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PI0028454 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028454
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionlate embryogenesis abundant protein At5g17165-like
Genome locationchr09:3822605..3824300
RNA-Seq ExpressionPI0028454
SyntenyPI0028454
Gene Ontology termsNA
InterPro domainsIPR039291 - Late embryogenesis abundant protein At5g17165-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055104.1 uncharacterized protein E6C27_scaffold231G00300 [Cucumis melo var. makuwa]1.0e-5282.95Show/hide
Query:  MACSSKIIV-----AAAPRLLLLFPHNP-LFPFANFGIRASHWSAYEKNQEDQIWPTMVPNHVIHHNPSENYWTPHPETGVFGPPKAHHNSSTVPNDTSA
        MACSSKIIV     AAAPRL LL  H+P LFPFAN G RASHWSAYEKNQED IWPTMVPN VIHHN S+NYW PHP+TGVFGPPKAHH+SST+PNDTSA
Subjt:  MACSSKIIV-----AAAPRLLLLFPHNP-LFPFANFGIRASHWSAYEKNQEDQIWPTMVPNHVIHHNPSENYWTPHPETGVFGPPKAHHNSSTVPNDTSA

Query:  GGSE-GSVLNLKAWFRHNGLEDLEKPHSL
        GG+E GSVLNLKAWFRHNGLEDLEKPHSL
Subjt:  GGSE-GSVLNLKAWFRHNGLEDLEKPHSL

KAE8647930.1 hypothetical protein Csa_000491 [Cucumis sativus]3.4e-5381.54Show/hide
Query:  MACSSKIIVAAA---PRLLLLFPHNPLFPFANFG-----IRASHWSAYEKNQEDQIWPTMVPNHVIHHNPSENYWTPHPETGVFGPPKAHHNSSTVPNDT
        MACSSKIIVAAA   PRL LL PH  LFPF NFG      R+SHWSAYEKNQEDQIWPTMVPNH+I  + SE+YW PHPETGVFGPPKAHHNSSTVPNDT
Subjt:  MACSSKIIVAAA---PRLLLLFPHNPLFPFANFG-----IRASHWSAYEKNQEDQIWPTMVPNHVIHHNPSENYWTPHPETGVFGPPKAHHNSSTVPNDT

Query:  SAGGSEGSVLNLKAWFRHNGLEDLEKPHSL
        SAGG+EGSVLNLKAWFRHNGLEDLEKPH+L
Subjt:  SAGGSEGSVLNLKAWFRHNGLEDLEKPHSL

XP_004143665.1 late embryogenesis abundant protein At5g17165 [Cucumis sativus]4.8e-5584.8Show/hide
Query:  MACSSKIIVAAA---PRLLLLFPHNPLFPFANFGIRASHWSAYEKNQEDQIWPTMVPNHVIHHNPSENYWTPHPETGVFGPPKAHHNSSTVPNDTSAGGS
        MACSSKIIVAAA   PRL LL PH  LFPF NFG R+SHWSAYEKNQEDQIWPTMVPNH+I  + SE+YW PHPETGVFGPPKAHHNSSTVPNDTSAGG+
Subjt:  MACSSKIIVAAA---PRLLLLFPHNPLFPFANFGIRASHWSAYEKNQEDQIWPTMVPNHVIHHNPSENYWTPHPETGVFGPPKAHHNSSTVPNDTSAGGS

Query:  EGSVLNLKAWFRHNGLEDLEKPHSL
        EGSVLNLKAWFRHNGLEDLEKPH+L
Subjt:  EGSVLNLKAWFRHNGLEDLEKPHSL

XP_016903720.1 PREDICTED: uncharacterized protein LOC103504694 [Cucumis melo]2.2e-5283.2Show/hide
Query:  SSKIIV-----AAAPRLLLLFPHNP-LFPFANFGIRASHWSAYEKNQEDQIWPTMVPNHVIHHNPSENYWTPHPETGVFGPPKAHHNSSTVPNDTSAGGS
        +SKIIV     AAAPRL LL  H+P LFPFAN G RASHWSAYEKNQED IWPTMVPN VIHHN S+NYW PHP+TGVFGPPKAHHNSST+PNDTSAGG+
Subjt:  SSKIIV-----AAAPRLLLLFPHNP-LFPFANFGIRASHWSAYEKNQEDQIWPTMVPNHVIHHNPSENYWTPHPETGVFGPPKAHHNSSTVPNDTSAGGS

Query:  EGSVLNLKAWFRHNGLEDLEKPHSL
        EGSVLNLKAWFRHNGLEDLEKPHSL
Subjt:  EGSVLNLKAWFRHNGLEDLEKPHSL

XP_038875585.1 late embryogenesis abundant protein At5g17165-like [Benincasa hispida]1.4e-4170.97Show/hide
Query:  MACSSKIIVAAAPRLLLLFP-----HNPLFPFANFGIRASHWSAYEKNQEDQIWPTMVPNHVIHHNPSENYWTPHPETGVFGPPKAHHNSSTVPNDTSAG
        MA S +II+ A+PR LL  P     H+ LFP A F +RASHWSAYEKN E+QIWPT+VP+HVIH N SENYW PHPETGVFGPP AH ++S VPNDTSAG
Subjt:  MACSSKIIVAAAPRLLLLFP-----HNPLFPFANFGIRASHWSAYEKNQEDQIWPTMVPNHVIHHNPSENYWTPHPETGVFGPPKAHHNSSTVPNDTSAG

Query:  GSEGSVLNLKAWFRHNGLEDLEKP
        G E SVL++KAWFRHNGLEDLEKP
Subjt:  GSEGSVLNLKAWFRHNGLEDLEKP

TrEMBL top hitse value%identityAlignment
A0A0A0KRJ5 Uncharacterized protein2.3e-5584.8Show/hide
Query:  MACSSKIIVAAA---PRLLLLFPHNPLFPFANFGIRASHWSAYEKNQEDQIWPTMVPNHVIHHNPSENYWTPHPETGVFGPPKAHHNSSTVPNDTSAGGS
        MACSSKIIVAAA   PRL LL PH  LFPF NFG R+SHWSAYEKNQEDQIWPTMVPNH+I  + SE+YW PHPETGVFGPPKAHHNSSTVPNDTSAGG+
Subjt:  MACSSKIIVAAA---PRLLLLFPHNPLFPFANFGIRASHWSAYEKNQEDQIWPTMVPNHVIHHNPSENYWTPHPETGVFGPPKAHHNSSTVPNDTSAGGS

Query:  EGSVLNLKAWFRHNGLEDLEKPHSL
        EGSVLNLKAWFRHNGLEDLEKPH+L
Subjt:  EGSVLNLKAWFRHNGLEDLEKPHSL

A0A1S4E6U6 uncharacterized protein LOC1035046941.1e-5283.2Show/hide
Query:  SSKIIV-----AAAPRLLLLFPHNP-LFPFANFGIRASHWSAYEKNQEDQIWPTMVPNHVIHHNPSENYWTPHPETGVFGPPKAHHNSSTVPNDTSAGGS
        +SKIIV     AAAPRL LL  H+P LFPFAN G RASHWSAYEKNQED IWPTMVPN VIHHN S+NYW PHP+TGVFGPPKAHHNSST+PNDTSAGG+
Subjt:  SSKIIV-----AAAPRLLLLFPHNP-LFPFANFGIRASHWSAYEKNQEDQIWPTMVPNHVIHHNPSENYWTPHPETGVFGPPKAHHNSSTVPNDTSAGGS

Query:  EGSVLNLKAWFRHNGLEDLEKPHSL
        EGSVLNLKAWFRHNGLEDLEKPHSL
Subjt:  EGSVLNLKAWFRHNGLEDLEKPHSL

A0A5A7UIY1 Uncharacterized protein4.8e-5382.95Show/hide
Query:  MACSSKIIV-----AAAPRLLLLFPHNP-LFPFANFGIRASHWSAYEKNQEDQIWPTMVPNHVIHHNPSENYWTPHPETGVFGPPKAHHNSSTVPNDTSA
        MACSSKIIV     AAAPRL LL  H+P LFPFAN G RASHWSAYEKNQED IWPTMVPN VIHHN S+NYW PHP+TGVFGPPKAHH+SST+PNDTSA
Subjt:  MACSSKIIV-----AAAPRLLLLFPHNP-LFPFANFGIRASHWSAYEKNQEDQIWPTMVPNHVIHHNPSENYWTPHPETGVFGPPKAHHNSSTVPNDTSA

Query:  GGSE-GSVLNLKAWFRHNGLEDLEKPHSL
        GG+E GSVLNLKAWFRHNGLEDLEKPHSL
Subjt:  GGSE-GSVLNLKAWFRHNGLEDLEKPHSL

A0A6J1H0D3 late embryogenesis abundant protein At5g17165-like3.9e-2658.97Show/hide
Query:  MACSSKIIVAAAPRLLLLFPHNPLFPFAN--FGIRASHWSAYEKNQEDQIWPTMVPNHVIHHNPSENYWTPHPETGVFGPPKAHHNSSTVPNDTSAGGS-
        MA +S +I+AA PRL  L   NPL   +   F +RA HWSAYEKN E+++ PT+VP+H+I H+ SE+YW PHP+TGVFGPP   HN   VP+DTSAGG+ 
Subjt:  MACSSKIIVAAAPRLLLLFPHNPLFPFAN--FGIRASHWSAYEKNQEDQIWPTMVPNHVIHHNPSENYWTPHPETGVFGPPKAHHNSSTVPNDTSAGGS-

Query:  EGSVLNLKAWFRHNGLE
        EGSVL LK WFRH  LE
Subjt:  EGSVLNLKAWFRHNGLE

A0A6J1K564 late embryogenesis abundant protein At5g17165-like5.7e-3060.48Show/hide
Query:  MACSSKIIVAAAPRLL-LLFPHNPLFPFANFGIRASHWSAYEKNQEDQIWPTMVPNHVIHHNPSENYWTPHPETGVFGPPKAHHNSSTVPNDTSAGGS-E
        MA +S +I+AA PRL  L  P   L P + F +RA HWSAYEKN E+++ PT+VP+H+I H+ SE+YW PHP+TGVFGPP + HN   VP+DTSAGG+ E
Subjt:  MACSSKIIVAAAPRLL-LLFPHNPLFPFANFGIRASHWSAYEKNQEDQIWPTMVPNHVIHHNPSENYWTPHPETGVFGPPKAHHNSSTVPNDTSAGGS-E

Query:  GSVLNLKAWFRHNGLEDLEKPHSL
        GSVL LK WFRH  LED EKPH L
Subjt:  GSVLNLKAWFRHNGLEDLEKPHSL

SwissProt top hitse value%identityAlignment
F4KFM8 Late embryogenesis abundant protein At5g171655.4e-1749.45Show/hide
Query:  FGIRASHWSAYEKNQEDQIWPTMVPNHVIHHNPSENYWTPHPETGVFGPPKAHHNSSTVPNDTSAGGSEGSVLNLKAWFRHNGLEDLEKPH
        F  R  H SAY+KN E+++ P+ VP+ +I  + S+ YW+PHP+TGVFGP     +SST   D   GG E SV+  KAWFR   LEDL+K H
Subjt:  FGIRASHWSAYEKNQEDQIWPTMVPNHVIHHNPSENYWTPHPETGVFGPPKAHHNSSTVPNDTSAGGSEGSVLNLKAWFRHNGLEDLEKPH

Arabidopsis top hitse value%identityAlignment
AT3G03150.1 unknown protein9.7e-1442.05Show/hide
Query:  RASHWSAYEKNQEDQIWPTMVPNHVIHHNPSENYWTPHPETGVFGPPKAHHNSSTVPNDTSAGGSEGSVLNLKAWFRHNGLEDLEKPH
        R+ H SAY+KN ED++  + VP+ VI  + S+ YW+PHP+TGVFGP    H+++           + +VL   AWFR   LED +K H
Subjt:  RASHWSAYEKNQEDQIWPTMVPNHVIHHNPSENYWTPHPETGVFGPPKAHHNSSTVPNDTSAGGSEGSVLNLKAWFRHNGLEDLEKPH

AT5G17165.1 unknown protein3.8e-1849.45Show/hide
Query:  FGIRASHWSAYEKNQEDQIWPTMVPNHVIHHNPSENYWTPHPETGVFGPPKAHHNSSTVPNDTSAGGSEGSVLNLKAWFRHNGLEDLEKPH
        F  R  H SAY+KN E+++ P+ VP+ +I  + S+ YW+PHP+TGVFGP     +SST   D   GG E SV+  KAWFR   LEDL+K H
Subjt:  FGIRASHWSAYEKNQEDQIWPTMVPNHVIHHNPSENYWTPHPETGVFGPPKAHHNSSTVPNDTSAGGSEGSVLNLKAWFRHNGLEDLEKPH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTGCAGTTCGAAGATTATTGTTGCTGCTGCTCCACGACTCTTACTATTATTTCCTCACAATCCGCTCTTTCCCTTCGCTAATTTTGGCATCCGGGCAAGTCATTG
GTCAGCATACGAGAAGAACCAAGAGGACCAAATATGGCCCACAATGGTACCAAATCACGTGATCCATCATAATCCATCCGAAAATTACTGGACCCCTCATCCTGAAACCG
GAGTTTTTGGGCCTCCAAAAGCCCACCACAATTCTTCAACAGTTCCGAACGACACGTCGGCTGGTGGTAGTGAGGGTTCTGTTCTAAACCTCAAGGCTTGGTTCCGACAT
AACGGCCTTGAAGACCTCGAGAAACCACACTCTCTCTAA
mRNA sequenceShow/hide mRNA sequence
TAAAAATAAATAAGAGAAGAGAAAAAAAAGCATATTTTCATTTTGTGTGTGTTTATATACTTTATATATAAATTGCATCTCACTCCCAAATCCCCCAAATCATTAATAAC
TCCATTGGCATTGGCTTCGCATCAAGCGCTTTGTAATTAAGTACTTAATTTGTGTGTGTTTAATTTGCATGGCCTGCAGTTCGAAGATTATTGTTGCTGCTGCTCCACGA
CTCTTACTATTATTTCCTCACAATCCGCTCTTTCCCTTCGCTAATTTTGGCATCCGGGCAAGTCATTGGTCAGCATACGAGAAGAACCAAGAGGACCAAATATGGCCCAC
AATGGTACCAAATCACGTGATCCATCATAATCCATCCGAAAATTACTGGACCCCTCATCCTGAAACCGGAGTTTTTGGGCCTCCAAAAGCCCACCACAATTCTTCAACAG
TTCCGAACGACACGTCGGCTGGTGGTAGTGAGGGTTCTGTTCTAAACCTCAAGGCTTGGTTCCGACATAACGGCCTTGAAGACCTCGAGAAACCACACTCTCTCTAATTT
GGACCTTTATGATATGATGATTAGAAGATAATGAATAATATTTTGGCACACATGAATACTAATTATTAAGTTTGCATGTATTCCACTAAGAGCAACTTTATATGATATAT
TTTTATTTTATGAATATGTTGATATGTTGTATGTTTGGATTGAGGGTTGTGTTTTTAATTTCGCGTTGTATTGTAATGAATTACATGAATTTGGTAATCAAAATGTTGCC
AATGTTAGTATTATTGTGTACTTTTATCCCTCTTTGCCATACATTATGAATAAGAGTATAGATACATGTTTGTATATTGCAATTA
Protein sequenceShow/hide protein sequence
MACSSKIIVAAAPRLLLLFPHNPLFPFANFGIRASHWSAYEKNQEDQIWPTMVPNHVIHHNPSENYWTPHPETGVFGPPKAHHNSSTVPNDTSAGGSEGSVLNLKAWFRH
NGLEDLEKPHSL