +LC +   KS++E  LS+N+DIQAP+FHY  D D EQEC ICLC+IEE E
Subjt:  MSSPIILPPLSPLSPSP-PLLHPLIVLRTFFEDLRTVSIFLLLVLFLVIVLLCIEGFLKSEQE--LSENLDIQAPVFHYGGDEDGEQECVICLCKIEERE

Query:  KCRKINECGHVFHKDCIDQWFAVERYCPLCRTSIRVVVDRGENVMASSSSSTTL
        KCRKI  CGHVFHKDCID+WF VE +CPLCRTS+ VVVD  EN MASSSS  TL
Subjt:  KCRKINECGHVFHKDCIDQWFAVERYCPLCRTSIRVVVDRGENVMASSSSSTTL

XP_008457567.1 PREDICTED: RING-H2 finger protein ATL63-like [Cucumis melo]4.7e-4468.63Show/hide
Query:  MSSPIILPPLSPLSPSP-PLLHPLIVLRTFFEDLRTVSIFLLLVLFLVIVLLCIEGFLKS-EQELSENLDIQAPVFHYGGDEDGEQECVICLCKIEEREK
        MSSPI+LP L PL PSP P LH  IVL    EDL  +S+FLLLVL LVI +LC +   KS E+ELS+NL+IQAP+FHYG D D EQEC ICLC+IEE EK
Subjt:  MSSPIILPPLSPLSPSP-PLLHPLIVLRTFFEDLRTVSIFLLLVLFLVIVLLCIEGFLKS-EQELSENLDIQAPVFHYGGDEDGEQECVICLCKIEEREK

Query:  CRKINECGHVFHKDCIDQWFAVERYCPLCRTSIRVVVDRGENVMASSSSSTTL
        CRK+  CGH FHKDCID+WF VE +CPLCRTS  VVVDR ENVMASSSS  TL
Subjt:  CRKINECGHVFHKDCIDQWFAVERYCPLCRTSIRVVVDRGENVMASSSSSTTL

XP_011648512.2 RING-H2 finger protein ATL79 [Cucumis sativus]4.6e-3964.79Show/hide
Query:  PLSPSP-PLLHPLIVLRTFFEDLRTVSIFLLLVLFLVIVLLCIEGFLKSE-QELSENLDIQAPVFHYGGDEDGEQECVICLCKIEEREKCRKINECGHVF
        PLSPSP P LH  I+L  FF  L TVS+ LL+VLFL I +LC +   KS+ +E SENLDI+AP+FHY G E  EQECVICLC+IEE EKCRK+  CGHVF
Subjt:  PLSPSP-PLLHPLIVLRTFFEDLRTVSIFLLLVLFLVIVLLCIEGFLKSE-QELSENLDIQAPVFHYGGDEDGEQECVICLCKIEEREKCRKINECGHVF

Query:  HKDCIDQWFAVERYCPLCRTSI-RVVVDRGENVMASSSSSTT
        HKDCID+WF V  +CP+CRTS+  VV+DRG N MASSSS  T
Subjt:  HKDCIDQWFAVERYCPLCRTSI-RVVVDRGENVMASSSSSTT

TrEMBL top hitse value%identityAlignment
A0A1S3C741 RING-type E3 ubiquitin transferase2.3e-4468.63Show/hide
Query:  MSSPIILPPLSPLSPSP-PLLHPLIVLRTFFEDLRTVSIFLLLVLFLVIVLLCIEGFLKS-EQELSENLDIQAPVFHYGGDEDGEQECVICLCKIEEREK
        MSSPI+LP L PL PSP P LH  IVL    EDL  +S+FLLLVL LVI +LC +   KS E+ELS+NL+IQAP+FHYG D D EQEC ICLC+IEE EK
Subjt:  MSSPIILPPLSPLSPSP-PLLHPLIVLRTFFEDLRTVSIFLLLVLFLVIVLLCIEGFLKS-EQELSENLDIQAPVFHYGGDEDGEQECVICLCKIEEREK

Query:  CRKINECGHVFHKDCIDQWFAVERYCPLCRTSIRVVVDRGENVMASSSSSTTL
        CRK+  CGH FHKDCID+WF VE +CPLCRTS  VVVDR ENVMASSSS  TL
Subjt:  CRKINECGHVFHKDCIDQWFAVERYCPLCRTSIRVVVDRGENVMASSSSSTTL

A0A5A7VKL1 RING-type E3 ubiquitin transferase3.3e-4366.88Show/hide
Query:  MSSPIILPPL--SPLSPSPPLLHPLIVLRTFFEDLRTVSIFLLLVLFLVIVLLCIEGFLKS-EQELSENLDIQAPVFHYGGDEDGEQECVICLCKIEERE
        MSSPI+LP L   PLSP PPL  P+I+ R+  EDL  +S+FLLLVL LVI +LC +   KS E+ELS+NLDIQA +FHYG D D +QEC ICLC+IEE E
Subjt:  MSSPIILPPL--SPLSPSPPLLHPLIVLRTFFEDLRTVSIFLLLVLFLVIVLLCIEGFLKS-EQELSENLDIQAPVFHYGGDEDGEQECVICLCKIEERE

Query:  KCRKINECGHVFHKDCIDQWFAVERYCPLCRTSIRVVVDRGENVMASSSSSTTL
        KCRK+  CGHVFHKDCID+WF VE +CPLCRT + VVVDR ENVMASSSS  TL
Subjt:  KCRKINECGHVFHKDCIDQWFAVERYCPLCRTSIRVVVDRGENVMASSSSSTTL

A0A5A7VRG5 RING-type E3 ubiquitin transferase5.1e-4467.32Show/hide
Query:  MSSPIILPPLSPLSPSP-PLLHPLIVLRTFFEDLRTVSIFLLLVLFLVIVLLCIEGFLKS-EQELSENLDIQAPVFHYGGDEDGEQECVICLCKIEEREK
        MSSPI+LP L PL PSP P LH  IVL    EDL  +S+ LL VL LVI +LC   F KS E+ELS+NLDIQA VFHYG D D EQEC ICLC+IEE EK
Subjt:  MSSPIILPPLSPLSPSP-PLLHPLIVLRTFFEDLRTVSIFLLLVLFLVIVLLCIEGFLKS-EQELSENLDIQAPVFHYGGDEDGEQECVICLCKIEEREK

Query:  CRKINECGHVFHKDCIDQWFAVERYCPLCRTSIRVVVDRGENVMASSSSSTTL
        CRK+  CGH FHKDCID+WF VE +CPLCRTS+ VVVDR EN MA SSS  TL
Subjt:  CRKINECGHVFHKDCIDQWFAVERYCPLCRTSIRVVVDRGENVMASSSSSTTL

A0A5D3BEE2 RING-type E3 ubiquitin transferase5.6e-4366.23Show/hide
Query:  MSSPIILPPLSPLSPSP-PLLHPLIVLRTFFEDLRTVSIFLLLVLFLVIVLLCIEGFLKSEQE--LSENLDIQAPVFHYGGDEDGEQECVICLCKIEERE
        MSSPI+LP L PL PSP P LH  IVL    EDL  +S+ LLLVL LVI +LC +   KS++E  LS+N+DIQAP+FHY  D D EQEC ICLC+IEE E
Subjt:  MSSPIILPPLSPLSPSP-PLLHPLIVLRTFFEDLRTVSIFLLLVLFLVIVLLCIEGFLKSEQE--LSENLDIQAPVFHYGGDEDGEQECVICLCKIEERE

Query:  KCRKINECGHVFHKDCIDQWFAVERYCPLCRTSIRVVVDRGENVMASSSSSTTL
        KCRKI  CGHVFHKDCID+WF VE +CPLCRTS+ VVVD  EN MASSSS  TL
Subjt:  KCRKINECGHVFHKDCIDQWFAVERYCPLCRTSIRVVVDRGENVMASSSSSTTL

A0A5D3BG26 RING-type E3 ubiquitin transferase2.3e-4468.63Show/hide
Query:  MSSPIILPPLSPLSPSP-PLLHPLIVLRTFFEDLRTVSIFLLLVLFLVIVLLCIEGFLKS-EQELSENLDIQAPVFHYGGDEDGEQECVICLCKIEEREK
        MSSPI+LP L PL PSP P LH  IVL    EDL  +S+FLLLVL LVI +LC +   KS E+ELS+NL+IQAP+FHYG D D EQEC ICLC+IEE EK
Subjt:  MSSPIILPPLSPLSPSP-PLLHPLIVLRTFFEDLRTVSIFLLLVLFLVIVLLCIEGFLKS-EQELSENLDIQAPVFHYGGDEDGEQECVICLCKIEEREK

Query:  CRKINECGHVFHKDCIDQWFAVERYCPLCRTSIRVVVDRGENVMASSSSSTTL
        CRK+  CGH FHKDCID+WF VE +CPLCRTS  VVVDR ENVMASSSS  TL
Subjt:  CRKINECGHVFHKDCIDQWFAVERYCPLCRTSIRVVVDRGENVMASSSSSTTL

SwissProt top hitse value%identityAlignment
O22255 RING-H2 finger protein ATL644.2e-1135.79Show/hide
Query:  EQELSENLDIQAPVFHYGGDE----DGEQECVICLCKIEEREKCRKINECGHVFHKDCIDQWFAVERYCPLCRTSIRVVVDRGENVMASSSSSTT
        +Q L + +  + P+F Y        + ++EC +CL + EE ++ R + +CGH FH DCID WF     CPLCR  ++      E   +SSSS  T
Subjt:  EQELSENLDIQAPVFHYGGDE----DGEQECVICLCKIEEREKCRKINECGHVFHKDCIDQWFAVERYCPLCRTSIRVVVDRGENVMASSSSSTT

P93823 RING-H2 finger protein ATL14.2e-1144.19Show/hide
Query:  SEQELSENLDIQA----PVFHY------GGDED---GEQECVICLCKIEEREKCRKINECGHVFHKDCIDQWFAVERYCPLCRTSI
        S  E++  LD  A    PVF +       G+ED     QEC +CL + +E EK R I  C HVFH DCID W      CPLCRTS+
Subjt:  SEQELSENLDIQA----PVFHY------GGDED---GEQECVICLCKIEEREKCRKINECGHVFHKDCIDQWFAVERYCPLCRTSI

Q9LUZ9 RING-H2 finger protein ATL631.4e-1137.93Show/hide
Query:  KSEQELSENLDIQAPVFHY---GGDEDGEQECVICLCKIEEREKCRKINECGHVFHKDCIDQWFAVERYCPLCRTSIRVVVDRGENV
        + ++ L  ++    P+F Y     +ED E+ECVICL   E  +  RK+  CGH FH +CID W +    CPLCR+ +   V   EN+
Subjt:  KSEQELSENLDIQAPVFHY---GGDEDGEQECVICLCKIEEREKCRKINECGHVFHKDCIDQWFAVERYCPLCRTSIRVVVDRGENV

Q9LZJ6 RING-H2 finger protein ATL53.6e-1044.44Show/hide
Query:  PVFHYG--GDEDGEQECVICLCKIEEREKCRKINECGHVFHKDCIDQWFAVERYCPLCRTSIR
        P+F Y     E   +EC +CL + EE ++ R + +CGHVFH DCID WF     CPLCR  ++
Subjt:  PVFHYG--GDEDGEQECVICLCKIEEREKCRKINECGHVFHKDCIDQWFAVERYCPLCRTSIR

Q9P7E1 Uncharacterized RING finger protein P4H10.073.6e-1032.74Show/hide
Query:  PLLHPLIVLRTFFEDLRTVSIFLLLVLFLVIVLLCIEGFLKSEQELSENLDIQAPVFHYGGDEDGEQECVICLCKIEEREKCRKINECGHVFHKDCIDQW
        P  HP++   + F D  T    LL        L  I G  K      ++L+    VF + G    ++ C++CL   E  ++CR++ +C H FH++CIDQW
Subjt:  PLLHPLIVLRTFFEDLRTVSIFLLLVLFLVIVLLCIEGFLKSEQELSENLDIQAPVFHYGGDEDGEQECVICLCKIEEREKCRKINECGHVFHKDCIDQW

Query:  F-AVERYCPLCRT
          + +  CPLCRT
Subjt:  F-AVERYCPLCRT

Arabidopsis top hitse value%identityAlignment
AT1G04360.1 RING/U-box superfamily protein3.0e-1244.19Show/hide
Query:  SEQELSENLDIQA----PVFHY------GGDED---GEQECVICLCKIEEREKCRKINECGHVFHKDCIDQWFAVERYCPLCRTSI
        S  E++  LD  A    PVF +       G+ED     QEC +CL + +E EK R I  C HVFH DCID W      CPLCRTS+
Subjt:  SEQELSENLDIQA----PVFHY------GGDED---GEQECVICLCKIEEREKCRKINECGHVFHKDCIDQWFAVERYCPLCRTSI

AT2G47560.1 RING/U-box superfamily protein3.0e-1235.79Show/hide
Query:  EQELSENLDIQAPVFHYGGDE----DGEQECVICLCKIEEREKCRKINECGHVFHKDCIDQWFAVERYCPLCRTSIRVVVDRGENVMASSSSSTT
        +Q L + +  + P+F Y        + ++EC +CL + EE ++ R + +CGH FH DCID WF     CPLCR  ++      E   +SSSS  T
Subjt:  EQELSENLDIQAPVFHYGGDE----DGEQECVICLCKIEEREKCRKINECGHVFHKDCIDQWFAVERYCPLCRTSIRVVVDRGENVMASSSSSTT

AT3G62690.1 AtL52.5e-1144.44Show/hide
Query:  PVFHYG--GDEDGEQECVICLCKIEEREKCRKINECGHVFHKDCIDQWFAVERYCPLCRTSIR
        P+F Y     E   +EC +CL + EE ++ R + +CGHVFH DCID WF     CPLCR  ++
Subjt:  PVFHYG--GDEDGEQECVICLCKIEEREKCRKINECGHVFHKDCIDQWFAVERYCPLCRTSIR

AT5G40250.1 RING/U-box superfamily protein7.3e-1140.28Show/hide
Query:  PVFHY---------GGDEDGEQE---CVICLCKIEEREKCRKINECGHVFHKDCIDQWFAVERYCPLCRTSI
        PVFHY         GG     QE   C +CLC+  E++K R +  C H FH +CID W      CPLCR ++
Subjt:  PVFHY---------GGDEDGEQE---CVICLCKIEEREKCRKINECGHVFHKDCIDQWFAVERYCPLCRTSI

AT5G58580.1 TOXICOS EN LEVADURA 631.0e-1237.93Show/hide
Query:  KSEQELSENLDIQAPVFHY---GGDEDGEQECVICLCKIEEREKCRKINECGHVFHKDCIDQWFAVERYCPLCRTSIRVVVDRGENV
        + ++ L  ++    P+F Y     +ED E+ECVICL   E  +  RK+  CGH FH +CID W +    CPLCR+ +   V   EN+
Subjt:  KSEQELSENLDIQAPVFHY---GGDEDGEQECVICLCKIEEREKCRKINECGHVFHKDCIDQWFAVERYCPLCRTSIRVVVDRGENV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATCTCCAATTATTTTACCGCCCCTCTCGCCGTTGTCACCGTCGCCACCCCTGTTGCACCCACTAATCGTACTTCGTACCTTCTTTGAGGATTTGCGGACTGTCTC
CATATTTCTTCTCTTAGTACTATTTTTAGTCATTGTCCTTTTATGTATCGAAGGATTCCTCAAATCTGAACAAGAGTTGTCGGAGAATCTGGACATTCAAGCACCGGTTT
TTCATTACGGTGGAGATGAAGATGGCGAACAAGAATGTGTGATTTGCCTTTGCAAAATTGAAGAACGAGAGAAGTGTAGAAAGATAAACGAGTGTGGTCACGTGTTTCAT
AAAGACTGCATTGACCAGTGGTTTGCAGTGGAGCGATATTGTCCACTTTGTCGAACCTCCATTCGTGTGGTGGTTGATCGCGGTGAAAATGTCATGGCTTCTTCTTCATC
TTCAACGACTTTGAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCATCTCCAATTATTTTACCGCCCCTCTCGCCGTTGTCACCGTCGCCACCCCTGTTGCACCCACTAATCGTACTTCGTACCTTCTTTGAGGATTTGCGGACTGTCTC
CATATTTCTTCTCTTAGTACTATTTTTAGTCATTGTCCTTTTATGTATCGAAGGATTCCTCAAATCTGAACAAGAGTTGTCGGAGAATCTGGACATTCAAGCACCGGTTT
TTCATTACGGTGGAGATGAAGATGGCGAACAAGAATGTGTGATTTGCCTTTGCAAAATTGAAGAACGAGAGAAGTGTAGAAAGATAAACGAGTGTGGTCACGTGTTTCAT
AAAGACTGCATTGACCAGTGGTTTGCAGTGGAGCGATATTGTCCACTTTGTCGAACCTCCATTCGTGTGGTGGTTGATCGCGGTGAAAATGTCATGGCTTCTTCTTCATC
TTCAACGACTTTGAACTAA
Protein sequenceShow/hide protein sequence
MSSPIILPPLSPLSPSPPLLHPLIVLRTFFEDLRTVSIFLLLVLFLVIVLLCIEGFLKSEQELSENLDIQAPVFHYGGDEDGEQECVICLCKIEEREKCRKINECGHVFH
KDCIDQWFAVERYCPLCRTSIRVVVDRGENVMASSSSSTTLN