CuGenDBv2

Gene ID	PI0028317
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	26S protease regulatory subunit 6A homolog
Genome location	chr03:12636748..12638025
RNA-Seq Expression	PI0028317
Synteny	PI0028317
Gene Ontology terms	GO:0043161 - proteasome-mediated ubiquitin-dependent protein catabolic process (biological process) GO:0008540 - proteasome regulatory particle, base subcomplex (cellular component) GO:0000166 - nucleotide binding (molecular function) GO:0016787 - hydrolase activity (molecular function) GO:0036402 - proteasome-activating ATPase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

WP_152952109.1 hypothetical protein, partial [Escherichia coli]

2.8e-05

57.89

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Query:  MVKDTNLEENQLASIITEDIIWASHLLDNEIRILKEEFLWEAKIQAQELKSKEEKGQ
        MV+DTNLEE+QLAS+ T+DI+ AS LLDNEIRILKEE L    ++ +  K K ++ Q
Subjt:  MVKDTNLEENQLASIITEDIIWASHLLDNEIRILKEEFLWEAKIQAQELKSKEEKGQ

XP_004135596.1 26S proteasome regulatory subunit 6A homolog [Cucumis sativus]

3.6e-05

59.65

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Query:  MVKDTNLEENQLASIITEDIIWASHLLDNEIRILKEEFLWEAKIQAQELKSKEEKGQ
        MV+DTNLEE+QLAS+ TEDII AS LLDNEIRILKEE +    ++    K K ++ Q
Subjt:  MVKDTNLEENQLASIITEDIIWASHLLDNEIRILKEEFLWEAKIQAQELKSKEEKGQ

XP_015933548.1 26S protease regulatory subunit 6A homolog [Arachis duranensis]

1.4e-04

54.39

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Query:  MVKDTNLEENQLASIITEDIIWASHLLDNEIRILKEEFLWEAKIQAQELKSKEEKGQ
        MV+DTNLE++QLA++ T+DI+ AS LLDNEIRILKEE L    ++ +  K K ++ Q
Subjt:  MVKDTNLEENQLASIITEDIIWASHLLDNEIRILKEEFLWEAKIQAQELKSKEEKGQ

XP_022136131.1 26S proteasome regulatory subunit 6A homolog [Momordica charantia]

6.2e-05

57.89

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Query:  MVKDTNLEENQLASIITEDIIWASHLLDNEIRILKEEFLWEAKIQAQELKSKEEKGQ
        M +DTNLEE+QLAS+ T+DII AS LLDNEIRILKEEF     ++    K K ++ Q
Subjt:  MVKDTNLEENQLASIITEDIIWASHLLDNEIRILKEEFLWEAKIQAQELKSKEEKGQ

XP_038880104.1 26S proteasome regulatory subunit 6A homolog [Benincasa hispida]

8.0e-05

57.89

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Query:  MVKDTNLEENQLASIITEDIIWASHLLDNEIRILKEEFLWEAKIQAQELKSKEEKGQ
        MV+DTNLEE+QLAS+ T+DII AS LLDNEIRILKEE +    ++    K K ++ Q
Subjt:  MVKDTNLEENQLASIITEDIIWASHLLDNEIRILKEEFLWEAKIQAQELKSKEEKGQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LWD4 AAA domain-containing protein

1.7e-05

59.65

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Query:  MVKDTNLEENQLASIITEDIIWASHLLDNEIRILKEEFLWEAKIQAQELKSKEEKGQ
        MV+DTNLEE+QLAS+ TEDII AS LLDNEIRILKEE +    ++    K K ++ Q
Subjt:  MVKDTNLEENQLASIITEDIIWASHLLDNEIRILKEEFLWEAKIQAQELKSKEEKGQ

A0A1S3BQ90 26S protease regulatory subunit 6A homolog

1.7e-05

59.65

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Query:  MVKDTNLEENQLASIITEDIIWASHLLDNEIRILKEEFLWEAKIQAQELKSKEEKGQ
        MV+DTNLEE+QLAS+ TEDII AS LLDNEIRILKEE +    ++    K K ++ Q
Subjt:  MVKDTNLEENQLASIITEDIIWASHLLDNEIRILKEEFLWEAKIQAQELKSKEEKGQ

A0A5D3CEH3 26S protease regulatory subunit 6A-like protein

1.7e-05

59.65

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Query:  MVKDTNLEENQLASIITEDIIWASHLLDNEIRILKEEFLWEAKIQAQELKSKEEKGQ
        MV+DTNLEE+QLAS+ TEDII AS LLDNEIRILKEE +    ++    K K ++ Q
Subjt:  MVKDTNLEENQLASIITEDIIWASHLLDNEIRILKEEFLWEAKIQAQELKSKEEKGQ

A0A6J1C2N5 26S proteasome regulatory subunit 6A homolog

3.0e-05

57.89

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Query:  MVKDTNLEENQLASIITEDIIWASHLLDNEIRILKEEFLWEAKIQAQELKSKEEKGQ
        M +DTNLEE+QLAS+ T+DII AS LLDNEIRILKEEF     ++    K K ++ Q
Subjt:  MVKDTNLEENQLASIITEDIIWASHLLDNEIRILKEEFLWEAKIQAQELKSKEEKGQ

A0A6P4B402 26S protease regulatory subunit 6A homolog

6.6e-05

54.39

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Query:  MVKDTNLEENQLASIITEDIIWASHLLDNEIRILKEEFLWEAKIQAQELKSKEEKGQ
        MV+DTNLE++QLA++ T+DI+ AS LLDNEIRILKEE L    ++ +  K K ++ Q
Subjt:  MVKDTNLEENQLASIITEDIIWASHLLDNEIRILKEEFLWEAKIQAQELKSKEEKGQ

SwissProt top hits

e value

%identity

Alignment

O23894 26S proteasome regulatory subunit 6A homolog

4.1e-04

48.28

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Query:  MVKDT-NLEENQLASIITEDIIWASHLLDNEIRILKEEFLWEAKIQAQELKSKEEKGQ
        MV+DT + EE+QLAS+ TEDI+ A+ LL+NEIRILKE+      ++    K K ++ Q
Subjt:  MVKDT-NLEENQLASIITEDIIWASHLLDNEIRILKEEFLWEAKIQAQELKSKEEKGQ

P54776 26S proteasome regulatory subunit 6A homolog

2.2e-05

49.12

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Query:  MVKDTNLEENQLASIITEDIIWASHLLDNEIRILKEEFLWEAKIQAQELKSKEEKGQ
        M +D+N E++QL ++ TEDII AS LLDNEIRI+KEE L    ++    K K ++ Q
Subjt:  MVKDTNLEENQLASIITEDIIWASHLLDNEIRILKEEFLWEAKIQAQELKSKEEKGQ

Q9SEI2 26S proteasome regulatory subunit 6A homolog A

4.1e-04

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Query:  MVKDT-NLEENQLASIITEDIIWASHLLDNEIRILKEEFLWEAKIQAQELKSKEEKGQ
        MV+DT + EE+QLAS+ TEDI  A+ LLDNEIRILKE+      ++    K K ++ Q
Subjt:  MVKDT-NLEENQLASIITEDIIWASHLLDNEIRILKEEFLWEAKIQAQELKSKEEKGQ

Arabidopsis top hits

e value

%identity

Alignment

AT1G09100.1 26S proteasome AAA-ATPase subunit RPT5B

1.5e-04

47.37

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Query:  MVKDTNLEENQLASIITEDIIWASHLLDNEIRILKEEFLWEAKIQAQELKSKEEKGQ
        M +DT+ E +QLAS+ T+DI  AS LL NEIRILKEE      +  + +K K ++ Q
Subjt:  MVKDTNLEENQLASIITEDIIWASHLLDNEIRILKEEFLWEAKIQAQELKSKEEKGQ

AT3G05530.1 regulatory particle triple-A ATPase 5A

2.9e-05

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Query:  MVKDT-NLEENQLASIITEDIIWASHLLDNEIRILKEEFLWEAKIQAQELKSKEEKGQ
        MV+DT + EE+QLAS+ TEDI  A+ LLDNEIRILKE+      ++    K K ++ Q
Subjt:  MVKDT-NLEENQLASIITEDIIWASHLLDNEIRILKEEFLWEAKIQAQELKSKEEKGQ

Sequences

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CDS sequence

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ATGGTCAAAGATACGAACCTCGAAGAAAACCAGCTGGCTTCCATTATCACAGAAGACATCATTTGGGCTTCTCATCTTCTTGACAACGAGATTCGGATCCTCAAGGAGGA
ATTTCTATGGGAGGCTAAAATTCAGGCACAAGAATTGAAGAGTAAAGAGGAGAAGGGTCAATGTTGCCATGTTGTCCAACATGCAGGGCGTCGTGTACCAGGTACACGAC
TTCGTCGTTTTAAAACCCTAGCCGCCCGAGCTCCTCCTTTCCATTTTGGTTTAAAAAAATCTCCATTTCCATAA

mRNA sequence

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Protein sequence

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MVKDTNLEENQLASIITEDIIWASHLLDNEIRILKEEFLWEAKIQAQELKSKEEKGQCCHVVQHAGRRVPGTRLRRFKTLAARAPPFHFGLKKSPFP

PI0028317 (gene) of Melon (PI 482460) v1 genome