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PI0028257 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028257
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr11:17837915..17838079
RNA-Seq ExpressionPI0028257
SyntenyPI0028257
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033880.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]3.1e-1475.47Show/hide
Query:  MTNNDISDDVDEGDSTYMTSIGEDIHYIETSNEWSQWRDELAERMFSDWELRN
        MTN DI DD+DE DST++T+ G+DIHYIET NEW+QWRDELA+ MFSDWELRN
Subjt:  MTNNDISDDVDEGDSTYMTSIGEDIHYIETSNEWSQWRDELAERMFSDWELRN
KAA0060101.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.4e-1474.07Show/hide
Query:  MTNNDISDDVDEGDSTYMTSIGEDIHYIETSNEWSQWRDELAERMFSDWELRNQ
        MTN +I DD+DE DST+ T++G+DIHYIETSNEW+ WRDEL E MFSDWELRNQ
Subjt:  MTNNDISDDVDEGDSTYMTSIGEDIHYIETSNEWSQWRDELAERMFSDWELRNQ
KAA0067470.1 retrotransposon protein [Cucumis melo var. makuwa]1.4e-1475.93Show/hide
Query:  MTNNDISDDVDEGDSTYMTSIGEDIHYIETSNEWSQWRDELAERMFSDWELRNQ
        MTN DI D++DE DST+ T+  +DIHYIETSNEWSQWRD+LAE MFSDWELRNQ
Subjt:  MTNNDISDDVDEGDSTYMTSIGEDIHYIETSNEWSQWRDELAERMFSDWELRNQ
TYJ99699.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.4e-1475.93Show/hide
Query:  MTNNDISDDVDEGDSTYMTSIGEDIHYIETSNEWSQWRDELAERMFSDWELRNQ
        MTN DI D++DE DST+ T+  +DIHYIETSNEWSQWRD+LAE MFSDWELRNQ
Subjt:  MTNNDISDDVDEGDSTYMTSIGEDIHYIETSNEWSQWRDELAERMFSDWELRNQ
XP_008442271.1 PREDICTED: uncharacterized protein LOC103486178 [Cucumis melo]1.4e-1474.07Show/hide
Query:  MTNNDISDDVDEGDSTYMTSIGEDIHYIETSNEWSQWRDELAERMFSDWELRNQ
        MTN +I DD+DE DST+ T++G+DIHYIETSNEW+ WRDEL E MFSDWELRNQ
Subjt:  MTNNDISDDVDEGDSTYMTSIGEDIHYIETSNEWSQWRDELAERMFSDWELRNQ
TrEMBL top hitse value%identityAlignment
A0A1S3B5B3 uncharacterized protein LOC1034861786.7e-1574.07Show/hide
Query:  MTNNDISDDVDEGDSTYMTSIGEDIHYIETSNEWSQWRDELAERMFSDWELRNQ
        MTN +I DD+DE DST+ T++G+DIHYIETSNEW+ WRDEL E MFSDWELRNQ
Subjt:  MTNNDISDDVDEGDSTYMTSIGEDIHYIETSNEWSQWRDELAERMFSDWELRNQ
A0A5A7VJX3 Retrotransposon protein6.7e-1575.93Show/hide
Query:  MTNNDISDDVDEGDSTYMTSIGEDIHYIETSNEWSQWRDELAERMFSDWELRNQ
        MTN DI D++DE DST+ T+  +DIHYIETSNEWSQWRD+LAE MFSDWELRNQ
Subjt:  MTNNDISDDVDEGDSTYMTSIGEDIHYIETSNEWSQWRDELAERMFSDWELRNQ
A0A5D3BL48 Putative nuclease HARBI16.7e-1575.93Show/hide
Query:  MTNNDISDDVDEGDSTYMTSIGEDIHYIETSNEWSQWRDELAERMFSDWELRNQ
        MTN DI D++DE DST+ T+  +DIHYIETSNEWSQWRD+LAE MFSDWELRNQ
Subjt:  MTNNDISDDVDEGDSTYMTSIGEDIHYIETSNEWSQWRDELAERMFSDWELRNQ
A0A5D3BQ11 Putative nuclease HARBI11.5e-1475.47Show/hide
Query:  MTNNDISDDVDEGDSTYMTSIGEDIHYIETSNEWSQWRDELAERMFSDWELRN
        MTN DI DD+DE DST++T+ G+DIHYIET NEW+QWRDELA+ MFSDWELRN
Subjt:  MTNNDISDDVDEGDSTYMTSIGEDIHYIETSNEWSQWRDELAERMFSDWELRN
A0A5D3CA52 Putative nuclease HARBI16.7e-1574.07Show/hide
Query:  MTNNDISDDVDEGDSTYMTSIGEDIHYIETSNEWSQWRDELAERMFSDWELRNQ
        MTN +I DD+DE DST+ T++G+DIHYIETSNEW+ WRDEL E MFSDWELRNQ
Subjt:  MTNNDISDDVDEGDSTYMTSIGEDIHYIETSNEWSQWRDELAERMFSDWELRNQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAACAATGACATATCAGATGACGTAGATGAGGGTGACTCTACATACATGACCAGTATTGGTGAAGATATTCATTACATAGAGACCTCGAATGAATGGAGTCAATG
GAGGGACGAACTTGCCGAAAGAATGTTCAGTGATTGGGAGTTGCGTAATCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGAACAATGACATATCAGATGACGTAGATGAGGGTGACTCTACATACATGACCAGTATTGGTGAAGATATTCATTACATAGAGACCTCGAATGAATGGAGTCAATG
GAGGGACGAACTTGCCGAAAGAATGTTCAGTGATTGGGAGTTGCGTAATCAGTAA
Protein sequenceShow/hide protein sequence
MTNNDISDDVDEGDSTYMTSIGEDIHYIETSNEWSQWRDELAERMFSDWELRNQ