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PI0028521 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028521
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr07:16205436..16206861
RNA-Seq ExpressionPI0028521
SyntenyPI0028521
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0016779 - nucleotidyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038397.1 hypothetical protein E6C27_scaffold270G002870 [Cucumis melo var. makuwa]7.4e-1841.18Show/hide
Query:  LDMMASNNEEWDGDDFGNR------RGGRGRSEEGLDKNIVVALQGKMTAMNNPLKSMARSQ--------QLHIN-------------------------
        LD MAS + EW  D FG+R      RG RGR  + +D+N++V LQG++T MN  L+SMA SQ        Q++ N                         
Subjt:  LDMMASNNEEWDGDDFGNR------RGGRGRSEEGLDKNIVVALQGKMTAMNNPLKSMARSQ--------QLHIN-------------------------

Query:  ---------------IPFIDGLEQMSSYVKFLQDILAKKRRMNDCETVALTQATSNVFKNGVPGEDDRSW
                       IPF++ L+QM  YVKFL+DILAKKR++ND E VA TQA SNVFKNGV  + +RSW
Subjt:  ---------------IPFIDGLEQMSSYVKFLQDILAKKRRMNDCETVALTQATSNVFKNGVPGEDDRSW

KAA0044261.1 uncharacterized protein E6C27_scaffold2741G00190 [Cucumis melo var. makuwa]1.3e-1444.78Show/hide
Query:  EWDGDDFG---NRRGGRGRS---EEGLDKNIVVALQGKMTAMNNPLKSM---------------ARSQQLHINI-------------PFIDGLEQMSSYV
        EW  D FG     RG RG +   +EG+D+N  V LQGK+  MN  L+SM                R  + H  +             PF   LE+M SYV
Subjt:  EWDGDDFG---NRRGGRGRS---EEGLDKNIVVALQGKMTAMNNPLKSM---------------ARSQQLHINI-------------PFIDGLEQMSSYV

Query:  KFLQDILAKKRRMNDCETVALTQATSNVFKNGVP
        KFL+DIL KKRR+N+CETV LTQATSNV KNG+P
Subjt:  KFLQDILAKKRRMNDCETVALTQATSNVFKNGVP

KGN44484.1 hypothetical protein Csa_015918 [Cucumis sativus]1.9e-1353.41Show/hide
Query:  GMLKSSYNQINATLDMMASNNEEWDGDDFGNRRGGRGRSEEGLDKNIVVALQGKMTAMNNPLKSMARSQQLHINIPFIDGLEQMSSYV
        GML+SSYNQI ATLD M++N++EWD   FG+R   RGR++EGLDK++VV LQG+M AMNN L+SM  SQ    N  +I  ++Q++ ++
Subjt:  GMLKSSYNQINATLDMMASNNEEWDGDDFGNRRGGRGRSEEGLDKNIVVALQGKMTAMNNPLKSMARSQQLHINIPFIDGLEQMSSYV

TYJ96997.1 hypothetical protein E5676_scaffold506G00470 [Cucumis melo var. makuwa]1.7e-1741.18Show/hide
Query:  LDMMASNNEEWDGDDFGNR------RGGRGRSEEGLDKNIVVALQGKMTAMNNPLKSMARSQ--------QLHIN-------------------------
        LD MAS + EW  D FG+R      RG RGR  + +D+N++V LQG++T MN  L+SMA SQ        Q++ N                         
Subjt:  LDMMASNNEEWDGDDFGNR------RGGRGRSEEGLDKNIVVALQGKMTAMNNPLKSMARSQ--------QLHIN-------------------------

Query:  ---------------IPFIDGLEQMSSYVKFLQDILAKKRRMNDCETVALTQATSNVFKNGVPGEDDRSW
                       IPF++ L+QM  YVKFL+DILAKKR++ND E VA TQA SNVFKNGV  + +RSW
Subjt:  ---------------IPFIDGLEQMSSYVKFLQDILAKKRRMNDCETVALTQATSNVFKNGVPGEDDRSW

XP_016902557.1 PREDICTED: uncharacterized protein LOC107991723 [Cucumis melo]2.2e-1764.37Show/hide
Query:  KNIVVALQGKMTAMNNPLKSMARSQQLHINIPFIDGLEQMSSYVKFLQDILAKKRRMNDCETVALTQATSNVFKNGVPGE--DDRSW
        +N +VALQG++  MN  LKSMA S QLHINI F+D L QM SYVKFL+DILAKK R+ND +TVAL Q TS+VF+NGVP +  D RS+
Subjt:  KNIVVALQGKMTAMNNPLKSMARSQQLHINIPFIDGLEQMSSYVKFLQDILAKKRRMNDCETVALTQATSNVFKNGVPGE--DDRSW

TrEMBL top hitse value%identityAlignment
A0A0A0K6F9 Uncharacterized protein9.2e-1453.41Show/hide
Query:  GMLKSSYNQINATLDMMASNNEEWDGDDFGNRRGGRGRSEEGLDKNIVVALQGKMTAMNNPLKSMARSQQLHINIPFIDGLEQMSSYV
        GML+SSYNQI ATLD M++N++EWD   FG+R   RGR++EGLDK++VV LQG+M AMNN L+SM  SQ    N  +I  ++Q++ ++
Subjt:  GMLKSSYNQINATLDMMASNNEEWDGDDFGNRRGGRGRSEEGLDKNIVVALQGKMTAMNNPLKSMARSQQLHINIPFIDGLEQMSSYV

A0A1S4E2V6 uncharacterized protein LOC1079917231.0e-1764.37Show/hide
Query:  KNIVVALQGKMTAMNNPLKSMARSQQLHINIPFIDGLEQMSSYVKFLQDILAKKRRMNDCETVALTQATSNVFKNGVPGE--DDRSW
        +N +VALQG++  MN  LKSMA S QLHINI F+D L QM SYVKFL+DILAKK R+ND +TVAL Q TS+VF+NGVP +  D RS+
Subjt:  KNIVVALQGKMTAMNNPLKSMARSQQLHINIPFIDGLEQMSSYVKFLQDILAKKRRMNDCETVALTQATSNVFKNGVPGE--DDRSW

A0A5A7T9Z8 Uncharacterized protein3.6e-1841.18Show/hide
Query:  LDMMASNNEEWDGDDFGNR------RGGRGRSEEGLDKNIVVALQGKMTAMNNPLKSMARSQ--------QLHIN-------------------------
        LD MAS + EW  D FG+R      RG RGR  + +D+N++V LQG++T MN  L+SMA SQ        Q++ N                         
Subjt:  LDMMASNNEEWDGDDFGNR------RGGRGRSEEGLDKNIVVALQGKMTAMNNPLKSMARSQ--------QLHIN-------------------------

Query:  ---------------IPFIDGLEQMSSYVKFLQDILAKKRRMNDCETVALTQATSNVFKNGVPGEDDRSW
                       IPF++ L+QM  YVKFL+DILAKKR++ND E VA TQA SNVFKNGV  + +RSW
Subjt:  ---------------IPFIDGLEQMSSYVKFLQDILAKKRRMNDCETVALTQATSNVFKNGVPGEDDRSW

A0A5A7TRQ0 Uncharacterized protein6.4e-1544.78Show/hide
Query:  EWDGDDFG---NRRGGRGRS---EEGLDKNIVVALQGKMTAMNNPLKSM---------------ARSQQLHINI-------------PFIDGLEQMSSYV
        EW  D FG     RG RG +   +EG+D+N  V LQGK+  MN  L+SM                R  + H  +             PF   LE+M SYV
Subjt:  EWDGDDFG---NRRGGRGRS---EEGLDKNIVVALQGKMTAMNNPLKSM---------------ARSQQLHINI-------------PFIDGLEQMSSYV

Query:  KFLQDILAKKRRMNDCETVALTQATSNVFKNGVP
        KFL+DIL KKRR+N+CETV LTQATSNV KNG+P
Subjt:  KFLQDILAKKRRMNDCETVALTQATSNVFKNGVP

A0A5D3BCZ6 Uncharacterized protein8.0e-1841.18Show/hide
Query:  LDMMASNNEEWDGDDFGNR------RGGRGRSEEGLDKNIVVALQGKMTAMNNPLKSMARSQ--------QLHIN-------------------------
        LD MAS + EW  D FG+R      RG RGR  + +D+N++V LQG++T MN  L+SMA SQ        Q++ N                         
Subjt:  LDMMASNNEEWDGDDFGNR------RGGRGRSEEGLDKNIVVALQGKMTAMNNPLKSMARSQ--------QLHIN-------------------------

Query:  ---------------IPFIDGLEQMSSYVKFLQDILAKKRRMNDCETVALTQATSNVFKNGVPGEDDRSW
                       IPF++ L+QM  YVKFL+DILAKKR++ND E VA TQA SNVFKNGV  + +RSW
Subjt:  ---------------IPFIDGLEQMSSYVKFLQDILAKKRRMNDCETVALTQATSNVFKNGVPGEDDRSW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGCCAAAGTTGGCACGAATGTCAGACAGGACACCTGCGGCGCAGTTGCAGCTTTGTCAGAAGACTTAATTACCGTCCAGTGTCCTGTCACATCACACCTCGCCTA
TAAATATCGACAATCTTCTCAGTTGCGAGCATGCAAAAATTTGAAGAGCAAGTTCTATTCCTCCATTCCTTTCCTTCTGTCTAGGGGTATGTTGAAAAGTTCATACAACC
AGATCAATGCGACACTGGATATGATGGCCAGCAATAATGAAGAATGGGATGGAGATGATTTCGGCAATCGTAGAGGAGGAAGAGGAAGAAGCGAGGAAGGATTAGACAAG
AACATCGTGGTGGCCTTGCAAGGAAAAATGACTGCAATGAACAATCCGTTGAAATCAATGGCAAGATCGCAGCAACTTCACATCAACATCCCGTTTATTGATGGGTTAGA
GCAAATGTCTTCTTATGTCAAGTTCTTGCAAGACATCTTGGCAAAGAAAAGAAGGATGAACGATTGCGAAACAGTGGCTCTAACACAGGCAACAAGCAACGTCTTCAAAA
ATGGGGTGCCCGGGGAAGATGACAGATCTTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGGCCAAAGTTGGCACGAATGTCAGACAGGACACCTGCGGCGCAGTTGCAGCTTTGTCAGAAGACTTAATTACCGTCCAGTGTCCTGTCACATCACACCTCGCCTA
TAAATATCGACAATCTTCTCAGTTGCGAGCATGCAAAAATTTGAAGAGCAAGTTCTATTCCTCCATTCCTTTCCTTCTGTCTAGGGGTATGTTGAAAAGTTCATACAACC
AGATCAATGCGACACTGGATATGATGGCCAGCAATAATGAAGAATGGGATGGAGATGATTTCGGCAATCGTAGAGGAGGAAGAGGAAGAAGCGAGGAAGGATTAGACAAG
AACATCGTGGTGGCCTTGCAAGGAAAAATGACTGCAATGAACAATCCGTTGAAATCAATGGCAAGATCGCAGCAACTTCACATCAACATCCCGTTTATTGATGGGTTAGA
GCAAATGTCTTCTTATGTCAAGTTCTTGCAAGACATCTTGGCAAAGAAAAGAAGGATGAACGATTGCGAAACAGTGGCTCTAACACAGGCAACAAGCAACGTCTTCAAAA
ATGGGGTGCCCGGGGAAGATGACAGATCTTGGTAG
Protein sequenceShow/hide protein sequence
MVAKVGTNVRQDTCGAVAALSEDLITVQCPVTSHLAYKYRQSSQLRACKNLKSKFYSSIPFLLSRGMLKSSYNQINATLDMMASNNEEWDGDDFGNRRGGRGRSEEGLDK
NIVVALQGKMTAMNNPLKSMARSQQLHINIPFIDGLEQMSSYVKFLQDILAKKRRMNDCETVALTQATSNVFKNGVPGEDDRSW