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PI0028260 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028260
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionBromodomain-containing protein
Genome locationchr05:19859984..19860284
RNA-Seq ExpressionPI0028260
SyntenyPI0028260
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057383.1 bromodomain-containing protein [Cucumis melo var. makuwa]8.8e-0486.21Show/hide
Query:  EDLAVSSNQCIMVCQLMIKRGAAYLRNNN
        EDLAVSSNQC MVCQL+IKR A YLRNNN
Subjt:  EDLAVSSNQCIMVCQLMIKRGAAYLRNNN
KGN47862.1 hypothetical protein Csa_003465 [Cucumis sativus]1.5e-1169.35Show/hide
Query:  EDLAVSSNQCIMVCQLMIKRGAAYLRNNNWKPK--------RQIKKLRRKLPHIVPLSSLYI
        EDLAVSSNQC +VCQL IKRGAAYLRNN  + K        R +KKLRRKLP+I PLSSLYI
Subjt:  EDLAVSSNQCIMVCQLMIKRGAAYLRNNNWKPK--------RQIKKLRRKLPHIVPLSSLYI
TrEMBL top hitse value%identityAlignment
A0A0A0KHK0 Uncharacterized protein7.2e-1269.35Show/hide
Query:  EDLAVSSNQCIMVCQLMIKRGAAYLRNNNWKPK--------RQIKKLRRKLPHIVPLSSLYI
        EDLAVSSNQC +VCQL IKRGAAYLRNN  + K        R +KKLRRKLP+I PLSSLYI
Subjt:  EDLAVSSNQCIMVCQLMIKRGAAYLRNNNWKPK--------RQIKKLRRKLPHIVPLSSLYI
A0A5D3E3C4 Bromodomain-containing protein4.2e-0486.21Show/hide
Query:  EDLAVSSNQCIMVCQLMIKRGAAYLRNNN
        EDLAVSSNQC MVCQL+IKR A YLRNNN
Subjt:  EDLAVSSNQCIMVCQLMIKRGAAYLRNNN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGAGGATTTAGCTGTTTCCTCCAATCAATGCATAATGGTTTGTCAACTCATGATAAAGAGAGGTGCTGCGTATTTGAGGAACAACAATTGGAAGCCGAAAAGGCA
AATTAAGAAATTGAGGAGGAAGCTTCCTCATATTGTACCCTTGTCTTCACTCTACATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCGAGGATTTAGCTGTTTCCTCCAATCAATGCATAATGGTTTGTCAACTCATGATAAAGAGAGGTGCTGCGTATTTGAGGAACAACAATTGGAAGCCGAAAAGGCA
AATTAAGAAATTGAGGAGGAAGCTTCCTCATATTGTACCCTTGTCTTCACTCTACATTTAG
Protein sequenceShow/hide protein sequence
MFEDLAVSSNQCIMVCQLMIKRGAAYLRNNNWKPKRQIKKLRRKLPHIVPLSSLYI