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PI0028367 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028367
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr11:11506441..11510386
RNA-Seq ExpressionPI0028367
SyntenyPI0028367
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036767.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]3.8e-7251.63Show/hide
Query:  STERYMFDLLQPDQIIWEPYKAVMDSLLNFCTNGHDIWQT------------------------------------------------------------
        S  RYMFDLLQP QI+WEPYK V+DSL +FCTNGH+IW+T                                                            
Subjt:  STERYMFDLLQPDQIIWEPYKAVMDSLLNFCTNGHDIWQT------------------------------------------------------------

Query:  ---------------------------------------------RSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPD
                                                     RSNN RLR+VADDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  VQEPD
Subjt:  ---------------------------------------------RSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPD

Query:  ELEEVEQHVQEVPPVRQTQSGTGDVSPMMMMPAFETGYYDSRVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLVTDPSSSYMHGHGRGHGEHNEYLYYEPP
        +LEEV+QH +EVPP+ QTQS    VSP+MMMP F T YYDS VGQSSDFG GYYNS+AG SS++FGQ YYDL +DPSSSYMHGHGRG G+HNEYLYYE P
Subjt:  ELEEVEQHVQEVPPVRQTQSGTGDVSPMMMMPAFETGYYDSRVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLVTDPSSSYMHGHGRGHGEHNEYLYYEPP

Query:  AAVPEQ
        AAVPEQ
Subjt:  AAVPEQ

KAA0051233.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.9e-7256.52Show/hide
Query:  MFDLLQPDQIIWEPYKAVMDSLLNFCTNGHDIWQT-----------------------------------------------------------------
        MFDLLQP QI+WEPYK  +DSL +FCTNGHDIWQT                                                                 
Subjt:  MFDLLQPDQIIWEPYKAVMDSLLNFCTNGHDIWQT-----------------------------------------------------------------

Query:  -------------RSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPV--RQTQSGTGDVSPMMM
                     RSNN RLR+VADDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  VQEPD+LEEV+QH +EVPP+   QTQS    VSP+MM
Subjt:  -------------RSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPV--RQTQSGTGDVSPMMM

Query:  MPAFETGYYDSRVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLVTDPSSSYMHGHGRGHGEHNEYLYYEPPAAVPEQ
        MP F T YYDS VGQSSDFG GYYNSEAG SS++FGQ YYDL +DPSSSYMH HGRG GEHNEYLYYE PAAVP+Q
Subjt:  MPAFETGYYDSRVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLVTDPSSSYMHGHGRGHGEHNEYLYYEPPAAVPEQ

KAA0055624.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.6e-7556.99Show/hide
Query:  STERYMFDLLQPDQIIWEPYKAVMDSLLNFCTNGHDIWQT------------------------------------------------------------
        S  RYMFDLLQP QI+WEPYK V+DSL +FCTNGH+IW+T                                                            
Subjt:  STERYMFDLLQPDQIIWEPYKAVMDSLLNFCTNGHDIWQT------------------------------------------------------------

Query:  ------------------RSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQTQSGTGDVSP
                          RSNN RL +VADDPQQVL+ICNNNE+YMENIHYMYDVPIVPAPVQRRR  VQEPD+LEEV+QH +EVPP+ QT+S    VSP
Subjt:  ------------------RSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQTQSGTGDVSP

Query:  MMMMPAFETGYYDSRVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLVTDPSSSYMHGHGRGHGEHNEYLYYEPPAAVPEQ
        +MMMP F T YYDS VGQSSDFG GYYNSEAG SS++FGQ YYDL +DPSSSYMHGHGRG GEHNEYLYYE PAAVPEQ
Subjt:  MMMMPAFETGYYDSRVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLVTDPSSSYMHGHGRGHGEHNEYLYYEPPAAVPEQ

KAA0067080.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.0e-7352.29Show/hide
Query:  STERYMFDLLQPDQIIWEPYKAVMDSLLNFCTNGHDIWQT------------------------------------------------------------
        S  RYMFDLLQP QI+WEPYK V+DSL +FCTNGH+IW+T                                                            
Subjt:  STERYMFDLLQPDQIIWEPYKAVMDSLLNFCTNGHDIWQT------------------------------------------------------------

Query:  ---------------------------------------------RSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPD
                                                     RSNN RLR+VADDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  VQEPD
Subjt:  ---------------------------------------------RSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPD

Query:  ELEEVEQHVQEVPPVRQTQSGTGDVSPMMMMPAFETGYYDSRVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLVTDPSSSYMHGHGRGHGEHNEYLYYEPP
        +LEEV+QH +EVPP+ QTQS    VSP+MMMP F T YYDS VGQSSDFG GYYNSEAG SS++FGQ YYDL +DPSSSYMHGHGRG GEHNEYLYYE P
Subjt:  ELEEVEQHVQEVPPVRQTQSGTGDVSPMMMMPAFETGYYDSRVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLVTDPSSSYMHGHGRGHGEHNEYLYYEPP

Query:  AAVPEQ
        AAVPEQ
Subjt:  AAVPEQ

TYK18891.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]4.5e-7356.88Show/hide
Query:  MFDLLQPDQIIWEPYKAVMDSLLNFCTNGHDIWQT-----------------------------------------------------------------
        MFDLLQP QI+WEPYK  +DSL +FCTNGHDIW+T                                                                 
Subjt:  MFDLLQPDQIIWEPYKAVMDSLLNFCTNGHDIWQT-----------------------------------------------------------------

Query:  -------------RSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPV--RQTQSGTGDVSPMMM
                     RSNN RLR+VADDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  VQEPD+LEEV+QH +EVPP+   QTQS    VSP+MM
Subjt:  -------------RSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPV--RQTQSGTGDVSPMMM

Query:  MPAFETGYYDSRVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLVTDPSSSYMHGHGRGHGEHNEYLYYEPPAAVPEQ
        MP F T YYDS VGQSSDFG GYYNSEAG SS++FGQ YYDL +DPSSSYMHGHGRG GEHNEYLYYE PAAVPEQ
Subjt:  MPAFETGYYDSRVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLVTDPSSSYMHGHGRGHGEHNEYLYYEPPAAVPEQ

TrEMBL top hitse value%identityAlignment
A0A5A7U5S8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.4e-7256.52Show/hide
Query:  MFDLLQPDQIIWEPYKAVMDSLLNFCTNGHDIWQT-----------------------------------------------------------------
        MFDLLQP QI+WEPYK  +DSL +FCTNGHDIWQT                                                                 
Subjt:  MFDLLQPDQIIWEPYKAVMDSLLNFCTNGHDIWQT-----------------------------------------------------------------

Query:  -------------RSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPV--RQTQSGTGDVSPMMM
                     RSNN RLR+VADDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  VQEPD+LEEV+QH +EVPP+   QTQS    VSP+MM
Subjt:  -------------RSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPV--RQTQSGTGDVSPMMM

Query:  MPAFETGYYDSRVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLVTDPSSSYMHGHGRGHGEHNEYLYYEPPAAVPEQ
        MP F T YYDS VGQSSDFG GYYNSEAG SS++FGQ YYDL +DPSSSYMH HGRG GEHNEYLYYE PAAVP+Q
Subjt:  MPAFETGYYDSRVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLVTDPSSSYMHGHGRGHGEHNEYLYYEPPAAVPEQ

A0A5A7UKC7 Serine/threonine-protein phosphatase 7 long form-like protein7.9e-7656.99Show/hide
Query:  STERYMFDLLQPDQIIWEPYKAVMDSLLNFCTNGHDIWQT------------------------------------------------------------
        S  RYMFDLLQP QI+WEPYK V+DSL +FCTNGH+IW+T                                                            
Subjt:  STERYMFDLLQPDQIIWEPYKAVMDSLLNFCTNGHDIWQT------------------------------------------------------------

Query:  ------------------RSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQTQSGTGDVSP
                          RSNN RL +VADDPQQVL+ICNNNE+YMENIHYMYDVPIVPAPVQRRR  VQEPD+LEEV+QH +EVPP+ QT+S    VSP
Subjt:  ------------------RSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQTQSGTGDVSP

Query:  MMMMPAFETGYYDSRVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLVTDPSSSYMHGHGRGHGEHNEYLYYEPPAAVPEQ
        +MMMP F T YYDS VGQSSDFG GYYNSEAG SS++FGQ YYDL +DPSSSYMHGHGRG GEHNEYLYYE PAAVPEQ
Subjt:  MMMMPAFETGYYDSRVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLVTDPSSSYMHGHGRGHGEHNEYLYYEPPAAVPEQ

A0A5A7VIP6 Mediator of RNA polymerase II transcription subunit 12-like isoform X19.7e-7452.29Show/hide
Query:  STERYMFDLLQPDQIIWEPYKAVMDSLLNFCTNGHDIWQT------------------------------------------------------------
        S  RYMFDLLQP QI+WEPYK V+DSL +FCTNGH+IW+T                                                            
Subjt:  STERYMFDLLQPDQIIWEPYKAVMDSLLNFCTNGHDIWQT------------------------------------------------------------

Query:  ---------------------------------------------RSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPD
                                                     RSNN RLR+VADDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  VQEPD
Subjt:  ---------------------------------------------RSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPD

Query:  ELEEVEQHVQEVPPVRQTQSGTGDVSPMMMMPAFETGYYDSRVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLVTDPSSSYMHGHGRGHGEHNEYLYYEPP
        +LEEV+QH +EVPP+ QTQS    VSP+MMMP F T YYDS VGQSSDFG GYYNSEAG SS++FGQ YYDL +DPSSSYMHGHGRG GEHNEYLYYE P
Subjt:  ELEEVEQHVQEVPPVRQTQSGTGDVSPMMMMPAFETGYYDSRVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLVTDPSSSYMHGHGRGHGEHNEYLYYEPP

Query:  AAVPEQ
        AAVPEQ
Subjt:  AAVPEQ

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein1.8e-7251.63Show/hide
Query:  STERYMFDLLQPDQIIWEPYKAVMDSLLNFCTNGHDIWQT------------------------------------------------------------
        S  RYMFDLLQP QI+WEPYK V+DSL +FCTNGH+IW+T                                                            
Subjt:  STERYMFDLLQPDQIIWEPYKAVMDSLLNFCTNGHDIWQT------------------------------------------------------------

Query:  ---------------------------------------------RSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPD
                                                     RSNN RLR+VADDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  VQEPD
Subjt:  ---------------------------------------------RSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPD

Query:  ELEEVEQHVQEVPPVRQTQSGTGDVSPMMMMPAFETGYYDSRVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLVTDPSSSYMHGHGRGHGEHNEYLYYEPP
        +LEEV+QH +EVPP+ QTQS    VSP+MMMP F T YYDS VGQSSDFG GYYNS+AG SS++FGQ YYDL +DPSSSYMHGHGRG G+HNEYLYYE P
Subjt:  ELEEVEQHVQEVPPVRQTQSGTGDVSPMMMMPAFETGYYDSRVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLVTDPSSSYMHGHGRGHGEHNEYLYYEPP

Query:  AAVPEQ
        AAVPEQ
Subjt:  AAVPEQ

A0A5D3D5R5 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.2e-7356.88Show/hide
Query:  MFDLLQPDQIIWEPYKAVMDSLLNFCTNGHDIWQT-----------------------------------------------------------------
        MFDLLQP QI+WEPYK  +DSL +FCTNGHDIW+T                                                                 
Subjt:  MFDLLQPDQIIWEPYKAVMDSLLNFCTNGHDIWQT-----------------------------------------------------------------

Query:  -------------RSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPV--RQTQSGTGDVSPMMM
                     RSNN RLR+VADDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  VQEPD+LEEV+QH +EVPP+   QTQS    VSP+MM
Subjt:  -------------RSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPV--RQTQSGTGDVSPMMM

Query:  MPAFETGYYDSRVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLVTDPSSSYMHGHGRGHGEHNEYLYYEPPAAVPEQ
        MP F T YYDS VGQSSDFG GYYNSEAG SS++FGQ YYDL +DPSSSYMHGHGRG GEHNEYLYYE PAAVPEQ
Subjt:  MPAFETGYYDSRVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLVTDPSSSYMHGHGRGHGEHNEYLYYEPPAAVPEQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGTCTTACATCCAGATCCATGGTTGTTGAGGAAACCAGGCAGACCAAAGAGTTCACGCTATCACAACGAGATGGATTGGGCAGAACCAAGTGCTCAACAACGATG
CTCGTTTTGTGGTCAACTTGGTCACAACCGACGAAAGATTTCAAGCGAACAAAGGATTTCAGGCGAGGAACCCTACGCGAAGAAGTTGCAGTCCTGCTTGGCAGGCGGCG
AAAGAGATAGAGATATTTCCTTCACCGAACTTATCCTTAGCATATTACTCAGAAATGACGAAATATGTGGCGGAAGCACCGAGAGGTACATGTTTGATCTTCTTCAACCT
GATCAGATTATCTGGGAGCCGTACAAAGCTGTCATGGATAGTTTGCTGAATTTCTGTACGAACGGTCACGACATATGGCAGACGAGGTCGAACAATAGTAGACTTCGGGA
TGTTGCAGATGATCCACAGCAGGTCCTAGATATATGCAACAATAACGAGCGGTACATGGAGAACATACACTATATGTACGATGTACCTATTGTACCTGCACCAGTTCAAA
GGAGACGTGCTCGAGTGCAAGAGCCTGATGAATTGGAAGAAGTTGAACAACATGTGCAAGAAGTGCCTCCTGTGAGACAAACACAAAGCGGGACTGGTGACGTTAGTCCA
ATGATGATGATGCCGGCATTTGAAACGGGATATTATGATTCAAGAGTCGGTCAATCGTCAGACTTCGGGACAGGATATTATAATTCAGAGGCAGGTCCATCATCTTCAAA
CTTTGGACAAGGATACTACGATTTAGTGACCGATCCATCATCTTCATACATGCATGGACATGGGCGTGGTCATGGAGAACATAACGAATATTTGTACTACGAACCGCCTG
CAGCGGTACCCGAGCAACCAATGAGCAACAACAACAAGAGAATCAGGAGGGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTGTCTTACATCCAGATCCATGGTTGTTGAGGAAACCAGGCAGACCAAAGAGTTCACGCTATCACAACGAGATGGATTGGGCAGAACCAAGTGCTCAACAACGATG
CTCGTTTTGTGGTCAACTTGGTCACAACCGACGAAAGATTTCAAGCGAACAAAGGATTTCAGGCGAGGAACCCTACGCGAAGAAGTTGCAGTCCTGCTTGGCAGGCGGCG
AAAGAGATAGAGATATTTCCTTCACCGAACTTATCCTTAGCATATTACTCAGAAATGACGAAATATGTGGCGGAAGCACCGAGAGGTACATGTTTGATCTTCTTCAACCT
GATCAGATTATCTGGGAGCCGTACAAAGCTGTCATGGATAGTTTGCTGAATTTCTGTACGAACGGTCACGACATATGGCAGACGAGGTCGAACAATAGTAGACTTCGGGA
TGTTGCAGATGATCCACAGCAGGTCCTAGATATATGCAACAATAACGAGCGGTACATGGAGAACATACACTATATGTACGATGTACCTATTGTACCTGCACCAGTTCAAA
GGAGACGTGCTCGAGTGCAAGAGCCTGATGAATTGGAAGAAGTTGAACAACATGTGCAAGAAGTGCCTCCTGTGAGACAAACACAAAGCGGGACTGGTGACGTTAGTCCA
ATGATGATGATGCCGGCATTTGAAACGGGATATTATGATTCAAGAGTCGGTCAATCGTCAGACTTCGGGACAGGATATTATAATTCAGAGGCAGGTCCATCATCTTCAAA
CTTTGGACAAGGATACTACGATTTAGTGACCGATCCATCATCTTCATACATGCATGGACATGGGCGTGGTCATGGAGAACATAACGAATATTTGTACTACGAACCGCCTG
CAGCGGTACCCGAGCAACCAATGAGCAACAACAACAAGAGAATCAGGAGGGACTAG
Protein sequenceShow/hide protein sequence
MPVLHPDPWLLRKPGRPKSSRYHNEMDWAEPSAQQRCSFCGQLGHNRRKISSEQRISGEEPYAKKLQSCLAGGERDRDISFTELILSILLRNDEICGGSTERYMFDLLQP
DQIIWEPYKAVMDSLLNFCTNGHDIWQTRSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQTQSGTGDVSP
MMMMPAFETGYYDSRVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLVTDPSSSYMHGHGRGHGEHNEYLYYEPPAAVPEQPMSNNNKRIRRD