; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0028446 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028446
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionbinding partner of ACD11 1-like
Genome locationchr11:25898886..25901206
RNA-Seq ExpressionPI0028446
SyntenyPI0028446
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042981.1 binding partner of ACD11 1-like isoform X1 [Cucumis melo var. makuwa]3.0e-12097.22Show/hide
Query:  MATRTVKVTNVSLSATEKDLRDFFSFSGEIEFVEIRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAID
        MATRTV+VTNVSLSATEKDLRDFFSFSGEIEFVE+RNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAID
Subjt:  MATRTVKVTNVSLSATEKDLRDFFSFSGEIEFVEIRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAID

Query:  NTTSTTTTAGSAIQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAG
        NTTSTTTTAGSAIQK EDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAG
Subjt:  NTTSTTTTAGSAIQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAG

Query:  SAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLA-EDQEKHVGNSS
        SA+M NRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLA EDQ KHVGNSS
Subjt:  SAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLA-EDQEKHVGNSS

XP_004148092.1 binding partner of ACD11 1 [Cucumis sativus]3.7e-11896.44Show/hide
Query:  MATRTVKVTNVSLSATEKDLRDFFSFSGEIEFVEIRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAID
        MATRTV+VTNVSLSATEKDLRDFFSFSGEIEFVE+RNDNERSQLAFVTFKD KGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPA+D
Subjt:  MATRTVKVTNVSLSATEKDLRDFFSFSGEIEFVEIRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAID

Query:  NTTSTT-TTAGSAIQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNA
        NTTSTT +TAGSA+QKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNA
Subjt:  NTTSTT-TTAGSAIQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNA

Query:  GSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLA-EDQEKHVGNSS
        GSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLA EDQ KHVGNSS
Subjt:  GSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLA-EDQEKHVGNSS

XP_016902374.1 PREDICTED: binding partner of ACD11 1-like isoform X1 [Cucumis melo]3.4e-10897.38Show/hide
Query:  FSFSGEIEFVEIRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKAEDVVSSM
        FSFSGEIEFVE+RNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTTTTAGSAIQK EDVVSSM
Subjt:  FSFSGEIEFVEIRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKAEDVVSSM

Query:  LAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQTFQRV
        LAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSA+M NRYVLTGASWVSQTFQRV
Subjt:  LAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQTFQRV

Query:  AKAAVDVSQKTKEKVLA-EDQEKHVGNSS
        AKAAVDVSQKTKEKVLA EDQ KHVGNSS
Subjt:  AKAAVDVSQKTKEKVLA-EDQEKHVGNSS

XP_038900617.1 binding partner of ACD11 1-like isoform X1 [Benincasa hispida]7.7e-11693.63Show/hide
Query:  MATRTVKVTNVSLSATEKDLRDFFSFSGEIEFVEIRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAID
        MA RTV+VTNVSLS TEKDLRDFFSFSGEIEFVE+R D ERSQLAFVTFKDPKGAETSILLSGATIVDQPVSI+SAPDYNLPAV+ASAPVA+PVSTPA D
Subjt:  MATRTVKVTNVSLSATEKDLRDFFSFSGEIEFVEIRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAID

Query:  NTTSTTTTAGSAIQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAG
        NT S T+TAGSA+QKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAG
Subjt:  NTTSTTTTAGSAIQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAG

Query:  SAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEDQEKHVGNSS
        SAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVL EDQ KHVGNSS
Subjt:  SAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEDQEKHVGNSS

XP_038900618.1 binding partner of ACD11 1-like isoform X2 [Benincasa hispida]5.0e-11593.95Show/hide
Query:  RTVKVTNVSLSATEKDLRDFFSFSGEIEFVEIRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTT
        RTV+VTNVSLS TEKDLRDFFSFSGEIEFVE+R D ERSQLAFVTFKDPKGAETSILLSGATIVDQPVSI+SAPDYNLPAV+ASAPVA+PVSTPA DNT 
Subjt:  RTVKVTNVSLSATEKDLRDFFSFSGEIEFVEIRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTT

Query:  STTTTAGSAIQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAI
        S T+TAGSA+QKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAI
Subjt:  STTTTAGSAIQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAI

Query:  MTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEDQEKHVGNSS
        MTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVL EDQ KHVGNSS
Subjt:  MTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEDQEKHVGNSS

TrEMBL top hitse value%identityAlignment
A0A0A0LRG1 RRM domain-containing protein1.8e-11896.44Show/hide
Query:  MATRTVKVTNVSLSATEKDLRDFFSFSGEIEFVEIRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAID
        MATRTV+VTNVSLSATEKDLRDFFSFSGEIEFVE+RNDNERSQLAFVTFKD KGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPA+D
Subjt:  MATRTVKVTNVSLSATEKDLRDFFSFSGEIEFVEIRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAID

Query:  NTTSTT-TTAGSAIQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNA
        NTTSTT +TAGSA+QKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNA
Subjt:  NTTSTT-TTAGSAIQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNA

Query:  GSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLA-EDQEKHVGNSS
        GSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLA EDQ KHVGNSS
Subjt:  GSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLA-EDQEKHVGNSS

A0A1S3CAU8 binding partner of ACD11 1-like isoform X23.0e-10297.25Show/hide
Query:  IRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKAEDVVSSMLAKGFTLGKDA
        +RNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTTTTAGSAIQK EDVVSSMLAKGFTLGKDA
Subjt:  IRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKAEDVVSSMLAKGFTLGKDA

Query:  LNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKT
        LNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSA+M NRYVLTGASWVSQTFQRVAKAAVDVSQKT
Subjt:  LNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKT

Query:  KEKVLA-EDQEKHVGNSS
        KEKVLA EDQ KHVGNSS
Subjt:  KEKVLA-EDQEKHVGNSS

A0A1S4E2B3 binding partner of ACD11 1-like isoform X11.7e-10897.38Show/hide
Query:  FSFSGEIEFVEIRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKAEDVVSSM
        FSFSGEIEFVE+RNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTTTTAGSAIQK EDVVSSM
Subjt:  FSFSGEIEFVEIRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKAEDVVSSM

Query:  LAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQTFQRV
        LAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSA+M NRYVLTGASWVSQTFQRV
Subjt:  LAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQTFQRV

Query:  AKAAVDVSQKTKEKVLA-EDQEKHVGNSS
        AKAAVDVSQKTKEKVLA EDQ KHVGNSS
Subjt:  AKAAVDVSQKTKEKVLA-EDQEKHVGNSS

A0A5A7TN24 Binding partner of ACD11 1-like isoform X11.5e-12097.22Show/hide
Query:  MATRTVKVTNVSLSATEKDLRDFFSFSGEIEFVEIRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAID
        MATRTV+VTNVSLSATEKDLRDFFSFSGEIEFVE+RNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAID
Subjt:  MATRTVKVTNVSLSATEKDLRDFFSFSGEIEFVEIRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAID

Query:  NTTSTTTTAGSAIQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAG
        NTTSTTTTAGSAIQK EDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAG
Subjt:  NTTSTTTTAGSAIQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAG

Query:  SAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLA-EDQEKHVGNSS
        SA+M NRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLA EDQ KHVGNSS
Subjt:  SAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLA-EDQEKHVGNSS

A0A6J1L7W4 binding partner of ACD11 1-like1.1e-9983.81Show/hide
Query:  RTVKVTNVSLSATEKDLRDFFSFSGEIEFVEIRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTT
        RTV+VTNVSLSA+EKDLRDFFSFSGEIEFVE+R DNERSQ+AFVTFKD KGAETSILLSGATIVDQPVSI++APDYNLPAV ASAP  +PVS+P+ +N  
Subjt:  RTVKVTNVSLSATEKDLRDFFSFSGEIEFVEIRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTT

Query:  STTTTAGSAIQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAI
        S   TAGSA+QKAEDVVSSMLAKGFTLGKD LN+AKSFD++HQLTSTASSKV SLDQKIGLSEKISVGTTVVNEKV+EMDEKFQVSEKTKAAV+NAG+A+
Subjt:  STTTTAGSAIQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAI

Query:  MTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEDQEKHVGNS
        M NRYV TGASWV+QTFQRVAKAAV+VS KTKEKVLAEDQ K  G S
Subjt:  MTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEDQEKHVGNS

SwissProt top hitse value%identityAlignment
P87216 Protein vip11.4e-0628.12Show/hide
Query:  VKVTNVSLSATEKDLRDFFSFSGEIEFVEIRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTST
        V VTN+S   TEK + DFFSF G++  +      E +Q A + F+ P   +T++LL  A +    + I+S         D  A            +TT  
Subjt:  VKVTNVSLSATEKDLRDFFSFSGEIEFVEIRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTST

Query:  TTTAGSAIQKAED-----VVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTV-VNEKVREMDEKFQVSEK
            G    + ED     ++S +L++G+ L    L K+   D+ + ++S     + S      LS   SV     V EK  E+D KF +S+K
Subjt:  TTTAGSAIQKAED-----VVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTV-VNEKVREMDEKFQVSEK

Q9LFD5 Binding partner of ACD11 11.6e-6055.92Show/hide
Query:  RTVKVTNVSLSATEKDLRDFFSFSGEIEFVEIRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTT
        R+VKV N+S  ATE D+++FFSFSGE+E ++I++ NE S  A+VTFK+ +GAET++LLSGA+I DQ V I  AP+Y               S PA  +  
Subjt:  RTVKVTNVSLSATEKDLRDFFSFSGEIEFVEIRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTT

Query:  STTTTAGSAIQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA-------AV
        + ++ A S +QKAEDVVSSMLAKGF LGKDA+ KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK++ +D+ FQV+E+TK+        V
Subjt:  STTTTAGSAIQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA-------AV

Query:  SNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAE
        S+AGSA+M NRYVLTG SW +  F RVA+AA +V QKTKEKV AE
Subjt:  SNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAE

Arabidopsis top hitse value%identityAlignment
AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein6.8e-7060.08Show/hide
Query:  MATRTVKVTNVSLSATEKDLRDFFSFSGEIEFVEIRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAID
        M   TVKV+NVSL AT++DL++FFSFSG+I ++E +++ ER++LA+VTFKD +GAET++LLSGATIVD  V +S APDY L      +P A+    P   
Subjt:  MATRTVKVTNVSLSATEKDLRDFFSFSGEIEFVEIRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAID

Query:  NTTSTTTTAGSAIQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAA-----
        N   +     S ++KAEDVVSSMLAKGF LGKDA+ KAKS DE+HQLTSTAS+KVAS D+KIG ++KI+ GT VV EKVRE+D+K+QVSEKTK+A     
Subjt:  NTTSTTTTAGSAIQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAA-----

Query:  --VSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKV-LAEDQEK
          VSNAGSAIM NRYVLTGA+WV+  F +VAKAA +V QK KEKV +AE+++K
Subjt:  --VSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKV-LAEDQEK

AT5G16840.1 binding partner of acd11 11.2e-6155.92Show/hide
Query:  RTVKVTNVSLSATEKDLRDFFSFSGEIEFVEIRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTT
        R+VKV N+S  ATE D+++FFSFSGE+E ++I++ NE S  A+VTFK+ +GAET++LLSGA+I DQ V I  AP+Y               S PA  +  
Subjt:  RTVKVTNVSLSATEKDLRDFFSFSGEIEFVEIRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTT

Query:  STTTTAGSAIQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA-------AV
        + ++ A S +QKAEDVVSSMLAKGF LGKDA+ KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK++ +D+ FQV+E+TK+        V
Subjt:  STTTTAGSAIQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA-------AV

Query:  SNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAE
        S+AGSA+M NRYVLTG SW +  F RVA+AA +V QKTKEKV AE
Subjt:  SNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAE

AT5G16840.2 binding partner of acd11 14.7e-6355.92Show/hide
Query:  RTVKVTNVSLSATEKDLRDFFSFSGEIEFVEIRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTT
        R+VKV N+S  ATE D+++FFSFSGE+E ++I++ NE S  A+VTFK+ +GAET++LLSGA+I DQ V I  AP+Y               S PA  +  
Subjt:  RTVKVTNVSLSATEKDLRDFFSFSGEIEFVEIRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTT

Query:  STTTTAGSAIQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA-------AV
        + ++ A S +QKAEDVVSSMLAKGF LGKDA+ KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK++ +D+ FQV+E+TK+        V
Subjt:  STTTTAGSAIQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA-------AV

Query:  SNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAE
        S+AGSA+M NRYVLTG SW +  F RVA+AA +V QKTKEKV AE
Subjt:  SNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAE

AT5G16840.3 binding partner of acd11 11.4e-6256.05Show/hide
Query:  MATRTVKVTNVSLSATEKDLRDFFSFSGEIEFVEIRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAID
        MA R+VKV N+S  ATE D+++FFSFSGE+E ++I++ NE S  A+VTFK+ +GAET++LLSGA+I DQ V I  AP+Y               S PA  
Subjt:  MATRTVKVTNVSLSATEKDLRDFFSFSGEIEFVEIRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAID

Query:  NTTSTTTTAGSAIQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA------
        +  + ++ A S +QKAEDVVSSMLAKGF LGKDA+ KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK++ +D+ FQV+E+TK+      
Subjt:  NTTSTTTTAGSAIQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA------

Query:  -AVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAE
          VS+AGSA+M NRYVLTG SW +  F RVA+AA +V QKTKEKV AE
Subjt:  -AVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAE

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.7e-6958.5Show/hide
Query:  MATRTVKVTNVSLSATEKDLRDFFSFSGEIEFVEIRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAID
        M+  TVKV+NVSL ATE+DL++FFSFSG+I ++E +++N+ S+LA+VTFKD +GAET++LL+G+TIVD  V+++ +PDY LP  DA A +    S    +
Subjt:  MATRTVKVTNVSLSATEKDLRDFFSFSGEIEFVEIRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAID

Query:  NTTSTTTTAGSAIQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAA-----
         ++S T    S  +KAEDVVS M++KGF LGKDA+ KAKS DE+HQLTSTAS++V S D++IG +EKI+ GTTVV+EKV+E+D+KFQV+EKTK+A     
Subjt:  NTTSTTTTAGSAIQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAA-----

Query:  --VSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKV-LAEDQEK
          VSNAGSAIM NRYVLTGA+WV+  F RV+KAA +V QK KEKV LAE++E+
Subjt:  --VSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKV-LAEDQEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACGAGGACGGTGAAAGTTACCAATGTCTCCTTAAGCGCAACAGAGAAAGATTTGAGAGACTTTTTTTCCTTTTCCGGTGAAATTGAATTTGTCGAAATTAGAAA
TGACAATGAGCGATCTCAACTTGCATTTGTTACCTTTAAGGATCCAAAAGGGGCAGAGACGTCGATTCTACTCTCGGGAGCTACAATTGTCGATCAGCCAGTAAGCATTT
CTTCGGCTCCAGATTACAACCTTCCGGCAGTTGATGCCAGTGCCCCTGTAGCTGTACCCGTGTCTACTCCAGCTATAGACAACACAACCTCTACTACTACTACTGCTGGA
TCTGCAATCCAAAAGGCAGAAGATGTTGTCAGCAGCATGCTAGCCAAAGGCTTCACTTTGGGCAAAGATGCCCTTAATAAGGCAAAGTCTTTCGACGAAAGACACCAATT
GACTTCGACAGCCTCATCCAAAGTTGCTTCTCTGGACCAAAAGATCGGCCTTAGCGAGAAAATTAGTGTTGGCACAACCGTGGTGAATGAGAAAGTGAGGGAAATGGATG
AGAAGTTTCAAGTGTCTGAGAAGACTAAGGCAGCCGTGAGCAATGCTGGATCAGCTATAATGACTAACCGCTATGTCTTAACCGGTGCTTCCTGGGTTAGCCAGACATTT
CAACGAGTCGCAAAAGCTGCTGTAGATGTTAGCCAGAAAACGAAGGAGAAGGTTTTAGCTGAGGATCAAGAGAAGCATGTGGGAAATTCTTCTTAA
mRNA sequenceShow/hide mRNA sequence
AAACAACCGCCAAGCCACAACACAACTCTCAAGGCATTATTCCTTCTTCTTTTCTCCTCTCTCTCTCTCTCTAAGAATTTGAATTGGCAAATCTCTCAGGTGAATCAAAC
AGAAGAATCATGGCGACGAGGACGGTGAAAGTTACCAATGTCTCCTTAAGCGCAACAGAGAAAGATTTGAGAGACTTTTTTTCCTTTTCCGGTGAAATTGAATTTGTCGA
AATTAGAAATGACAATGAGCGATCTCAACTTGCATTTGTTACCTTTAAGGATCCAAAAGGGGCAGAGACGTCGATTCTACTCTCGGGAGCTACAATTGTCGATCAGCCAG
TAAGCATTTCTTCGGCTCCAGATTACAACCTTCCGGCAGTTGATGCCAGTGCCCCTGTAGCTGTACCCGTGTCTACTCCAGCTATAGACAACACAACCTCTACTACTACT
ACTGCTGGATCTGCAATCCAAAAGGCAGAAGATGTTGTCAGCAGCATGCTAGCCAAAGGCTTCACTTTGGGCAAAGATGCCCTTAATAAGGCAAAGTCTTTCGACGAAAG
ACACCAATTGACTTCGACAGCCTCATCCAAAGTTGCTTCTCTGGACCAAAAGATCGGCCTTAGCGAGAAAATTAGTGTTGGCACAACCGTGGTGAATGAGAAAGTGAGGG
AAATGGATGAGAAGTTTCAAGTGTCTGAGAAGACTAAGGCAGCCGTGAGCAATGCTGGATCAGCTATAATGACTAACCGCTATGTCTTAACCGGTGCTTCCTGGGTTAGC
CAGACATTTCAACGAGTCGCAAAAGCTGCTGTAGATGTTAGCCAGAAAACGAAGGAGAAGGTTTTAGCTGAGGATCAAGAGAAGCATGTGGGAAATTCTTCTTAAAGTCA
TTACAAGAATTGCTGCGCTCCAATATATAAAAATGATATATATTTGGCCAAAACAATGTGAGGACCAATTCTCTTAGCTTCCTAATTTTGATCTCAGTTTGATATATTTT
TAATGCTTTATTTTAGTTTTAGTATTAGGGAGTATACATACATATACGCCACATTACATGCTTATGTTGTAATTCAATTGTAAGAAAAGCATATATATATATGCTATGTG
ATACGAGCTTTCCTTGTTTA
Protein sequenceShow/hide protein sequence
MATRTVKVTNVSLSATEKDLRDFFSFSGEIEFVEIRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTTTTAG
SAIQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQTF
QRVAKAAVDVSQKTKEKVLAEDQEKHVGNSS