; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0028351 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028351
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr10:5352690..5353339
RNA-Seq ExpressionPI0028351
SyntenyPI0028351
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041618.1 hypothetical protein E6C27_scaffold93G00910 [Cucumis melo var. makuwa]3.0e-7874.35Show/hide
Query:  MVYFTKHFLSGNRHLTILTDKNQLREDGLSLLVEKSLTGSFLD----------LPKLSVEIPLSQGKNAWVLQSSIHDEAPNANRVLTLGHRIIEDQTRW
        MVYFT+ FLSG RHL IL+D+NQ REDGLSL+VEK   G+F D          LP+LSVE+PLS+GK+AWVLQSSIH+EAPN+ R LTLG R+IE QTRW
Subjt:  MVYFTKHFLSGNRHLTILTDKNQLREDGLSLLVEKSLTGSFLD----------LPKLSVEIPLSQGKNAWVLQSSIHDEAPNANRVLTLGHRIIEDQTRW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGEVSISLWDLWSFGGLPIR
        G VTKVPGEFCFTDCYWEWLE VVGR+  +LY   L+  VTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGE+SISLWDLWSF GLPI+
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGEVSISLWDLWSFGGLPIR

KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]5.0e-8176.44Show/hide
Query:  MVYFTKHFLSGNRHLTILTDKNQLREDGLSLLVEKSLTGSFLD----------LPKLSVEIPLSQGKNAWVLQSSIHDEAPNANRVLTLGHRIIEDQTRW
        MVYFT+ FLSG RHL IL+D+NQ REDGLSL+VEK   G+F D          LP+LSVE+PLS+GK+AWVLQSSIH+EAPN+ R LTLG R+IE QTRW
Subjt:  MVYFTKHFLSGNRHLTILTDKNQLREDGLSLLVEKSLTGSFLD----------LPKLSVEIPLSQGKNAWVLQSSIHDEAPNANRVLTLGHRIIEDQTRW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGEVSISLWDLWSFGGLPIR
        G VTKVPGEFCFTDCYWEWLE VVGR+  +LY  RL+GAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGE+SISLWDLWSFGGLPI+
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGEVSISLWDLWSFGGLPIR

KAA0065375.1 hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa]7.3e-8075.92Show/hide
Query:  MVYFTKHFLSGNRHLTILTDKNQLREDGLSLLVEKSLTGSFLD----------LPKLSVEIPLSQGKNAWVLQSSIHDEAPNANRVLTLGHRIIEDQTRW
        MVYFT+ FLSG RHL IL+D+NQ REDGLSL+VEK   G+F D          LP+LSVEIPLS+GK+AW+LQSSIH EAPN+ R LTLG R+IE QTRW
Subjt:  MVYFTKHFLSGNRHLTILTDKNQLREDGLSLLVEKSLTGSFLD----------LPKLSVEIPLSQGKNAWVLQSSIHDEAPNANRVLTLGHRIIEDQTRW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGEVSISLWDLWSFGGLPIR
        G VTKVP EFCFTDCYWEWLE VVGR+  +LY  RL+GAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGE+SISLWDLWSFGGLPI+
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGEVSISLWDLWSFGGLPIR

TYK02261.1 hypothetical protein E5676_scaffold18G00620 [Cucumis melo var. makuwa]8.9e-7873.3Show/hide
Query:  MVYFTKHFLSGNRHLTILTDKNQLREDGLSLLVEKSLTGSFLD----------LPKLSVEIPLSQGKNAWVLQSSIHDEAPNANRVLTLGHRIIEDQTRW
        MVYFT+ FLSG RHL IL+D+NQLREDGLSL+VEK   G+F D          LP+L VE+PLS+ K+AWVLQSSIH+EAPN+ R LTLG R+IE QTRW
Subjt:  MVYFTKHFLSGNRHLTILTDKNQLREDGLSLLVEKSLTGSFLD----------LPKLSVEIPLSQGKNAWVLQSSIHDEAPNANRVLTLGHRIIEDQTRW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGEVSISLWDLWSFGGLPIR
        G V KVPGEFCFTDCYWEWLE VVG++  +LY   L+G VTASLYTYDRN DVVRAFCEAWCPSTNTLHTMAGE+SISLWDLWSFGGLPI+
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGEVSISLWDLWSFGGLPIR

TYK19639.1 hypothetical protein E5676_scaffold242G00260 [Cucumis melo var. makuwa]3.0e-7874.35Show/hide
Query:  MVYFTKHFLSGNRHLTILTDKNQLREDGLSLLVEKSLTGSFLD----------LPKLSVEIPLSQGKNAWVLQSSIHDEAPNANRVLTLGHRIIEDQTRW
        MVYFT+ FLSG RHL IL+D+NQ REDGLSL+VEK   G+F D          LP+LSVE+PLS+GK+AWVLQSSIH+EAPN+ R LTLG R+IE QTRW
Subjt:  MVYFTKHFLSGNRHLTILTDKNQLREDGLSLLVEKSLTGSFLD----------LPKLSVEIPLSQGKNAWVLQSSIHDEAPNANRVLTLGHRIIEDQTRW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGEVSISLWDLWSFGGLPIR
        G VTKVPGEFCFTDCYWEWLE VVGR+  +LY   L+  VTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGE+SISLWDLWSF GLPI+
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGEVSISLWDLWSFGGLPIR

TrEMBL top hitse value%identityAlignment
A0A5A7TFC8 PMD domain-containing protein1.5e-7874.35Show/hide
Query:  MVYFTKHFLSGNRHLTILTDKNQLREDGLSLLVEKSLTGSFLD----------LPKLSVEIPLSQGKNAWVLQSSIHDEAPNANRVLTLGHRIIEDQTRW
        MVYFT+ FLSG RHL IL+D+NQ REDGLSL+VEK   G+F D          LP+LSVE+PLS+GK+AWVLQSSIH+EAPN+ R LTLG R+IE QTRW
Subjt:  MVYFTKHFLSGNRHLTILTDKNQLREDGLSLLVEKSLTGSFLD----------LPKLSVEIPLSQGKNAWVLQSSIHDEAPNANRVLTLGHRIIEDQTRW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGEVSISLWDLWSFGGLPIR
        G VTKVPGEFCFTDCYWEWLE VVGR+  +LY   L+  VTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGE+SISLWDLWSF GLPI+
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGEVSISLWDLWSFGGLPIR

A0A5A7TX42 Uncharacterized protein2.4e-8176.44Show/hide
Query:  MVYFTKHFLSGNRHLTILTDKNQLREDGLSLLVEKSLTGSFLD----------LPKLSVEIPLSQGKNAWVLQSSIHDEAPNANRVLTLGHRIIEDQTRW
        MVYFT+ FLSG RHL IL+D+NQ REDGLSL+VEK   G+F D          LP+LSVE+PLS+GK+AWVLQSSIH+EAPN+ R LTLG R+IE QTRW
Subjt:  MVYFTKHFLSGNRHLTILTDKNQLREDGLSLLVEKSLTGSFLD----------LPKLSVEIPLSQGKNAWVLQSSIHDEAPNANRVLTLGHRIIEDQTRW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGEVSISLWDLWSFGGLPIR
        G VTKVPGEFCFTDCYWEWLE VVGR+  +LY  RL+GAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGE+SISLWDLWSFGGLPI+
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGEVSISLWDLWSFGGLPIR

A0A5A7V4F4 PMD domain-containing protein4.3e-7873.3Show/hide
Query:  MVYFTKHFLSGNRHLTILTDKNQLREDGLSLLVEKSLTGSFLD----------LPKLSVEIPLSQGKNAWVLQSSIHDEAPNANRVLTLGHRIIEDQTRW
        MVYFT+ FLSG RHL IL+D+NQLREDGLSL+VEK   G+F D          LP+L VE+PLS+ K+AWVLQSSIH+EAPN+ R LTLG R+IE QTRW
Subjt:  MVYFTKHFLSGNRHLTILTDKNQLREDGLSLLVEKSLTGSFLD----------LPKLSVEIPLSQGKNAWVLQSSIHDEAPNANRVLTLGHRIIEDQTRW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGEVSISLWDLWSFGGLPIR
        G V KVPGEFCFTDCYWEWLE VVG++  +LY   L+G VTASLYTYDRN DVVRAFCEAWCPSTNTLHTMAGE+SISLWDLWSFGGLPI+
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGEVSISLWDLWSFGGLPIR

A0A5A7VHW8 PMD domain-containing protein3.5e-8075.92Show/hide
Query:  MVYFTKHFLSGNRHLTILTDKNQLREDGLSLLVEKSLTGSFLD----------LPKLSVEIPLSQGKNAWVLQSSIHDEAPNANRVLTLGHRIIEDQTRW
        MVYFT+ FLSG RHL IL+D+NQ REDGLSL+VEK   G+F D          LP+LSVEIPLS+GK+AW+LQSSIH EAPN+ R LTLG R+IE QTRW
Subjt:  MVYFTKHFLSGNRHLTILTDKNQLREDGLSLLVEKSLTGSFLD----------LPKLSVEIPLSQGKNAWVLQSSIHDEAPNANRVLTLGHRIIEDQTRW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGEVSISLWDLWSFGGLPIR
        G VTKVP EFCFTDCYWEWLE VVGR+  +LY  RL+GAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGE+SISLWDLWSFGGLPI+
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGEVSISLWDLWSFGGLPIR

A0A5D3D7V4 PMD domain-containing protein1.5e-7874.35Show/hide
Query:  MVYFTKHFLSGNRHLTILTDKNQLREDGLSLLVEKSLTGSFLD----------LPKLSVEIPLSQGKNAWVLQSSIHDEAPNANRVLTLGHRIIEDQTRW
        MVYFT+ FLSG RHL IL+D+NQ REDGLSL+VEK   G+F D          LP+LSVE+PLS+GK+AWVLQSSIH+EAPN+ R LTLG R+IE QTRW
Subjt:  MVYFTKHFLSGNRHLTILTDKNQLREDGLSLLVEKSLTGSFLD----------LPKLSVEIPLSQGKNAWVLQSSIHDEAPNANRVLTLGHRIIEDQTRW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGEVSISLWDLWSFGGLPIR
        G VTKVPGEFCFTDCYWEWLE VVGR+  +LY   L+  VTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGE+SISLWDLWSF GLPI+
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGEVSISLWDLWSFGGLPIR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G50750.1 Plant mobile domain protein family2.8e-0534.48Show/hide
Query:  DARLFGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGEVSISLWDLWSFGGLPI
        +A +F AV AS+Y   +N D++    E WCP T T     GE +++L D+    G  +
Subjt:  DARLFGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGEVSISLWDLWSFGGLPI

AT1G50770.1 Aminotransferase-like, plant mobile domain family protein6.3e-0538.6Show/hide
Query:  ARLFGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGEVSISLWDLWSFGGLPI
        A +F AVTAS Y  + N+++V    E WCP T T     GE +I+L D+    G  +
Subjt:  ARLFGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGEVSISLWDLWSFGGLPI

AT1G50790.1 Plant mobile domain protein family1.6e-0538.6Show/hide
Query:  ARLFGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGEVSISLWDLWSFGGLPI
        A +F A+ AS Y   +N+D+V    E WCP TNT     GE +I+L D+    G  +
Subjt:  ARLFGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGEVSISLWDLWSFGGLPI

AT1G50820.1 Aminotransferase-like, plant mobile domain family protein1.1e-0438.71Show/hide
Query:  ARLFGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGEVSISLWDL-----WSFGGLPI
        A +F AV AS Y   +++D+V    E WCP T T     GE +I+L D+     +S  GLP+
Subjt:  ARLFGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGEVSISLWDL-----WSFGGLPI

AT4G16050.1 Aminotransferase-like, plant mobile domain family protein5.3e-0429.69Show/hide
Query:  WLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGEVSISLWDL
        W++ +V         + +F A+ AS Y   +N  ++ +  + WCP TNT     GE +I+L D+
Subjt:  WLEFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGEVSISLWDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTACTTCACCAAACACTTCTTATCTGGAAATAGGCACCTTACAATCCTTACTGATAAGAATCAACTAAGAGAAGATGGTCTCAGTCTCCTTGTAGAGAAGTCGTT
GACGGGTTCTTTTCTCGATCTTCCCAAACTATCTGTCGAGATACCTTTGTCTCAGGGAAAAAATGCATGGGTCCTGCAATCTTCTATCCATGATGAGGCTCCTAATGCCA
ATCGAGTTCTCACTCTCGGACATCGTATAATTGAAGACCAAACCCGTTGGGGTGCCGTGACTAAAGTCCCAGGAGAATTCTGCTTTACTGACTGTTATTGGGAGTGGCTA
GAGTTTGTAGTTGGTCGAAGTGGGGGAATTCTCTACGATGCTCGTTTATTCGGTGCCGTAACAGCTTCTTTGTACACATATGATCGTAACAGCGATGTGGTTCGAGCATT
TTGTGAAGCTTGGTGTCCTTCAACTAATACTCTCCATACCATGGCAGGCGAGGTGTCCATTTCCTTATGGGACCTGTGGTCATTTGGGGGTCTTCCAATAAGGGAAATTT
CTATGAGGAAGACATCCCTTCATTTAAAGAATTGGTCTCATCGCGTGATAAGGCTAAATGTCTCCCGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTACTTCACCAAACACTTCTTATCTGGAAATAGGCACCTTACAATCCTTACTGATAAGAATCAACTAAGAGAAGATGGTCTCAGTCTCCTTGTAGAGAAGTCGTT
GACGGGTTCTTTTCTCGATCTTCCCAAACTATCTGTCGAGATACCTTTGTCTCAGGGAAAAAATGCATGGGTCCTGCAATCTTCTATCCATGATGAGGCTCCTAATGCCA
ATCGAGTTCTCACTCTCGGACATCGTATAATTGAAGACCAAACCCGTTGGGGTGCCGTGACTAAAGTCCCAGGAGAATTCTGCTTTACTGACTGTTATTGGGAGTGGCTA
GAGTTTGTAGTTGGTCGAAGTGGGGGAATTCTCTACGATGCTCGTTTATTCGGTGCCGTAACAGCTTCTTTGTACACATATGATCGTAACAGCGATGTGGTTCGAGCATT
TTGTGAAGCTTGGTGTCCTTCAACTAATACTCTCCATACCATGGCAGGCGAGGTGTCCATTTCCTTATGGGACCTGTGGTCATTTGGGGGTCTTCCAATAAGGGAAATTT
CTATGAGGAAGACATCCCTTCATTTAAAGAATTGGTCTCATCGCGTGATAAGGCTAAATGTCTCCCGATAA
Protein sequenceShow/hide protein sequence
MVYFTKHFLSGNRHLTILTDKNQLREDGLSLLVEKSLTGSFLDLPKLSVEIPLSQGKNAWVLQSSIHDEAPNANRVLTLGHRIIEDQTRWGAVTKVPGEFCFTDCYWEWL
EFVVGRSGGILYDARLFGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGEVSISLWDLWSFGGLPIREISMRKTSLHLKNWSHRVIRLNVSR