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PI0028300 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028300
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionStructural maintenance of chromosomes protein
Genome locationchr07:15872455..15874127
RNA-Seq ExpressionPI0028300
SyntenyPI0028300
Gene Ontology termsGO:0000819 - sister chromatid segregation (biological process)
GO:0051301 - cell division (biological process)
GO:0051321 - meiotic cell cycle (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005694 - chromosome (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040073.1 structural maintenance of chromosomes protein 3 isoform X1 [Cucumis melo var. makuwa]4.1e-1589.29Show/hide
Query:  DKKITKLLLGQQKLDAKLGHDKSELEQLKQDIGNAQKQKQSISKARLNKEKSLADV
        D+KIT+L+  QQKLDAKLGHDKSELEQLKQDI NAQKQKQSISKARLNKEKSLADV
Subjt:  DKKITKLLLGQQKLDAKLGHDKSELEQLKQDIGNAQKQKQSISKARLNKEKSLADV
XP_008449833.1 PREDICTED: structural maintenance of chromosomes protein 3 isoform X1 [Cucumis melo]4.1e-1589.29Show/hide
Query:  DKKITKLLLGQQKLDAKLGHDKSELEQLKQDIGNAQKQKQSISKARLNKEKSLADV
        D+KIT+L+  QQKLDAKLGHDKSELEQLKQDI NAQKQKQSISKARLNKEKSLADV
Subjt:  DKKITKLLLGQQKLDAKLGHDKSELEQLKQDIGNAQKQKQSISKARLNKEKSLADV
XP_008449838.1 PREDICTED: structural maintenance of chromosomes protein 3 isoform X2 [Cucumis melo]4.1e-1589.29Show/hide
Query:  DKKITKLLLGQQKLDAKLGHDKSELEQLKQDIGNAQKQKQSISKARLNKEKSLADV
        D+KIT+L+  QQKLDAKLGHDKSELEQLKQDI NAQKQKQSISKARLNKEKSLADV
Subjt:  DKKITKLLLGQQKLDAKLGHDKSELEQLKQDIGNAQKQKQSISKARLNKEKSLADV
XP_011653545.1 structural maintenance of chromosomes protein 3 isoform X1 [Cucumis sativus]4.1e-1589.29Show/hide
Query:  DKKITKLLLGQQKLDAKLGHDKSELEQLKQDIGNAQKQKQSISKARLNKEKSLADV
        D+KIT+L+  QQKLDAKLGHDKSELEQLKQDI NAQKQKQSISKARLNKEKSLADV
Subjt:  DKKITKLLLGQQKLDAKLGHDKSELEQLKQDIGNAQKQKQSISKARLNKEKSLADV
XP_031740065.1 structural maintenance of chromosomes protein 3 isoform X2 [Cucumis sativus]4.1e-1589.29Show/hide
Query:  DKKITKLLLGQQKLDAKLGHDKSELEQLKQDIGNAQKQKQSISKARLNKEKSLADV
        D+KIT+L+  QQKLDAKLGHDKSELEQLKQDI NAQKQKQSISKARLNKEKSLADV
Subjt:  DKKITKLLLGQQKLDAKLGHDKSELEQLKQDIGNAQKQKQSISKARLNKEKSLADV
TrEMBL top hitse value%identityAlignment
A0A0A0L0E5 Structural maintenance of chromosomes protein2.0e-1589.29Show/hide
Query:  DKKITKLLLGQQKLDAKLGHDKSELEQLKQDIGNAQKQKQSISKARLNKEKSLADV
        D+KIT+L+  QQKLDAKLGHDKSELEQLKQDI NAQKQKQSISKARLNKEKSLADV
Subjt:  DKKITKLLLGQQKLDAKLGHDKSELEQLKQDIGNAQKQKQSISKARLNKEKSLADV
A0A1S3BMX7 structural maintenance of chromosomes protein 3 isoform X22.0e-1589.29Show/hide
Query:  DKKITKLLLGQQKLDAKLGHDKSELEQLKQDIGNAQKQKQSISKARLNKEKSLADV
        D+KIT+L+  QQKLDAKLGHDKSELEQLKQDI NAQKQKQSISKARLNKEKSLADV
Subjt:  DKKITKLLLGQQKLDAKLGHDKSELEQLKQDIGNAQKQKQSISKARLNKEKSLADV
A0A1S3BNL0 Structural maintenance of chromosomes protein2.0e-1589.29Show/hide
Query:  DKKITKLLLGQQKLDAKLGHDKSELEQLKQDIGNAQKQKQSISKARLNKEKSLADV
        D+KIT+L+  QQKLDAKLGHDKSELEQLKQDI NAQKQKQSISKARLNKEKSLADV
Subjt:  DKKITKLLLGQQKLDAKLGHDKSELEQLKQDIGNAQKQKQSISKARLNKEKSLADV
A0A5A7TAH3 Structural maintenance of chromosomes protein2.0e-1589.29Show/hide
Query:  DKKITKLLLGQQKLDAKLGHDKSELEQLKQDIGNAQKQKQSISKARLNKEKSLADV
        D+KIT+L+  QQKLDAKLGHDKSELEQLKQDI NAQKQKQSISKARLNKEKSLADV
Subjt:  DKKITKLLLGQQKLDAKLGHDKSELEQLKQDIGNAQKQKQSISKARLNKEKSLADV
A0A6J1JE08 Structural maintenance of chromosomes protein1.1e-1383.93Show/hide
Query:  DKKITKLLLGQQKLDAKLGHDKSELEQLKQDIGNAQKQKQSISKARLNKEKSLADV
        D+KIT+L+  QQK+DAK GHDKSELEQLKQDI NAQKQKQSISKA LNKEKSLADV
Subjt:  DKKITKLLLGQQKLDAKLGHDKSELEQLKQDIGNAQKQKQSISKARLNKEKSLADV
SwissProt top hitse value%identityAlignment
Q56YN8 Structural maintenance of chromosomes protein 32.0e-0446.77Show/hide
Query:  RPKPITDKKITKLLLGQQKLDAKLGHDKSELEQLKQDIGNAQKQKQSISKARLNKEKSLADV
        R   + D++IT+L+  QQ+L+A     K ++EQLKQ+I NA KQK +I KA   KEK L D+
Subjt:  RPKPITDKKITKLLLGQQKLDAKLGHDKSELEQLKQDIGNAQKQKQSISKARLNKEKSLADV
Arabidopsis top hitse value%identityAlignment
AT2G27170.1 Structural maintenance of chromosomes (SMC) family protein1.4e-0546.77Show/hide
Query:  RPKPITDKKITKLLLGQQKLDAKLGHDKSELEQLKQDIGNAQKQKQSISKARLNKEKSLADV
        R   + D++IT+L+  QQ+L+A     K ++EQLKQ+I NA KQK +I KA   KEK L D+
Subjt:  RPKPITDKKITKLLLGQQKLDAKLGHDKSELEQLKQDIGNAQKQKQSISKARLNKEKSLADV
AT2G27170.2 Structural maintenance of chromosomes (SMC) family protein1.4e-0546.77Show/hide
Query:  RPKPITDKKITKLLLGQQKLDAKLGHDKSELEQLKQDIGNAQKQKQSISKARLNKEKSLADV
        R   + D++IT+L+  QQ+L+A     K ++EQLKQ+I NA KQK +I KA   KEK L D+
Subjt:  RPKPITDKKITKLLLGQQKLDAKLGHDKSELEQLKQDIGNAQKQKQSISKARLNKEKSLADV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCATGACCAGAGCTTCGCGAAATACTTCATCTGCAGAAGTATACCTCTCTTGCCGCATAACATAATTCGTTCGCCAGCTCACCAAATCAAGCTCCTACTTAAATG
CATGCAACCTCCATCAGCTCGCACCCAGCTCGCAGAACGCATCTCACCTGTTCAGCTCACAACCTTCAGCTTGCCTAAAAATGGTTACCTCAACCGTTCAAGCCCAAGCC
CACGGCCCAAGCCCATTACAGACAAAAAAATTACTAAACTTCTTTTAGGGCAGCAGAAACTTGATGCCAAGTTAGGTCATGATAAATCAGAATTGGAACAGCTTAAGCAG
GACATTGGTAATGCTCAGAAGCAAAAACAATCAATTTCCAAGGCTCGTTTGAATAAGGAAAAATCACTTGCTGACGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTCATGACCAGAGCTTCGCGAAATACTTCATCTGCAGAAGTATACCTCTCTTGCCGCATAACATAATTCGTTCGCCAGCTCACCAAATCAAGCTCCTACTTAAATG
CATGCAACCTCCATCAGCTCGCACCCAGCTCGCAGAACGCATCTCACCTGTTCAGCTCACAACCTTCAGCTTGCCTAAAAATGGTTACCTCAACCGTTCAAGCCCAAGCC
CACGGCCCAAGCCCATTACAGACAAAAAAATTACTAAACTTCTTTTAGGGCAGCAGAAACTTGATGCCAAGTTAGGTCATGATAAATCAGAATTGGAACAGCTTAAGCAG
GACATTGGTAATGCTCAGAAGCAAAAACAATCAATTTCCAAGGCTCGTTTGAATAAGGAAAAATCACTTGCTGACGTTTAG
Protein sequenceShow/hide protein sequence
MLHDQSFAKYFICRSIPLLPHNIIRSPAHQIKLLLKCMQPPSARTQLAERISPVQLTTFSLPKNGYLNRSSPSPRPKPITDKKITKLLLGQQKLDAKLGHDKSELEQLKQ
DIGNAQKQKQSISKARLNKEKSLADV