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PI0028391 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028391
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr04:21959932..21960126
RNA-Seq ExpressionPI0028391
SyntenyPI0028391
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035596.1 hypothetical protein E6C27_scaffold285G002700 [Cucumis melo var. makuwa]1.8e-0857.89Show/hide
Query:  MGVVQKFYGTKPKAKDFSVQIGGKKVSFNTEAINDLYELPNDADTPRDVYIVRPTKG
        M VV KFY       +F V I GKKV F+TEAIN+LY+LPNDA+ PR   I +PTKG
Subjt:  MGVVQKFYGTKPKAKDFSVQIGGKKVSFNTEAINDLYELPNDADTPRDVYIVRPTKG

KAA0049901.1 hypothetical protein E6C27_scaffold13G00540 [Cucumis melo var. makuwa]9.0e-0542.62Show/hide
Query:  MGVVQKFYGTKPKAKDFSVQIGGKKVSFNTEAINDLYELPNDADTPRDVYIVRPTKGMARE
        + VV+KFY  K    D    I  +K+ F+ EAIN LY+LPND + P    I +PT+G+ +E
Subjt:  MGVVQKFYGTKPKAKDFSVQIGGKKVSFNTEAINDLYELPNDADTPRDVYIVRPTKGMARE

KAA0057357.1 hypothetical protein E6C27_scaffold280G002180 [Cucumis melo var. makuwa]9.0e-0546.67Show/hide
Query:  VVQKFYGTKPKAKDFSVQIGGKKVSFNTEAINDLYELPNDADTPRDVYIVRPTKGMAREA
        VV+KFY +     ++ V + GK + FN EAIN LY+LP DA+TP    I    K  AREA
Subjt:  VVQKFYGTKPKAKDFSVQIGGKKVSFNTEAINDLYELPNDADTPRDVYIVRPTKGMAREA

TYK22172.1 hypothetical protein E5676_scaffold333G00320 [Cucumis melo var. makuwa]1.1e-0547.54Show/hide
Query:  MGVVQKFYGTKPKAKDFSVQIGGKKVSFNTEAINDLYELPNDADTPRDVYIVRPTKGMARE
        M VV KF+       +F V I G++V FN+E I +LY LPN+A+ P    I RP KG ARE
Subjt:  MGVVQKFYGTKPKAKDFSVQIGGKKVSFNTEAINDLYELPNDADTPRDVYIVRPTKGMARE

TYK30940.1 hypothetical protein E5676_scaffold455G001650 [Cucumis melo var. makuwa]1.8e-0857.89Show/hide
Query:  MGVVQKFYGTKPKAKDFSVQIGGKKVSFNTEAINDLYELPNDADTPRDVYIVRPTKG
        M VV KFY       +F V I GKKV F+TEAIN+LY+LPNDA+ PR   I +PTKG
Subjt:  MGVVQKFYGTKPKAKDFSVQIGGKKVSFNTEAINDLYELPNDADTPRDVYIVRPTKG

TrEMBL top hitse value%identityAlignment
A0A5A7T079 Uncharacterized protein8.5e-0957.89Show/hide
Query:  MGVVQKFYGTKPKAKDFSVQIGGKKVSFNTEAINDLYELPNDADTPRDVYIVRPTKG
        M VV KFY       +F V I GKKV F+TEAIN+LY+LPNDA+ PR   I +PTKG
Subjt:  MGVVQKFYGTKPKAKDFSVQIGGKKVSFNTEAINDLYELPNDADTPRDVYIVRPTKG

A0A5A7U8H4 Uncharacterized protein4.4e-0542.62Show/hide
Query:  MGVVQKFYGTKPKAKDFSVQIGGKKVSFNTEAINDLYELPNDADTPRDVYIVRPTKGMARE
        + VV+KFY  K    D    I  +K+ F+ EAIN LY+LPND + P    I +PT+G+ +E
Subjt:  MGVVQKFYGTKPKAKDFSVQIGGKKVSFNTEAINDLYELPNDADTPRDVYIVRPTKGMARE

A0A5A7URT6 Uncharacterized protein4.4e-0546.67Show/hide
Query:  VVQKFYGTKPKAKDFSVQIGGKKVSFNTEAINDLYELPNDADTPRDVYIVRPTKGMAREA
        VV+KFY +     ++ V + GK + FN EAIN LY+LP DA+TP    I    K  AREA
Subjt:  VVQKFYGTKPKAKDFSVQIGGKKVSFNTEAINDLYELPNDADTPRDVYIVRPTKGMAREA

A0A5D3DF10 Uncharacterized protein5.2e-0647.54Show/hide
Query:  MGVVQKFYGTKPKAKDFSVQIGGKKVSFNTEAINDLYELPNDADTPRDVYIVRPTKGMARE
        M VV KF+       +F V I G++V FN+E I +LY LPN+A+ P    I RP KG ARE
Subjt:  MGVVQKFYGTKPKAKDFSVQIGGKKVSFNTEAINDLYELPNDADTPRDVYIVRPTKGMARE

A0A5D3E5P6 Uncharacterized protein8.5e-0957.89Show/hide
Query:  MGVVQKFYGTKPKAKDFSVQIGGKKVSFNTEAINDLYELPNDADTPRDVYIVRPTKG
        M VV KFY       +F V I GKKV F+TEAIN+LY+LPNDA+ PR   I +PTKG
Subjt:  MGVVQKFYGTKPKAKDFSVQIGGKKVSFNTEAINDLYELPNDADTPRDVYIVRPTKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGTGGTACAGAAGTTTTACGGCACAAAGCCTAAAGCAAAGGATTTTAGCGTCCAAATAGGGGGAAAGAAGGTGAGCTTCAACACCGAGGCAATTAATGACCTATA
CGAACTGCCCAATGACGCAGACACACCCAGGGATGTGTATATTGTCAGGCCTACAAAGGGAATGGCTCGTGAAGCGTTTTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGTGGTACAGAAGTTTTACGGCACAAAGCCTAAAGCAAAGGATTTTAGCGTCCAAATAGGGGGAAAGAAGGTGAGCTTCAACACCGAGGCAATTAATGACCTATA
CGAACTGCCCAATGACGCAGACACACCCAGGGATGTGTATATTGTCAGGCCTACAAAGGGAATGGCTCGTGAAGCGTTTTTTTAA
Protein sequenceShow/hide protein sequence
MGVVQKFYGTKPKAKDFSVQIGGKKVSFNTEAINDLYELPNDADTPRDVYIVRPTKGMAREAFF