; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0028557 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028557
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1
Genome locationchr11:20837982..20845232
RNA-Seq ExpressionPI0028557
SyntenyPI0028557
Gene Ontology termsGO:0000741 - karyogamy (biological process)
InterPro domainsIPR033251 - Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial
IPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN63196.1 hypothetical protein Csa_022217 [Cucumis sativus]5.8e-4096.7Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPTSPFRMATNKPLSHRAFRCAPEMSFCLESMMPFHSVSSSALMISMLSISRHSCGWLPEG
        MASIGARSAFRSFSGSARRAAAHIGSQPKPSP+SPFRMATNKPLSHR FRCAPEMSFCLESMMPFHSVSSSALM SMLSISRHSCGWLPEG
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPTSPFRMATNKPLSHRAFRCAPEMSFCLESMMPFHSVSSSALMISMLSISRHSCGWLPEG

XP_011649972.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X2 [Cucumis sativus]4.3e-4396.88Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPTSPFRMATNKPLSHRAFRCAPEMSFCLESMMPFHSVSSSALMISMLSISRHSCGWLPEGKDKTR
        MASIGARSAFRSFSGSARRAAAHIGSQPKPSP+SPFRMATNKPLSHR FRCAPEMSFCLESMMPFHSVSSSALM SMLSISRHSCGWLPEGKDKTR
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPTSPFRMATNKPLSHRAFRCAPEMSFCLESMMPFHSVSSSALMISMLSISRHSCGWLPEGKDKTR

XP_011649974.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X2 [Cucumis sativus]3.1e-4194.79Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPTSPFRMATNKPLSHRAFRCAPEMSFCLESMMPFHSVSSSALMISMLSISRHSCGWLPEGKDKTR
        MASIGARSAFRSFSGSARRAAAHIGSQPK S +SPFRMATNKPLSHR FRCAPEMSFCLESMMPFHSVSSSALM SMLSISRHSCGWLPEGKDKTR
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPTSPFRMATNKPLSHRAFRCAPEMSFCLESMMPFHSVSSSALMISMLSISRHSCGWLPEGKDKTR

XP_016901844.1 PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucumis melo]2.0e-4093.75Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPTSPFRMATNKPLSHRAFRCAPEMSFCLESMMPFHSVSSSALMISMLSISRHSCGWLPEGKDKTR
        MASIGARSAFRSFSGSARRAAAHIGSQPKPS TSPFRMATNKP SH  FRCAP MSFCLESMMPFHSVSSSALM SMLSISRHSCGWLPEGKDKTR
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPTSPFRMATNKPLSHRAFRCAPEMSFCLESMMPFHSVSSSALMISMLSISRHSCGWLPEGKDKTR

XP_016901879.1 PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucumis melo]5.3e-4194.79Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPTSPFRMATNKPLSHRAFRCAPEMSFCLESMMPFHSVSSSALMISMLSISRHSCGWLPEGKDKTR
        MASIGARSAFRSFSGSARRAAAHIGSQPKPS TSPFRMATNKPLSH  FRCAP MSFCLESMMPFHSVSSSALM SMLSISRHSCGWLPEGKDKTR
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPTSPFRMATNKPLSHRAFRCAPEMSFCLESMMPFHSVSSSALMISMLSISRHSCGWLPEGKDKTR

TrEMBL top hitse value%identityAlignment
A0A0A0LN06 Uncharacterized protein2.0e-3894.51Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPTSPFRMATNKPLSHRAFRCAPEMSFCLESMMPFHSVSSSALMISMLSISRHSCGWLPEG
        MASIGARSAFRSFSGSARRAAAHIGSQPK S +SPFRMATNKPLSHR FRCAPEMSFCLESMMPFHSVSSSALM SMLSISRHSCGWLPEG
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPTSPFRMATNKPLSHRAFRCAPEMSFCLESMMPFHSVSSSALMISMLSISRHSCGWLPEG

A0A0A0LT36 Uncharacterized protein2.8e-4096.7Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPTSPFRMATNKPLSHRAFRCAPEMSFCLESMMPFHSVSSSALMISMLSISRHSCGWLPEG
        MASIGARSAFRSFSGSARRAAAHIGSQPKPSP+SPFRMATNKPLSHR FRCAPEMSFCLESMMPFHSVSSSALM SMLSISRHSCGWLPEG
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPTSPFRMATNKPLSHRAFRCAPEMSFCLESMMPFHSVSSSALMISMLSISRHSCGWLPEG

A0A1S4E0U8 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X29.7e-4193.75Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPTSPFRMATNKPLSHRAFRCAPEMSFCLESMMPFHSVSSSALMISMLSISRHSCGWLPEGKDKTR
        MASIGARSAFRSFSGSARRAAAHIGSQPKPS TSPFRMATNKP SH  FRCAP MSFCLESMMPFHSVSSSALM SMLSISRHSCGWLPEGKDKTR
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPTSPFRMATNKPLSHRAFRCAPEMSFCLESMMPFHSVSSSALMISMLSISRHSCGWLPEGKDKTR

A0A1S4E0X5 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X32.0e-3893.48Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPTSPFRMATNKPLSHRAFRCAPEMSFCLESMMPFHSVSSSALMISMLSISRHSCGWLPEGK
        MASIGARSAFRSFSGSARRAAAHIGSQPKPS TSPFRMATNKPLSH  FRCAP MSFCLESMMPFHSVSSSALM SMLSISRHSCGWLPEG+
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPTSPFRMATNKPLSHRAFRCAPEMSFCLESMMPFHSVSSSALMISMLSISRHSCGWLPEGK

A0A1S4E0Y3 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X12.6e-4194.79Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPTSPFRMATNKPLSHRAFRCAPEMSFCLESMMPFHSVSSSALMISMLSISRHSCGWLPEGKDKTR
        MASIGARSAFRSFSGSARRAAAHIGSQPKPS TSPFRMATNKPLSH  FRCAP MSFCLESMMPFHSVSSSALM SMLSISRHSCGWLPEGKDKTR
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPTSPFRMATNKPLSHRAFRCAPEMSFCLESMMPFHSVSSSALMISMLSISRHSCGWLPEGKDKTR

SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial1.5e-0643.82Show/hide
Query:  GARSAFRSFSGSARRAAAHIG---SQPKPSPTSPFRMATNKPLSHRAFRCAPEMSFCLESMMPFHSVSSSALMISMLSISRHSCGWLPE
        GARS  R  + S+R AAA  G   SQ K +P   FR    +       R   E+SFC+ES++P+HS ++SALM S LSIS  + GWL +
Subjt:  GARSAFRSFSGSARRAAAHIG---SQPKPSPTSPFRMATNKPLSHRAFRCAPEMSFCLESMMPFHSVSSSALMISMLSISRHSCGWLPE

Arabidopsis top hitse value%identityAlignment
AT1G28395.1 unknown protein2.0e-1445.74Show/hide
Query:  ARSAFRSFSGSARRAAAHIGSQPKPSPTS---PFRMATNKPLSHRAFRCAPEMSFCLESMMPFHSVSSSALMISMLSISRHSCGWLPEGKDKTR
        ARS FRS +  A   A    + PKP P+S    FRM    PL++R FR   E+S C+E+M+P+H+ ++SAL+ SMLS+SR   GW+ +G D+TR
Subjt:  ARSAFRSFSGSARRAAAHIGSQPKPSPTS---PFRMATNKPLSHRAFRCAPEMSFCLESMMPFHSVSSSALMISMLSISRHSCGWLPEGKDKTR

AT1G28395.2 unknown protein2.0e-1445.74Show/hide
Query:  ARSAFRSFSGSARRAAAHIGSQPKPSPTS---PFRMATNKPLSHRAFRCAPEMSFCLESMMPFHSVSSSALMISMLSISRHSCGWLPEGKDKTR
        ARS FRS +  A   A    + PKP P+S    FRM    PL++R FR   E+S C+E+M+P+H+ ++SAL+ SMLS+SR   GW+ +G D+TR
Subjt:  ARSAFRSFSGSARRAAAHIGSQPKPSPTS---PFRMATNKPLSHRAFRCAPEMSFCLESMMPFHSVSSSALMISMLSISRHSCGWLPEGKDKTR

AT1G28395.3 unknown protein2.0e-1445.74Show/hide
Query:  ARSAFRSFSGSARRAAAHIGSQPKPSPTS---PFRMATNKPLSHRAFRCAPEMSFCLESMMPFHSVSSSALMISMLSISRHSCGWLPEGKDKTR
        ARS FRS +  A   A    + PKP P+S    FRM    PL++R FR   E+S C+E+M+P+H+ ++SAL+ SMLS+SR   GW+ +G D+TR
Subjt:  ARSAFRSFSGSARRAAAHIGSQPKPSPTS---PFRMATNKPLSHRAFRCAPEMSFCLESMMPFHSVSSSALMISMLSISRHSCGWLPEGKDKTR

AT1G28395.4 unknown protein9.4e-1245.35Show/hide
Query:  ARSAFRSFSGSARRAAAHIGSQPKPSPTS---PFRMATNKPLSHRAFRCAPEMSFCLESMMPFHSVSSSALMISMLSISRHSCGWL
        ARS FRS +  A   A    + PKP P+S    FRM    PL++R FR   E+S C+E+M+P+H+ ++SAL+ SMLS+SR   GW+
Subjt:  ARSAFRSFSGSARRAAAHIGSQPKPSPTS---PFRMATNKPLSHRAFRCAPEMSFCLESMMPFHSVSSSALMISMLSISRHSCGWL

AT1G28395.5 unknown protein9.4e-1245.35Show/hide
Query:  ARSAFRSFSGSARRAAAHIGSQPKPSPTS---PFRMATNKPLSHRAFRCAPEMSFCLESMMPFHSVSSSALMISMLSISRHSCGWL
        ARS FRS +  A   A    + PKP P+S    FRM    PL++R FR   E+S C+E+M+P+H+ ++SAL+ SMLS+SR   GW+
Subjt:  ARSAFRSFSGSARRAAAHIGSQPKPSPTS---PFRMATNKPLSHRAFRCAPEMSFCLESMMPFHSVSSSALMISMLSISRHSCGWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCAATTGGTGCTCGTTCTGCTTTCCGGTCATTCTCCGGTTCGGCACGCCGTGCTGCTGCTCACATCGGTTCTCAACCCAAGCCCTCACCAACCTCTCCCTTTCG
CATGGCAACTAACAAACCCCTCTCTCATCGTGCTTTCAGGTGTGCGCCTGAGATGAGCTTCTGTTTGGAGTCAATGATGCCATTTCACTCTGTGTCGTCCTCGGCTTTGA
TGATTTCAATGCTCTCTATCTCGCGCCACAGCTGCGGTTGGCTCCCCGAAGGCAAAGACAAGACTAGATGA
mRNA sequenceShow/hide mRNA sequence
CTATTTTTGACAATTTCCCAATACTTATCCAAAGAAAAAAAAAAAACCATTGTAAGAAACCCTAGACCCAAAGCAGGGTTTTAGCTTTAGCCCTCGGCAGCCAGCCAAGA
AGCGAGTGTCAGTTCTCTCTTGTTCATATTCCGAAACCAAGAAGAACAACCTTCGGAATCTATCATTTCTTCTCATAATCAATGGCCTCAATTGGTGCTCGTTCTGCTTT
CCGGTCATTCTCCGGTTCGGCACGCCGTGCTGCTGCTCACATCGGTTCTCAACCCAAGCCCTCACCAACCTCTCCCTTTCGCATGGCAACTAACAAACCCCTCTCTCATC
GTGCTTTCAGGTGTGCGCCTGAGATGAGCTTCTGTTTGGAGTCAATGATGCCATTTCACTCTGTGTCGTCCTCGGCTTTGATGATTTCAATGCTCTCTATCTCGCGCCAC
AGCTGCGGTTGGCTCCCCGAAGGCAAAGACAAGACTAGATGAGGATCGAGAAGCAGGAAGGAATGACTTGATTTGTTTTTTGAGTTTCCCCTTTTAAGTCCTAGCGATGC
TACCTACCCCCATTGGCCCACCCCCAAGACAAAGTAAAGAAAGAAAAAAAGAACATCTATAGTTGATTCCATCAATAGGTTAAATGAGATGATTGTATTTGGAATGAAAT
AATAAACTATGATACTCTAATTCGTTCACTTCGTTTGTAGATGATTGCTTTTAATGTGTTGAAAGATTTTATATTCAATTTTATTCTGCAACTATATTGGACTACAGACT
ACTAGATCGTTGTAGAGTAAGTTTGGCTTCTACATAGTTTAAATATTGTTTTGCAAAGTTTACTTTGTTAATCAAGTATTTGGGTCTGTTGATTTGTTGTTATCTTTTCA
TTTCCACTACTTCATAGAGATGGAAGTTGCAAATTCATATATTACTGTCCATAAGTAGCATGGTAAGAACTTTGAAGTAGTCCGTGGAAAGTTGAAGTCTTCTTTACGAA
TGATACACTGAAACATCCTTTGCTTCCAACTAGAATGAATGTTTTGTAGTTTCCATGACCGAAAATTAGGTCCTAAATTTCCATCTTTCATGTTTAAACTTGGAAAATGT
CAATCTACACATCTCTTTGATGAGCATACTCATCACCTACCAAATTATTCCTTGTTTTGATTAAAATATCAAACTGTCATTAATAACACACTGGTCACTTGTGTTCATCA
GCATGCAATGATGATAAGTGAC
Protein sequenceShow/hide protein sequence
MASIGARSAFRSFSGSARRAAAHIGSQPKPSPTSPFRMATNKPLSHRAFRCAPEMSFCLESMMPFHSVSSSALMISMLSISRHSCGWLPEGKDKTR