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PI0028461 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028461
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr10:14512618..14513004
RNA-Seq ExpressionPI0028461
SyntenyPI0028461
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034013.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.3e-4268.75Show/hide
Query:  MRQTQSGTGDVSPMMMMLAFGTRYYDLGVGQSSDFGTGYYNSDASSSSSNFGQGYYDLGTDPSSAYMHGHGRGRGEHNEYLYYKPPAAVTEQPDE-----
        M QTQS    VSP+MMM  FGT YYD GVGQSSDFG GYYNS+A  SS++FGQ YYDLG+DPSS+YMHGHGRGRGEHNEYLYY+ PAAV EQ +E     
Subjt:  MRQTQSGTGDVSPMMMMLAFGTRYYDLGVGQSSDFGTGYYNSDASSSSSNFGQGYYDLGTDPSSAYMHGHGRGRGEHNEYLYYKPPAAVTEQPDE-----

Query:  -----------QQQENQEGLEQQRVQGRRRQPARNRRCPGCGTH
                   QQQENQE ++QQRVQ RRRQPARNRR PGCGTH
Subjt:  -----------QQQENQEGLEQQRVQGRRRQPARNRRCPGCGTH

KAA0036767.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]8.3e-4268.06Show/hide
Query:  MRQTQSGTGDVSPMMMMLAFGTRYYDLGVGQSSDFGTGYYNSDASSSSSNFGQGYYDLGTDPSSAYMHGHGRGRGEHNEYLYYKPPAAVTEQPDE-----
        M QTQS    VSP+MMM  FGT YYD GVGQSSDFG GYYNS A  SS++FGQ YYDLG+DPSS+YMHGHGRGRG+HNEYLYY+ PAAV EQ DE     
Subjt:  MRQTQSGTGDVSPMMMMLAFGTRYYDLGVGQSSDFGTGYYNSDASSSSSNFGQGYYDLGTDPSSAYMHGHGRGRGEHNEYLYYKPPAAVTEQPDE-----

Query:  -----------QQQENQEGLEQQRVQGRRRQPARNRRCPGCGTH
                   QQQEN E ++QQRVQ RRRQPARNRR PGCGTH
Subjt:  -----------QQQENQEGLEQQRVQGRRRQPARNRRCPGCGTH

KAA0055624.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]9.8e-4368.75Show/hide
Query:  MRQTQSGTGDVSPMMMMLAFGTRYYDLGVGQSSDFGTGYYNSDASSSSSNFGQGYYDLGTDPSSAYMHGHGRGRGEHNEYLYYKPPAAVTEQPDE-----
        M QT+S    VSP+MMM  FGT YYD GVGQSSDFG GYYNS+A  SS++FGQ YYDLG+DPSS+YMHGHGRGRGEHNEYLYY+ PAAV EQ DE     
Subjt:  MRQTQSGTGDVSPMMMMLAFGTRYYDLGVGQSSDFGTGYYNSDASSSSSNFGQGYYDLGTDPSSAYMHGHGRGRGEHNEYLYYKPPAAVTEQPDE-----

Query:  -----------QQQENQEGLEQQRVQGRRRQPARNRRCPGCGTH
                   QQQENQE ++QQRVQ RRRQPARNRR PGCGTH
Subjt:  -----------QQQENQEGLEQQRVQGRRRQPARNRRCPGCGTH

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]8.3e-4268.06Show/hide
Query:  MRQTQSGTGDVSPMMMMLAFGTRYYDLGVGQSSDFGTGYYNSDASSSSSNFGQGYYDLGTDPSSAYMHGHGRGRGEHNEYLYYKPPAAVTEQPDE-----
        M QTQS    VSP+MMM  FGT YYD GVGQSSDFG GYYNS A  SS++FGQ YYDLG+DPSS+YMHGHGRGRG+HNEYLYY+ PAAV EQ DE     
Subjt:  MRQTQSGTGDVSPMMMMLAFGTRYYDLGVGQSSDFGTGYYNSDASSSSSNFGQGYYDLGTDPSSAYMHGHGRGRGEHNEYLYYKPPAAVTEQPDE-----

Query:  -----------QQQENQEGLEQQRVQGRRRQPARNRRCPGCGTH
                   QQQEN E ++QQRVQ RRRQPARNRR PGCGTH
Subjt:  -----------QQQENQEGLEQQRVQGRRRQPARNRRCPGCGTH

TYK18891.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.7e-4269.01Show/hide
Query:  QTQSGTGDVSPMMMMLAFGTRYYDLGVGQSSDFGTGYYNSDASSSSSNFGQGYYDLGTDPSSAYMHGHGRGRGEHNEYLYYKPPAAVTEQPDE-------
        QTQS    VSP+MMM  FGT YYD GVGQSSDFG GYYNS+A  SS++FGQ YYDLG+DPSS+YMHGHGRGRGEHNEYLYY+ PAAV EQ +E       
Subjt:  QTQSGTGDVSPMMMMLAFGTRYYDLGVGQSSDFGTGYYNSDASSSSSNFGQGYYDLGTDPSSAYMHGHGRGRGEHNEYLYYKPPAAVTEQPDE-------

Query:  ---------QQQENQEGLEQQRVQGRRRQPARNRRCPGCGTH
                 QQQENQE ++QQRVQ RRRQPARNRR PGCGTH
Subjt:  ---------QQQENQEGLEQQRVQGRRRQPARNRRCPGCGTH

TrEMBL top hitse value%identityAlignment
A0A5A7SU33 Serine/threonine-protein phosphatase 7 long form-like protein6.2e-4368.75Show/hide
Query:  MRQTQSGTGDVSPMMMMLAFGTRYYDLGVGQSSDFGTGYYNSDASSSSSNFGQGYYDLGTDPSSAYMHGHGRGRGEHNEYLYYKPPAAVTEQPDE-----
        M QTQS    VSP+MMM  FGT YYD GVGQSSDFG GYYNS+A  SS++FGQ YYDLG+DPSS+YMHGHGRGRGEHNEYLYY+ PAAV EQ +E     
Subjt:  MRQTQSGTGDVSPMMMMLAFGTRYYDLGVGQSSDFGTGYYNSDASSSSSNFGQGYYDLGTDPSSAYMHGHGRGRGEHNEYLYYKPPAAVTEQPDE-----

Query:  -----------QQQENQEGLEQQRVQGRRRQPARNRRCPGCGTH
                   QQQENQE ++QQRVQ RRRQPARNRR PGCGTH
Subjt:  -----------QQQENQEGLEQQRVQGRRRQPARNRRCPGCGTH

A0A5A7T598 Serine/threonine-protein phosphatase 7 long form-like protein4.0e-4268.06Show/hide
Query:  MRQTQSGTGDVSPMMMMLAFGTRYYDLGVGQSSDFGTGYYNSDASSSSSNFGQGYYDLGTDPSSAYMHGHGRGRGEHNEYLYYKPPAAVTEQPDE-----
        M QTQS    VSP+MMM  FGT YYD GVGQSSDFG GYYNS A  SS++FGQ YYDLG+DPSS+YMHGHGRGRG+HNEYLYY+ PAAV EQ DE     
Subjt:  MRQTQSGTGDVSPMMMMLAFGTRYYDLGVGQSSDFGTGYYNSDASSSSSNFGQGYYDLGTDPSSAYMHGHGRGRGEHNEYLYYKPPAAVTEQPDE-----

Query:  -----------QQQENQEGLEQQRVQGRRRQPARNRRCPGCGTH
                   QQQEN E ++QQRVQ RRRQPARNRR PGCGTH
Subjt:  -----------QQQENQEGLEQQRVQGRRRQPARNRRCPGCGTH

A0A5A7UKC7 Serine/threonine-protein phosphatase 7 long form-like protein4.8e-4368.75Show/hide
Query:  MRQTQSGTGDVSPMMMMLAFGTRYYDLGVGQSSDFGTGYYNSDASSSSSNFGQGYYDLGTDPSSAYMHGHGRGRGEHNEYLYYKPPAAVTEQPDE-----
        M QT+S    VSP+MMM  FGT YYD GVGQSSDFG GYYNS+A  SS++FGQ YYDLG+DPSS+YMHGHGRGRGEHNEYLYY+ PAAV EQ DE     
Subjt:  MRQTQSGTGDVSPMMMMLAFGTRYYDLGVGQSSDFGTGYYNSDASSSSSNFGQGYYDLGTDPSSAYMHGHGRGRGEHNEYLYYKPPAAVTEQPDE-----

Query:  -----------QQQENQEGLEQQRVQGRRRQPARNRRCPGCGTH
                   QQQENQE ++QQRVQ RRRQPARNRR PGCGTH
Subjt:  -----------QQQENQEGLEQQRVQGRRRQPARNRRCPGCGTH

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein4.0e-4268.06Show/hide
Query:  MRQTQSGTGDVSPMMMMLAFGTRYYDLGVGQSSDFGTGYYNSDASSSSSNFGQGYYDLGTDPSSAYMHGHGRGRGEHNEYLYYKPPAAVTEQPDE-----
        M QTQS    VSP+MMM  FGT YYD GVGQSSDFG GYYNS A  SS++FGQ YYDLG+DPSS+YMHGHGRGRG+HNEYLYY+ PAAV EQ DE     
Subjt:  MRQTQSGTGDVSPMMMMLAFGTRYYDLGVGQSSDFGTGYYNSDASSSSSNFGQGYYDLGTDPSSAYMHGHGRGRGEHNEYLYYKPPAAVTEQPDE-----

Query:  -----------QQQENQEGLEQQRVQGRRRQPARNRRCPGCGTH
                   QQQEN E ++QQRVQ RRRQPARNRR PGCGTH
Subjt:  -----------QQQENQEGLEQQRVQGRRRQPARNRRCPGCGTH

A0A5D3D5R5 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.8e-4269.01Show/hide
Query:  QTQSGTGDVSPMMMMLAFGTRYYDLGVGQSSDFGTGYYNSDASSSSSNFGQGYYDLGTDPSSAYMHGHGRGRGEHNEYLYYKPPAAVTEQPDE-------
        QTQS    VSP+MMM  FGT YYD GVGQSSDFG GYYNS+A  SS++FGQ YYDLG+DPSS+YMHGHGRGRGEHNEYLYY+ PAAV EQ +E       
Subjt:  QTQSGTGDVSPMMMMLAFGTRYYDLGVGQSSDFGTGYYNSDASSSSSNFGQGYYDLGTDPSSAYMHGHGRGRGEHNEYLYYKPPAAVTEQPDE-------

Query:  ---------QQQENQEGLEQQRVQGRRRQPARNRRCPGCGTH
                 QQQENQE ++QQRVQ RRRQPARNRR PGCGTH
Subjt:  ---------QQQENQEGLEQQRVQGRRRQPARNRRCPGCGTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACAAACACAAAGTGGGACTGGTGACGTTAGTCCAATGATGATGATGCTGGCATTTGGAACGAGATATTATGATTTAGGAGTCGGTCAATCATCAGACTTCGGGAC
AGGATATTATAATTCAGATGCAAGTTCATCATCATCAAACTTTGGACAAGGATACTACGATTTAGGGACCGATCCATCATCTGCATACATGCATGGACATGGACGTGGTC
GTGGAGAACATAACGAATATTTATACTACAAACCGCCTGCAGCGGTAACCGAGCAGCCAGATGAGCAACAACAAGAGAATCAGGAGGGACTAGAGCAACAAAGAGTGCAG
GGTCGACGACGGCAACCAGCTAGAAATCGGCGATGTCCAGGTTGTGGAACACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGACAAACACAAAGTGGGACTGGTGACGTTAGTCCAATGATGATGATGCTGGCATTTGGAACGAGATATTATGATTTAGGAGTCGGTCAATCATCAGACTTCGGGAC
AGGATATTATAATTCAGATGCAAGTTCATCATCATCAAACTTTGGACAAGGATACTACGATTTAGGGACCGATCCATCATCTGCATACATGCATGGACATGGACGTGGTC
GTGGAGAACATAACGAATATTTATACTACAAACCGCCTGCAGCGGTAACCGAGCAGCCAGATGAGCAACAACAAGAGAATCAGGAGGGACTAGAGCAACAAAGAGTGCAG
GGTCGACGACGGCAACCAGCTAGAAATCGGCGATGTCCAGGTTGTGGAACACATTGA
Protein sequenceShow/hide protein sequence
MRQTQSGTGDVSPMMMMLAFGTRYYDLGVGQSSDFGTGYYNSDASSSSSNFGQGYYDLGTDPSSAYMHGHGRGRGEHNEYLYYKPPAAVTEQPDEQQQENQEGLEQQRVQ
GRRRQPARNRRCPGCGTH