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PI0028262 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028262
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCentromere protein X
Genome locationchr02:24705195..24706282
RNA-Seq ExpressionPI0028262
SyntenyPI0028262
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0051382 - kinetochore assembly (biological process)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR018552 - Centromere protein X


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057803.1 centromere protein X isoform X2 [Cucumis melo var. makuwa]3.0e-4294.12Show/hide
Query:  MEETGFHPDLIHAIFKLEWSRRSL-REKNENPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIETTHLERVLPQ
        MEETGFHPDLIHAIFKLEWSRRSL REKNENPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKL+QIFISEAVQRAATIAEAEGI RIE THLERVLP 
Subjt:  MEETGFHPDLIHAIFKLEWSRRSL-REKNENPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIETTHLERVLPQ

Query:  LL
         L
Subjt:  LL

TYJ98487.1 centromere protein X isoform X2 [Cucumis melo var. makuwa]3.6e-4393.2Show/hide
Query:  MEETGFHPDLIHAIFKLEWSRRSL-REKNENPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIETTHLERVLPQ
        MEETGFHPDLIHAIFKLEWSRRSL REKNENPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKL+QIFISEAVQRAATIAEAEGI RIE THLERVLPQ
Subjt:  MEETGFHPDLIHAIFKLEWSRRSL-REKNENPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIETTHLERVLPQ

Query:  LLL
        +++
Subjt:  LLL

XP_008464489.1 PREDICTED: centromere protein X isoform X2 [Cucumis melo]2.2e-4596.19Show/hide
Query:  MEETGFHPDLIHAIFKLEWSRRSL-REKNENPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIETTHLERVLPQ
        MEETGFHPDLIHAIFKLEWSRRSL REKNENPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKL+QIFISEAVQRAATIAEAEGI RIE THLERVLPQ
Subjt:  MEETGFHPDLIHAIFKLEWSRRSL-REKNENPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIETTHLERVLPQ

Query:  LLLDF
        LLLDF
Subjt:  LLLDF

XP_031736273.1 protein MHF2 homolog isoform X1 [Cucumis sativus]9.1e-4775.16Show/hide
Query:  LKLAAIGKQDQNAWCGTSRNLKLESSPVST-------PMEETGFHPDLIHAIFKLEWSRRSL-REKNE-NPDAMDCE-------------VDAGAGTSKK
        +KLAAI KQ +    GT RNLKL+S  + T        MEETGFHPDLIHAIFKLEWSRRSL REKNE NPDAMDCE             VDAGAGTSKK
Subjt:  LKLAAIGKQDQNAWCGTSRNLKLESSPVST-------PMEETGFHPDLIHAIFKLEWSRRSL-REKNE-NPDAMDCE-------------VDAGAGTSKK

Query:  SRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIETTHLERVLPQLLLDF
        SRPMSANANALKLSSKL+QIFISEAVQRAATIAEAEGISRIE THLERVLPQLLLDF
Subjt:  SRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIETTHLERVLPQLLLDF

XP_031736274.1 protein MHF2 homolog isoform X2 [Cucumis sativus]1.5e-4981.94Show/hide
Query:  LKLAAIGKQDQNAWCGTSRNLKLESSPVST-------PMEETGFHPDLIHAIFKLEWSRRSL-REKNE-NPDAMDCEVDAGAGTSKKSRPMSANANALKL
        +KLAAI KQ +    GT RNLKL+S  + T        MEETGFHPDLIHAIFKLEWSRRSL REKNE NPDAMDCEVDAGAGTSKKSRPMSANANALKL
Subjt:  LKLAAIGKQDQNAWCGTSRNLKLESSPVST-------PMEETGFHPDLIHAIFKLEWSRRSL-REKNE-NPDAMDCEVDAGAGTSKKSRPMSANANALKL

Query:  SSKLLQIFISEAVQRAATIAEAEGISRIETTHLERVLPQLLLDF
        SSKL+QIFISEAVQRAATIAEAEGISRIE THLERVLPQLLLDF
Subjt:  SSKLLQIFISEAVQRAATIAEAEGISRIETTHLERVLPQLLLDF

TrEMBL top hitse value%identityAlignment
A0A0A0LU58 Uncharacterized protein7.3e-5081.94Show/hide
Query:  LKLAAIGKQDQNAWCGTSRNLKLESSPVST-------PMEETGFHPDLIHAIFKLEWSRRSL-REKNE-NPDAMDCEVDAGAGTSKKSRPMSANANALKL
        +KLAAI KQ +    GT RNLKL+S  + T        MEETGFHPDLIHAIFKLEWSRRSL REKNE NPDAMDCEVDAGAGTSKKSRPMSANANALKL
Subjt:  LKLAAIGKQDQNAWCGTSRNLKLESSPVST-------PMEETGFHPDLIHAIFKLEWSRRSL-REKNE-NPDAMDCEVDAGAGTSKKSRPMSANANALKL

Query:  SSKLLQIFISEAVQRAATIAEAEGISRIETTHLERVLPQLLLDF
        SSKL+QIFISEAVQRAATIAEAEGISRIE THLERVLPQLLLDF
Subjt:  SSKLLQIFISEAVQRAATIAEAEGISRIETTHLERVLPQLLLDF

A0A1S3CLJ8 centromere protein X isoform X15.6e-4291.51Show/hide
Query:  MEETGFHPDLIHAIFKLEWSRRSL-REKNENPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKLLQIFI-SEAVQRAATIAEAEGISRIETTHLERVLP
        MEETGFHPDLIHAIFKLEWSRRSL REKNENPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKL+   I +EAVQRAATIAEAEGI RIE THLERVLP
Subjt:  MEETGFHPDLIHAIFKLEWSRRSL-REKNENPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKLLQIFI-SEAVQRAATIAEAEGISRIETTHLERVLP

Query:  QLLLDF
        QLLLDF
Subjt:  QLLLDF

A0A1S3CLK5 centromere protein X isoform X21.1e-4596.19Show/hide
Query:  MEETGFHPDLIHAIFKLEWSRRSL-REKNENPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIETTHLERVLPQ
        MEETGFHPDLIHAIFKLEWSRRSL REKNENPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKL+QIFISEAVQRAATIAEAEGI RIE THLERVLPQ
Subjt:  MEETGFHPDLIHAIFKLEWSRRSL-REKNENPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIETTHLERVLPQ

Query:  LLLDF
        LLLDF
Subjt:  LLLDF

A0A5A7UPL0 Centromere protein X isoform X21.5e-4294.12Show/hide
Query:  MEETGFHPDLIHAIFKLEWSRRSL-REKNENPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIETTHLERVLPQ
        MEETGFHPDLIHAIFKLEWSRRSL REKNENPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKL+QIFISEAVQRAATIAEAEGI RIE THLERVLP 
Subjt:  MEETGFHPDLIHAIFKLEWSRRSL-REKNENPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIETTHLERVLPQ

Query:  LL
         L
Subjt:  LL

A0A5D3BH88 Centromere protein X isoform X21.7e-4393.2Show/hide
Query:  MEETGFHPDLIHAIFKLEWSRRSL-REKNENPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIETTHLERVLPQ
        MEETGFHPDLIHAIFKLEWSRRSL REKNENPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKL+QIFISEAVQRAATIAEAEGI RIE THLERVLPQ
Subjt:  MEETGFHPDLIHAIFKLEWSRRSL-REKNENPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIETTHLERVLPQ

Query:  LLL
        +++
Subjt:  LLL

SwissProt top hitse value%identityAlignment
A8MT69 Centromere protein X3.4e-0443.1Show/hide
Query:  KSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIETTHLERVLPQLLLDF
        K      + +AL+L  +LL++F+ EA  R    A+AE   R++   LE+VLPQLLLDF
Subjt:  KSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIETTHLERVLPQLLLDF

P0DJH7 Centromere protein X9.6e-0750.98Show/hide
Query:  NANALKLSSKLLQIFISEAVQRAATIAEAEGISRIETTHLERVLPQLLLDF
        N +AL L ++LL++F+ EA  RAA  A+AE + +++  H+E+VLPQLLLDF
Subjt:  NANALKLSSKLLQIFISEAVQRAATIAEAEGISRIETTHLERVLPQLLLDF

Q2NKU0 Centromere protein X6.2e-0644.83Show/hide
Query:  KSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIETTHLERVLPQLLLDF
        K +    + +AL+L ++LL+IF+ EA  R+   A+AEG++ ++   LE+VLPQLLLDF
Subjt:  KSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIETTHLERVLPQLLLDF

Q8C4X1 Centromere protein X3.4e-0447.06Show/hide
Query:  NANALKLSSKLLQIFISEAVQRAATIAEAEGISRIETTHLERVLPQLLLDF
        + +AL+L ++ L+IF+ EA  R    A+AE +  +E   LE+VLPQLLLDF
Subjt:  NANALKLSSKLLQIFISEAVQRAATIAEAEGISRIETTHLERVLPQLLLDF

Q8L7N3 Protein MHF2 homolog1.0e-2466Show/hide
Query:  FHPDLIHAIFKLEWSRRSLREKNENPDAMDC-EVDAGAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIETTHLERVLPQLLLDF
        F  DLIHAIFK  W+RR  RE+ E  DA+D  E +   GT+KK+R  SANANALKLS +LL+ F+SEAVQRAA IAEAEG+ +IE THLER+LPQLLLDF
Subjt:  FHPDLIHAIFKLEWSRRSLREKNENPDAMDC-EVDAGAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIETTHLERVLPQLLLDF

Arabidopsis top hitse value%identityAlignment
AT1G78790.1 unknown protein7.2e-2666Show/hide
Query:  FHPDLIHAIFKLEWSRRSLREKNENPDAMDC-EVDAGAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIETTHLERVLPQLLLDF
        F  DLIHAIFK  W+RR  RE+ E  DA+D  E +   GT+KK+R  SANANALKLS +LL+ F+SEAVQRAA IAEAEG+ +IE THLER+LPQLLLDF
Subjt:  FHPDLIHAIFKLEWSRRSLREKNENPDAMDC-EVDAGAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIETTHLERVLPQLLLDF

AT1G78790.2 unknown protein3.0e-1653Show/hide
Query:  FHPDLIHAIFKLEWSRRSLREKNENPDAMDC-EVDAGAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIETTHLERVLPQLLLDF
        F  DLIHAIFK  W+RR  RE+ E  DA+D  E +   GT+KK+R                    SEAVQRAA IAEAEG+ +IE THLER+LPQLLLDF
Subjt:  FHPDLIHAIFKLEWSRRSLREKNENPDAMDC-EVDAGAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIETTHLERVLPQLLLDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAAAACTAGCGGCAATTGGAAAACAAGATCAAAACGCGTGGTGCGGGACAAGTCGAAATTTGAAACTTGAAAGTTCGCCAGTTTCGACTCCCATGGAAGAGACCGG
ATTTCATCCTGATCTAATTCACGCCATCTTCAAGCTCGAGTGGAGCAGAAGATCACTTCGCGAGAAAAACGAGAATCCGGATGCCATGGATTGTGAGGTTGACGCTGGGG
CTGGAACATCCAAGAAAAGCAGGCCAATGTCAGCTAATGCAAATGCTCTTAAATTGAGCTCTAAACTTCTACAAATTTTTATCTCAGAGGCTGTGCAGCGCGCTGCAACA
ATTGCAGAAGCAGAAGGTATTAGTAGAATTGAAACCACTCATTTGGAGAGAGTTCTTCCACAGTTACTACTGGATTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTAAAACTAGCGGCAATTGGAAAACAAGATCAAAACGCGTGGTGCGGGACAAGTCGAAATTTGAAACTTGAAAGTTCGCCAGTTTCGACTCCCATGGAAGAGACCGG
ATTTCATCCTGATCTAATTCACGCCATCTTCAAGCTCGAGTGGAGCAGAAGATCACTTCGCGAGAAAAACGAGAATCCGGATGCCATGGATTGTGAGGTTGACGCTGGGG
CTGGAACATCCAAGAAAAGCAGGCCAATGTCAGCTAATGCAAATGCTCTTAAATTGAGCTCTAAACTTCTACAAATTTTTATCTCAGAGGCTGTGCAGCGCGCTGCAACA
ATTGCAGAAGCAGAAGGTATTAGTAGAATTGAAACCACTCATTTGGAGAGAGTTCTTCCACAGTTACTACTGGATTTTTGA
Protein sequenceShow/hide protein sequence
MLKLAAIGKQDQNAWCGTSRNLKLESSPVSTPMEETGFHPDLIHAIFKLEWSRRSLREKNENPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAAT
IAEAEGISRIETTHLERVLPQLLLDF