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PI0028401 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028401
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr10:13578983..13580174
RNA-Seq ExpressionPI0028401
SyntenyPI0028401
Gene Ontology termsGO:0048507 - meristem development (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036767.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]2.7e-6053.31Show/hide
Query:  DWSDKVAHLVVRWQSRRRFIATEASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVVDDPQQVLDICNNNERYMKEIHYMYDVPIVP
        DWSD+VAHLV+RW +RRRF AT   I+QFD DVTQEYIHWY NI++LYIT+PGAA+ HLRSNN RLR+V DDPQQVL+ICN+NE+YM+ IHYMYDVPIVP
Subjt:  DWSDKVAHLVVRWQSRRRFIATEASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVVDDPQQVLDICNNNERYMKEIHYMYDVPIVP

Query:  PPVNRRRVRVEEP-ELDEAYHNVEEVPPVTQTQSR--------------TGYNDLGVGPSS--------------------SYMDVG--PLTSYMHGHGH
         PV RRR  V+EP +L+E   + +EVPP+TQTQS               T Y D GVG SS                     Y D+G  P +SYMHGHG 
Subjt:  PPVNRRRVRVEEP-ELDEAYHNVEEVPPVTQTQSR--------------TGYNDLGVGPSS--------------------SYMDVG--PLTSYMHGHGH

Query:  GCGRGEHNEYLYFEALTDVPD---------------PQKYQQEPENQEELGQPRVQS
          GRG+HNEYLY+E    VP+                   QQ+ EN EE+ Q RVQS
Subjt:  GCGRGEHNEYLYFEALTDVPD---------------PQKYQQEPENQEELGQPRVQS

KAA0036767.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.4e-0367.57Show/hide
Query:  EFPALDDDANEESVIRYARAYILQLMGGSLFFDKSGR
        EF  L +DA+EE++ RYAR YILQLMGGS+F DKS R
Subjt:  EFPALDDDANEESVIRYARAYILQLMGGSLFFDKSGR

KAA0036767.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]2.7e-6053.31Show/hide
Query:  DWSDKVAHLVVRWQSRRRFIATEASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVVDDPQQVLDICNNNERYMKEIHYMYDVPIVP
        DWSD+VAHLV+RW +RRRF AT   I+QFD DVTQEYIHWY NI++LYIT+PGAA+ HLRSNN RLR+V DDPQQVL+ICN+NE+YM+ IHYMYDVPIVP
Subjt:  DWSDKVAHLVVRWQSRRRFIATEASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVVDDPQQVLDICNNNERYMKEIHYMYDVPIVP

Query:  PPVNRRRVRVEEP-ELDEAYHNVEEVPPVTQTQSR--------------TGYNDLGVGPSS--------------------SYMDVG--PLTSYMHGHGH
         PV RRR  V+EP +L+E   + +EVPP+TQTQS               T Y D GVG SS                     Y D+G  P +SYMHGHG 
Subjt:  PPVNRRRVRVEEP-ELDEAYHNVEEVPPVTQTQSR--------------TGYNDLGVGPSS--------------------SYMDVG--PLTSYMHGHGH

Query:  GCGRGEHNEYLYFEALTDVPD---------------PQKYQQEPENQEELGQPRVQS
          GRG+HNEYLY+E    VP+                   QQ+ EN EE+ Q RVQS
Subjt:  GCGRGEHNEYLYFEALTDVPD---------------PQKYQQEPENQEELGQPRVQS

KAA0054357.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]6.9e-6466.34Show/hide
Query:  DWSDKVAHLVVRWQSRRRFIATEASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVVDDPQQVLDICNNNERYMKEIHYMYDVPIVP
        +WSD VAHLVVRWQSRRRF+A   SIQQFD DVTQEYIH YNNITRLYITRPG AVGHLRSNN RLRDVVD PQQVLDICNNNE+YM+EIH MYD+PI  
Subjt:  DWSDKVAHLVVRWQSRRRFIATEASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVVDDPQQVLDICNNNERYMKEIHYMYDVPIVP

Query:  PPVNRRRVRVEEPELDEAYHNVEEVPPVTQTQSRTGYNDLGVGPSSSYMDVGPLTSYMHGHGHGCGRGEHNEYLYFEALTDVPDPQKYQQEPENQEELGQ
                 +  P     Y           ++  TGY D GVGPSS YMDVGP  SYMHGHG   G GEHN+YLY EA  DV D Q+YQQEPENQE+  Q
Subjt:  PPVNRRRVRVEEPELDEAYHNVEEVPPVTQTQSRTGYNDLGVGPSSSYMDVGPLTSYMHGHGHGCGRGEHNEYLYFEALTDVPDPQKYQQEPENQEELGQ

Query:  PRVQS
         RVQS
Subjt:  PRVQS

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]6.7e-6767.94Show/hide
Query:  IATEASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVVDDPQQVLDICNNNERYMKEIHYMYDVPIVPPPVNRRRVRVEEPELDEAY
        +A   SIQQFD+DVTQEYIHWY+NITRLYITRPGAAVG  RSNN RLRDV DD QQ LDICNNNERYM+EIH MYD+PIVPPPV+R  VRVEE ELD+ Y
Subjt:  IATEASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVVDDPQQVLDICNNNERYMKEIHYMYDVPIVPPPVNRRRVRVEEPELDEAY

Query:  HNVEEVPPVTQTQSRTGYN-----------------------DLGVGPSSSYMDVGPLTSYMHGHGHGCGRGEHNEYLYFEALTDVPDPQKYQQEPENQE
        HNVEEVP  TQTQS+TGY                        D GVGPSSSY+DV P TSYMHGH    G GEHNEYLY EA  DV D Q+YQQEPENQE
Subjt:  HNVEEVPPVTQTQSRTGYN-----------------------DLGVGPSSSYMDVGPLTSYMHGHGHGCGRGEHNEYLYFEALTDVPDPQKYQQEPENQE

Query:  ELGQPRVQS
        +  Q RVQS
Subjt:  ELGQPRVQS

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.5e-0555.93Show/hide
Query:  LGVIPPANIIK-----------EFPALDDDANEESVIRYARAYILQLMGGSLFFDKSGR
        LGVIPP   I+           EF  L +DA+EE++ RYARAYILQLMGGS+F DKS R
Subjt:  LGVIPPANIIK-----------EFPALDDDANEESVIRYARAYILQLMGGSLFFDKSGR

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]3.5e-7644.29Show/hide
Query:  MFLGVIPPANIIK-----------EFPALDDDANEESVIRYARAYILQLMGGSLFFDKSG---------------------------------------R
        M LGV+ PAN IK           +FP LDDDA EE VIRYARAYILQLM  SLF DKSG                                       R
Subjt:  MFLGVIPPANIIK-----------EFPALDDDANEESVIRYARAYILQLMGGSLFFDKSG---------------------------------------R

Query:  DWSDKVAHLVV-------------------------------RW--------------------------------------------------------
        D  D    L++                               RW                                                        
Subjt:  DWSDKVAHLVV-------------------------------RW--------------------------------------------------------

Query:  -----------------------QSRRRFIATEASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVVDDPQQVLDICNNNERYMKEI
                               +SRRRF+  E SIQQFD DVTQEYIH YNNITRLYITRPGA VGHLRSNN RLRDVV+DPQQVLDICNNNERYM++I
Subjt:  -----------------------QSRRRFIATEASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVVDDPQQVLDICNNNERYMKEI

Query:  HYMYDVPIVPPPVNRRRVRVEEPELDEAYHNVEEVPPVTQTQSRTGYN-----------------------DLGVGPSSSYMDVGPLTSYMHGHGHGCGR
        H +YD+PIVPPPV+R R RVEE ELDE YHNVEEVPP TQTQS+TGY                        D  VGP SSYMDVGP TSYM+GHG   G 
Subjt:  HYMYDVPIVPPPVNRRRVRVEEPELDEAYHNVEEVPPVTQTQSRTGYN-----------------------DLGVGPSSSYMDVGPLTSYMHGHGHGCGR

Query:  GEHNEYLYFEALTDVPDPQKYQQEPENQEELGQPRVQS
        GEHNEYLY EA TDV D Q+YQQEP+NQE+  Q RVQS
Subjt:  GEHNEYLYFEALTDVPDPQKYQQEPENQEELGQPRVQS

TrEMBL top hitse value%identityAlignment
A0A5A7T598 Serine/threonine-protein phosphatase 7 long form-like protein6.6e-0467.57Show/hide
Query:  EFPALDDDANEESVIRYARAYILQLMGGSLFFDKSGR
        EF  L +DA+EE++ RYAR YILQLMGGS+F DKS R
Subjt:  EFPALDDDANEESVIRYARAYILQLMGGSLFFDKSGR

A0A5A7UIF6 Serine/threonine-protein phosphatase 7 long form-like protein3.3e-6466.34Show/hide
Query:  DWSDKVAHLVVRWQSRRRFIATEASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVVDDPQQVLDICNNNERYMKEIHYMYDVPIVP
        +WSD VAHLVVRWQSRRRF+A   SIQQFD DVTQEYIH YNNITRLYITRPG AVGHLRSNN RLRDVVD PQQVLDICNNNE+YM+EIH MYD+PI  
Subjt:  DWSDKVAHLVVRWQSRRRFIATEASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVVDDPQQVLDICNNNERYMKEIHYMYDVPIVP

Query:  PPVNRRRVRVEEPELDEAYHNVEEVPPVTQTQSRTGYNDLGVGPSSSYMDVGPLTSYMHGHGHGCGRGEHNEYLYFEALTDVPDPQKYQQEPENQEELGQ
                 +  P     Y           ++  TGY D GVGPSS YMDVGP  SYMHGHG   G GEHN+YLY EA  DV D Q+YQQEPENQE+  Q
Subjt:  PPVNRRRVRVEEPELDEAYHNVEEVPPVTQTQSRTGYNDLGVGPSSSYMDVGPLTSYMHGHGHGCGRGEHNEYLYFEALTDVPDPQKYQQEPENQEELGQ

Query:  PRVQS
         RVQS
Subjt:  PRVQS

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.2e-6767.94Show/hide
Query:  IATEASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVVDDPQQVLDICNNNERYMKEIHYMYDVPIVPPPVNRRRVRVEEPELDEAY
        +A   SIQQFD+DVTQEYIHWY+NITRLYITRPGAAVG  RSNN RLRDV DD QQ LDICNNNERYM+EIH MYD+PIVPPPV+R  VRVEE ELD+ Y
Subjt:  IATEASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVVDDPQQVLDICNNNERYMKEIHYMYDVPIVPPPVNRRRVRVEEPELDEAY

Query:  HNVEEVPPVTQTQSRTGYN-----------------------DLGVGPSSSYMDVGPLTSYMHGHGHGCGRGEHNEYLYFEALTDVPDPQKYQQEPENQE
        HNVEEVP  TQTQS+TGY                        D GVGPSSSY+DV P TSYMHGH    G GEHNEYLY EA  DV D Q+YQQEPENQE
Subjt:  HNVEEVPPVTQTQSRTGYN-----------------------DLGVGPSSSYMDVGPLTSYMHGHGHGCGRGEHNEYLYFEALTDVPDPQKYQQEPENQE

Query:  ELGQPRVQS
        +  Q RVQS
Subjt:  ELGQPRVQS

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein1.3e-6053.31Show/hide
Query:  DWSDKVAHLVVRWQSRRRFIATEASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVVDDPQQVLDICNNNERYMKEIHYMYDVPIVP
        DWSD+VAHLV+RW +RRRF AT   I+QFD DVTQEYIHWY NI++LYIT+PGAA+ HLRSNN RLR+V DDPQQVL+ICN+NE+YM+ IHYMYDVPIVP
Subjt:  DWSDKVAHLVVRWQSRRRFIATEASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVVDDPQQVLDICNNNERYMKEIHYMYDVPIVP

Query:  PPVNRRRVRVEEP-ELDEAYHNVEEVPPVTQTQSR--------------TGYNDLGVGPSS--------------------SYMDVG--PLTSYMHGHGH
         PV RRR  V+EP +L+E   + +EVPP+TQTQS               T Y D GVG SS                     Y D+G  P +SYMHGHG 
Subjt:  PPVNRRRVRVEEP-ELDEAYHNVEEVPPVTQTQSR--------------TGYNDLGVGPSS--------------------SYMDVG--PLTSYMHGHGH

Query:  GCGRGEHNEYLYFEALTDVPD---------------PQKYQQEPENQEELGQPRVQS
          GRG+HNEYLY+E    VP+                   QQ+ EN EE+ Q RVQS
Subjt:  GCGRGEHNEYLYFEALTDVPD---------------PQKYQQEPENQEELGQPRVQS

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein7.1e-0655.93Show/hide
Query:  LGVIPPANIIK-----------EFPALDDDANEESVIRYARAYILQLMGGSLFFDKSGR
        LGVIPP   I+           EF  L +DA+EE++ RYARAYILQLMGGS+F DKS R
Subjt:  LGVIPPANIIK-----------EFPALDDDANEESVIRYARAYILQLMGGSLFFDKSGR

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein1.3e-6053.31Show/hide
Query:  DWSDKVAHLVVRWQSRRRFIATEASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVVDDPQQVLDICNNNERYMKEIHYMYDVPIVP
        DWSD+VAHLV+RW +RRRF AT   I+QFD DVTQEYIHWY NI++LYIT+PGAA+ HLRSNN RLR+V DDPQQVL+ICN+NE+YM+ IHYMYDVPIVP
Subjt:  DWSDKVAHLVVRWQSRRRFIATEASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVVDDPQQVLDICNNNERYMKEIHYMYDVPIVP

Query:  PPVNRRRVRVEEP-ELDEAYHNVEEVPPVTQTQSR--------------TGYNDLGVGPSS--------------------SYMDVG--PLTSYMHGHGH
         PV RRR  V+EP +L+E   + +EVPP+TQTQS               T Y D GVG SS                     Y D+G  P +SYMHGHG 
Subjt:  PPVNRRRVRVEEP-ELDEAYHNVEEVPPVTQTQSR--------------TGYNDLGVGPSS--------------------SYMDVG--PLTSYMHGHGH

Query:  GCGRGEHNEYLYFEALTDVPD---------------PQKYQQEPENQEELGQPRVQS
          GRG+HNEYLY+E    VP+                   QQ+ EN EE+ Q RVQS
Subjt:  GCGRGEHNEYLYFEALTDVPD---------------PQKYQQEPENQEELGQPRVQS

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein1.7e-7644.29Show/hide
Query:  MFLGVIPPANIIK-----------EFPALDDDANEESVIRYARAYILQLMGGSLFFDKSG---------------------------------------R
        M LGV+ PAN IK           +FP LDDDA EE VIRYARAYILQLM  SLF DKSG                                       R
Subjt:  MFLGVIPPANIIK-----------EFPALDDDANEESVIRYARAYILQLMGGSLFFDKSG---------------------------------------R

Query:  DWSDKVAHLVV-------------------------------RW--------------------------------------------------------
        D  D    L++                               RW                                                        
Subjt:  DWSDKVAHLVV-------------------------------RW--------------------------------------------------------

Query:  -----------------------QSRRRFIATEASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVVDDPQQVLDICNNNERYMKEI
                               +SRRRF+  E SIQQFD DVTQEYIH YNNITRLYITRPGA VGHLRSNN RLRDVV+DPQQVLDICNNNERYM++I
Subjt:  -----------------------QSRRRFIATEASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVVDDPQQVLDICNNNERYMKEI

Query:  HYMYDVPIVPPPVNRRRVRVEEPELDEAYHNVEEVPPVTQTQSRTGYN-----------------------DLGVGPSSSYMDVGPLTSYMHGHGHGCGR
        H +YD+PIVPPPV+R R RVEE ELDE YHNVEEVPP TQTQS+TGY                        D  VGP SSYMDVGP TSYM+GHG   G 
Subjt:  HYMYDVPIVPPPVNRRRVRVEEPELDEAYHNVEEVPPVTQTQSRTGYN-----------------------DLGVGPSSSYMDVGPLTSYMHGHGHGCGR

Query:  GEHNEYLYFEALTDVPDPQKYQQEPENQEELGQPRVQS
        GEHNEYLY EA TDV D Q+YQQEP+NQE+  Q RVQS
Subjt:  GEHNEYLYFEALTDVPDPQKYQQEPENQEELGQPRVQS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCTTGGTGTGATCCCACCTGCTAATATAATAAAGGAATTTCCGGCACTTGATGATGATGCAAACGAGGAAAGTGTCATCAGATATGCAAGAGCATACATTCTACA
ACTAATGGGTGGGAGTCTATTTTTTGACAAATCGGGTCGGGATTGGTCAGACAAGGTTGCACATTTAGTCGTGCGATGGCAATCTCGTAGAAGATTCATTGCCACTGAAG
CTTCGATTCAACAATTTGATCAGGATGTCACTCAAGAATACATCCACTGGTATAATAATATTACGAGGCTCTACATCACTCGACCAGGAGCAGCTGTGGGTCATCTGAGA
TCGAACAACAGAAGACTTCGTGATGTTGTAGATGATCCGCAACAAGTCCTTGATATATGTAATAATAATGAGAGGTACATGAAGGAGATACATTATATGTACGATGTACC
TATTGTACCTCCACCAGTTAACAGGAGACGTGTTCGAGTGGAAGAACCTGAACTCGATGAAGCTTACCATAACGTAGAAGAAGTACCTCCAGTGACACAAACACAGAGCC
GAACTGGATATAATGACTTGGGGGTCGGTCCATCGTCTTCATACATGGATGTCGGACCATTAACTTCTTACATGCATGGACATGGACACGGATGCGGTCGCGGAGAACAT
AACGAATATCTGTACTTTGAAGCACTTACAGACGTCCCAGATCCACAAAAGTATCAACAAGAACCAGAGAATCAAGAGGAGCTAGGGCAACCAAGAGTTCAAAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCCTTGGTGTGATCCCACCTGCTAATATAATAAAGGAATTTCCGGCACTTGATGATGATGCAAACGAGGAAAGTGTCATCAGATATGCAAGAGCATACATTCTACA
ACTAATGGGTGGGAGTCTATTTTTTGACAAATCGGGTCGGGATTGGTCAGACAAGGTTGCACATTTAGTCGTGCGATGGCAATCTCGTAGAAGATTCATTGCCACTGAAG
CTTCGATTCAACAATTTGATCAGGATGTCACTCAAGAATACATCCACTGGTATAATAATATTACGAGGCTCTACATCACTCGACCAGGAGCAGCTGTGGGTCATCTGAGA
TCGAACAACAGAAGACTTCGTGATGTTGTAGATGATCCGCAACAAGTCCTTGATATATGTAATAATAATGAGAGGTACATGAAGGAGATACATTATATGTACGATGTACC
TATTGTACCTCCACCAGTTAACAGGAGACGTGTTCGAGTGGAAGAACCTGAACTCGATGAAGCTTACCATAACGTAGAAGAAGTACCTCCAGTGACACAAACACAGAGCC
GAACTGGATATAATGACTTGGGGGTCGGTCCATCGTCTTCATACATGGATGTCGGACCATTAACTTCTTACATGCATGGACATGGACACGGATGCGGTCGCGGAGAACAT
AACGAATATCTGTACTTTGAAGCACTTACAGACGTCCCAGATCCACAAAAGTATCAACAAGAACCAGAGAATCAAGAGGAGCTAGGGCAACCAAGAGTTCAAAGTTGA
Protein sequenceShow/hide protein sequence
MFLGVIPPANIIKEFPALDDDANEESVIRYARAYILQLMGGSLFFDKSGRDWSDKVAHLVVRWQSRRRFIATEASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLR
SNNRRLRDVVDDPQQVLDICNNNERYMKEIHYMYDVPIVPPPVNRRRVRVEEPELDEAYHNVEEVPPVTQTQSRTGYNDLGVGPSSSYMDVGPLTSYMHGHGHGCGRGEH
NEYLYFEALTDVPDPQKYQQEPENQEELGQPRVQS