; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0028566 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028566
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTransposon Ty3-G Gag-Pol polyprotein
Genome locationchr01:15863365..15865282
RNA-Seq ExpressionPI0028566
SyntenyPI0028566
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038192.1 hypothetical protein E6C27_scaffold270G00250 [Cucumis melo var. makuwa]2.0e-3862.6Show/hide
Query:  STYNQIKTTLDIMASNNEEWDEDDFDNCRGERGRSDEGMDKNVVVVLQGQMTAMNNLLKSMAILQVNVVRSSMLAVNQIDDLGCVGCDGPHNTDACPLNT
        S+YNQI  TLD +A NNEEWD+D FD+ RG RG+++EG+D+NV+VV QGQMTAMNNLL+ M  LQVN   SS  +V Q+D++GC+    PH  DACPLN 
Subjt:  STYNQIKTTLDIMASNNEEWDEDDFDNCRGERGRSDEGMDKNVVVVLQGQMTAMNNLLKSMAILQVNVVRSSMLAVNQIDDLGCVGCDGPHNTDACPLNT

Query:  KTVAFIRNDPYSNTYNPGWRNHPNFGWGRTG
        + VA++++DPYSNTYNP WRNHPNF  GRTG
Subjt:  KTVAFIRNDPYSNTYNPGWRNHPNFGWGRTG

KAA0040852.1 hypothetical protein E6C27_scaffold333G00770 [Cucumis melo var. makuwa]6.3e-4544.4Show/hide
Query:  MLKSTYNQIKTTLDIMASNNEEWDEDDFDNCRGERGRSDEGMDKNVVVVLQGQMTAMNNLLKSMAILQVNVVRSSMLAVNQIDDLGCVGCDGPHNTDACP
        ML+S+Y QIKTTLD + +N++E  +DD       RGR+D GMD+NV+V LQGQ+T M  LL+SMA+ QV+ V + + AV Q+D++  VGC  PH TDAC 
Subjt:  MLKSTYNQIKTTLDIMASNNEEWDEDDFDNCRGERGRSDEGMDKNVVVVLQGQMTAMNNLLKSMAILQVNVVRSSMLAVNQIDDLGCVGCDGPHNTDACP

Query:  LNTKTVAFIRNDPYSNTYNPGWRNHPNFGWGRTGQQNQGRQGGQSGQGDHRREASGYHLRHHNNRPLH--PQHQQQHTTTTPSTSSSMENLLREYMQKND
        LN +  A++++ PYSNTYN                            G++R EA  +  RH+ +RP +  PQHQQ  TT TPS+ SSM  LLR+YMQ+ D
Subjt:  LNTKTVAFIRNDPYSNTYNPGWRNHPNFGWGRTGQQNQGRQGGQSGQGDHRREASGYHLRHHNNRPLH--PQHQQQHTTTTPSTSSSMENLLREYMQKND

Query:  ILLQSQASSIRNLEVQLRQLANHFSGRPQGSIPSNTETRNQAGGSGKEKCQAVTLRSEMNLTIRDPKSNVETQLLIL
          +QSQ +SI NLE+ L QLA  FSGRP GS+PSN E  N   G  K K   +  R E +    D  SN  T  +++
Subjt:  ILLQSQASSIRNLEVQLRQLANHFSGRPQGSIPSNTETRNQAGGSGKEKCQAVTLRSEMNLTIRDPKSNVETQLLIL

KAA0048713.1 hypothetical protein E6C27_scaffold43G00050 [Cucumis melo var. makuwa]1.5e-3034.75Show/hide
Query:  MLKSTYNQIKTTLDIMASNNEEWDEDDFDN------CRGERGRSDEGMDKNVVVVLQGQMTAMNNLLKSMAILQVNVVRSSMLAVNQIDDLGCVGCDGPH
        ML+S+YNQIK  LD MASN++EW ++ F +       +G RGR ++G+D +++V LQGQ+  M N+L+SMA+LQVNVVRSS+  V Q++++GCVGC  PH
Subjt:  MLKSTYNQIKTTLDIMASNNEEWDEDDFDN------CRGERGRSDEGMDKNVVVVLQGQMTAMNNLLKSMAILQVNVVRSSMLAVNQIDDLGCVGCDGPH

Query:  NTDACPLNTKTVAFIRNDPYSNTYNPGWRNHPNFGWGRTGQQNQGRQGGQSGQGDHRREASGYHLRHHNNRPLHPQHQQQHTTTTPSTSSSMENLLREYM
        NT+ACPLNT+ VA+++NDP                                                    P+H     + T                  
Subjt:  NTDACPLNTKTVAFIRNDPYSNTYNPGWRNHPNFGWGRTGQQNQGRQGGQSGQGDHRREASGYHLRHHNNRPLHPQHQQQHTTTTPSTSSSMENLLREYM

Query:  QKNDILLQSQASSIRNLEVQLRQLANHFSGRPQGSIPSNTETRNQAGGSGKEKCQAVTLRSEMNLTIRDPKSNVETQLLILQLRSATQSKDIPNKDMEST
              + SQASSI+N+E+QL QL + FS RP+ S PSNTET NQ                      RDP +N                   PNK+MEST
Subjt:  QKNDILLQSQASSIRNLEVQLRQLANHFSGRPQGSIPSNTETRNQAGGSGKEKCQAVTLRSEMNLTIRDPKSNVETQLLILQLRSATQSKDIPNKDMEST

Query:  RRYEQ
         + EQ
Subjt:  RRYEQ

XP_030509259.1 uncharacterized protein LOC115723937 [Cannabis sativa]2.1e-3235.81Show/hide
Query:  MLKSTYNQIKTTLDIMASNNEEWDEDDFDNCRGERGRSDEGMDKNVVVVLQGQMTAMNNLLKSMAILQVNVVRS-SMLAVNQIDDLGCVGCDGPHNTDAC
        +L  +YN+    L+ +ASNN +W  +     R   G     ++ + +  L  QM +M N+LK+M     N+  S    A  Q  ++ CV C   H  + C
Subjt:  MLKSTYNQIKTTLDIMASNNEEWDEDDFDNCRGERGRSDEGMDKNVVVVLQGQMTAMNNLLKSMAILQVNVVRS-SMLAVNQIDDLGCVGCDGPHNTDAC

Query:  PLNTKTVAFI-------RNDPYSNTYNPGWRNHPNFGWGRTGQQNQGRQGGQSGQGDHRREASGYHLRHHNNRPLHPQHQQQHTTTTPSTSSSMENLLRE
        P N  +V ++        N+PYSN+YNP W++HPNF WG  G  + G Q  Q  Q        G+  +    +P  PQ  Q         +SS+E+L+R+
Subjt:  PLNTKTVAFI-------RNDPYSNTYNPGWRNHPNFGWGRTGQQNQGRQGGQSGQGDHRREASGYHLRHHNNRPLHPQHQQQHTTTTPSTSSSMENLLRE

Query:  YMQKNDILLQSQASSIRNLEVQLRQLANHFSGRPQGSIPSNTETRNQAGGSGKEKCQAVTLRS----EMNLTIRDPKSNVETQLL-ILQLRSATQSKDIP
        YM KND ++QSQA+S+RNLEVQL QLAN    RPQG++PS+TE   +    GKE C+AVTLRS    E N+     K     Q    ++ + AT + +IP
Subjt:  YMQKNDILLQSQASSIRNLEVQLRQLANHFSGRPQGSIPSNTETRNQAGGSGKEKCQAVTLRS----EMNLTIRDPKSNVETQLL-ILQLRSATQSKDIP

Query:  NKDMESTRRY
         + + S RR+
Subjt:  NKDMESTRRY

XP_038902511.1 uncharacterized protein LOC120089170 [Benincasa hispida]4.0e-3137.94Show/hide
Query:  YNQIKTTLDIMASNNEEWDEDDFDNCRGERGRSDEG-MDKNVVVVLQGQMTAMNNLLKSMAI----LQVNVVRSSMLAVNQIDDLGCVGCDGPHNTDACP
        Y + K  LD +  N ++W ++ +     ER +++   +  +++  L  QM  + +LL+ MAI    L     + + LA  Q+  + C  C   H+ + CP
Subjt:  YNQIKTTLDIMASNNEEWDEDDFDNCRGERGRSDEG-MDKNVVVVLQGQMTAMNNLLKSMAI----LQVNVVRSSMLAVNQIDDLGCVGCDGPHNTDACP

Query:  LNTKTVAFIRNDPYSNTYNPGWRNHPNFGWGRTGQQNQGRQGGQSGQGDHRREASGYH----LRHHNNRPLHPQHQQQHTTTTPSTSSSMENLLREYMQK
         N + V  I+N+PY+NTYNPGWRNHPNF WG  G  +QG Q       ++R     +H      HH +R  H Q    + +T    SSS+E LL++Y++K
Subjt:  LNTKTVAFIRNDPYSNTYNPGWRNHPNFGWGRTGQQNQGRQGGQSGQGDHRREASGYH----LRHHNNRPLHPQHQQQHTTTTPSTSSSMENLLREYMQK

Query:  NDILLQSQASSIRNLEVQLRQLANHFSGRPQGSIPSNTETRNQAGGSGKEKCQ
        ND ++QSQASSIRNLEVQ+ QLA     R  G +PSN+E     G +GKE+CQ
Subjt:  NDILLQSQASSIRNLEVQLRQLANHFSGRPQGSIPSNTETRNQAGGSGKEKCQ

TrEMBL top hitse value%identityAlignment
A0A5D3CC26 Uncharacterized protein7.3e-3134.75Show/hide
Query:  MLKSTYNQIKTTLDIMASNNEEWDEDDFDN------CRGERGRSDEGMDKNVVVVLQGQMTAMNNLLKSMAILQVNVVRSSMLAVNQIDDLGCVGCDGPH
        ML+S+YNQIK  LD MASN++EW ++ F +       +G RGR ++G+D +++V LQGQ+  M N+L+SMA+LQVNVVRSS+  V Q++++GCVGC  PH
Subjt:  MLKSTYNQIKTTLDIMASNNEEWDEDDFDN------CRGERGRSDEGMDKNVVVVLQGQMTAMNNLLKSMAILQVNVVRSSMLAVNQIDDLGCVGCDGPH

Query:  NTDACPLNTKTVAFIRNDPYSNTYNPGWRNHPNFGWGRTGQQNQGRQGGQSGQGDHRREASGYHLRHHNNRPLHPQHQQQHTTTTPSTSSSMENLLREYM
        NT+ACPLNT+ VA+++NDP                                                    P+H     + T                  
Subjt:  NTDACPLNTKTVAFIRNDPYSNTYNPGWRNHPNFGWGRTGQQNQGRQGGQSGQGDHRREASGYHLRHHNNRPLHPQHQQQHTTTTPSTSSSMENLLREYM

Query:  QKNDILLQSQASSIRNLEVQLRQLANHFSGRPQGSIPSNTETRNQAGGSGKEKCQAVTLRSEMNLTIRDPKSNVETQLLILQLRSATQSKDIPNKDMEST
              + SQASSI+N+E+QL QL + FS RP+ S PSNTET NQ                      RDP +N                   PNK+MEST
Subjt:  QKNDILLQSQASSIRNLEVQLRQLANHFSGRPQGSIPSNTETRNQAGGSGKEKCQAVTLRSEMNLTIRDPKSNVETQLLILQLRSATQSKDIPNKDMEST

Query:  RRYEQ
         + EQ
Subjt:  RRYEQ

A0A5D3CSC7 Uncharacterized protein9.5e-3962.6Show/hide
Query:  STYNQIKTTLDIMASNNEEWDEDDFDNCRGERGRSDEGMDKNVVVVLQGQMTAMNNLLKSMAILQVNVVRSSMLAVNQIDDLGCVGCDGPHNTDACPLNT
        S+YNQI  TLD +A NNEEWD+D FD+ RG RG+++EG+D+NV+VV QGQMTAMNNLL+ M  LQVN   SS  +V Q+D++GC+    PH  DACPLN 
Subjt:  STYNQIKTTLDIMASNNEEWDEDDFDNCRGERGRSDEGMDKNVVVVLQGQMTAMNNLLKSMAILQVNVVRSSMLAVNQIDDLGCVGCDGPHNTDACPLNT

Query:  KTVAFIRNDPYSNTYNPGWRNHPNFGWGRTG
        + VA++++DPYSNTYNP WRNHPNF  GRTG
Subjt:  KTVAFIRNDPYSNTYNPGWRNHPNFGWGRTG

A0A5D3D2S0 Uncharacterized protein3.0e-4544.4Show/hide
Query:  MLKSTYNQIKTTLDIMASNNEEWDEDDFDNCRGERGRSDEGMDKNVVVVLQGQMTAMNNLLKSMAILQVNVVRSSMLAVNQIDDLGCVGCDGPHNTDACP
        ML+S+Y QIKTTLD + +N++E  +DD       RGR+D GMD+NV+V LQGQ+T M  LL+SMA+ QV+ V + + AV Q+D++  VGC  PH TDAC 
Subjt:  MLKSTYNQIKTTLDIMASNNEEWDEDDFDNCRGERGRSDEGMDKNVVVVLQGQMTAMNNLLKSMAILQVNVVRSSMLAVNQIDDLGCVGCDGPHNTDACP

Query:  LNTKTVAFIRNDPYSNTYNPGWRNHPNFGWGRTGQQNQGRQGGQSGQGDHRREASGYHLRHHNNRPLH--PQHQQQHTTTTPSTSSSMENLLREYMQKND
        LN +  A++++ PYSNTYN                            G++R EA  +  RH+ +RP +  PQHQQ  TT TPS+ SSM  LLR+YMQ+ D
Subjt:  LNTKTVAFIRNDPYSNTYNPGWRNHPNFGWGRTGQQNQGRQGGQSGQGDHRREASGYHLRHHNNRPLH--PQHQQQHTTTTPSTSSSMENLLREYMQKND

Query:  ILLQSQASSIRNLEVQLRQLANHFSGRPQGSIPSNTETRNQAGGSGKEKCQAVTLRSEMNLTIRDPKSNVETQLLIL
          +QSQ +SI NLE+ L QLA  FSGRP GS+PSN E  N   G  K K   +  R E +    D  SN  T  +++
Subjt:  ILLQSQASSIRNLEVQLRQLANHFSGRPQGSIPSNTETRNQAGGSGKEKCQAVTLRSEMNLTIRDPKSNVETQLLIL

A0A6J0ZX64 LOW QUALITY PROTEIN: uncharacterized protein LOC1104129451.1e-2637.2Show/hide
Query:  LDIMASNNEEWDEDDFDNCRGERGRSDEGMDKNVVVVLQGQMTAMNNLLKSMAILQVNVVRSSMLAVNQIDDLGCVGCDGPHNTDACPLNTKTVAFI---
        L+ MASNN +W          ER  S + +    +  L    T +  L K +  L V+ V++S++         C  C   H+ D CP N+++V F+   
Subjt:  LDIMASNNEEWDEDDFDNCRGERGRSDEGMDKNVVVVLQGQMTAMNNLLKSMAILQVNVVRSSMLAVNQIDDLGCVGCDGPHNTDACPLNTKTVAFI---

Query:  ---RNDPYSNTYNPGWRNHPNFGWGRTGQQNQGRQGGQSGQGDHRREASGYHLRHHNNRPLHPQ-HQQQHTTTTPSTSSSMENLLREYMQKNDILLQSQA
           +N+PYSNTYNPGWRNHPNF W            G S                 N +P+ P   QQQ     P   S +E LL +Y+ K D ++QSQ 
Subjt:  ---RNDPYSNTYNPGWRNHPNFGWGRTGQQNQGRQGGQSGQGDHRREASGYHLRHHNNRPLHPQ-HQQQHTTTTPSTSSSMENLLREYMQKNDILLQSQA

Query:  SSIRNLEVQLRQLANHFSGRPQGSIPSNTETRNQAGGSGKEKCQAVTLRS
        +S+RNLE Q+ QLAN  + RPQGS+PS+T    Q    GKE+CQA+TLRS
Subjt:  SSIRNLEVQLRQLANHFSGRPQGSIPSNTETRNQAGGSGKEKCQAVTLRS

A0A6J1DYG0 uncharacterized protein LOC1110257646.4e-2735.42Show/hide
Query:  KSTYNQIKTTLDIMASNNEEWDEDDFDNCRGERGRSDEG--MDKNVVVVLQGQMTAMNNLLKSMAILQVNVVRSSMLAVN----------QIDDLGCVGC
        K T+N+I   L+ +AS+NE W        R    + D    +  ++   +Q +   MN  LK M +   N + + +  V           Q++DL C  C
Subjt:  KSTYNQIKTTLDIMASNNEEWDEDDFDNCRGERGRSDEG--MDKNVVVVLQGQMTAMNNLLKSMAILQVNVVRSSMLAVN----------QIDDLGCVGC

Query:  DGPHNTDACPLNTKTVAFI-----RN-DPYSNTYNPGWRNHPNFGWGRTGQQNQGRQGGQSGQGDHRREASGYHLRHHNNRPLHPQHQQQHTTTTPSTSS
           H  D CP N  +V ++     RN +PYSNTYNPGWR+HPNF W   G    G  G   GQ    ++      + +   P    +Q+  T    + +S
Subjt:  DGPHNTDACPLNTKTVAFI-----RN-DPYSNTYNPGWRNHPNFGWGRTGQQNQGRQGGQSGQGDHRREASGYHLRHHNNRPLHPQHQQQHTTTTPSTSS

Query:  SMENLLREYMQKNDILLQSQASSIRNLEVQLRQLANHFSGRPQGSIPSNTETRNQAGGSGKEKCQAVTLRS
        ++EN+++EYM + D ++QSQA+S+RN E QL QLAN    RPQGS P +TE   +    GKE+C+AVTLRS
Subjt:  SMENLLREYMQKNDILLQSQASSIRNLEVQLRQLANHFSGRPQGSIPSNTETRNQAGGSGKEKCQAVTLRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAAAAGCACATACAACCAGATTAAAACGACACTGGATATAATGGCCAGCAACAATGAAGAATGGGATGAAGACGATTTCGACAATTGCCGAGGAGAACGAGGAAG
AAGTGATGAGGGAATGGATAAGAATGTCGTGGTGGTGTTGCAAGGACAGATGACTGCGATGAACAACCTGTTAAAATCAATGGCAATATTGCAGGTTAATGTCGTCAGAA
GCTCTATGCTGGCGGTGAATCAAATTGATGATTTGGGATGCGTAGGATGCGATGGTCCTCACAATACTGACGCATGCCCACTTAACACTAAAACTGTTGCGTTCATAAGG
AATGACCCCTACTCCAACACCTACAATCCTGGTTGGAGGAATCACCCTAACTTTGGATGGGGAAGGACGGGTCAACAAAACCAAGGGCGACAAGGTGGTCAAAGTGGTCA
AGGTGATCATCGCAGGGAAGCATCTGGCTACCACCTGAGACACCATAACAATAGACCACTGCATCCCCAGCATCAACAGCAACACACCACCACTACTCCATCCACGTCTT
CATCAATGGAAAACCTCCTCCGCGAGTATATGCAGAAGAATGATATCCTTCTGCAAAGCCAAGCTTCATCAATTCGTAATCTGGAGGTACAGTTAAGGCAGCTGGCCAAC
CATTTCTCCGGAAGGCCACAAGGATCAATCCCTAGCAATACGGAAACACGTAATCAGGCTGGAGGATCTGGAAAAGAGAAGTGTCAAGCTGTGACACTGCGAAGCGAAAT
GAATTTGACCATCCGCGACCCTAAATCGAACGTAGAAACTCAACTTCTAATTCTACAGCTGAGATCGGCAACACAAAGTAAAGACATACCAAACAAGGATATGGAGAGCA
CGAGGCGATATGAACAACAATCCTTGGGATGGGATTATTGCGAGGAAGAAGTCAATTTTGAACTGCTTAGCCCTGAAGAATTCTTTGAAGAACCTAAATATATAATAGAG
GAAGTAAACGTCGTGTCTGGCGAAAGGAAGTCAGAGTCTTTGGATCTGCAAACCAAAGGAGAGAAGAGAAATAAGCCATCAATCGAGGAACCACCAGAATTAGAGCTCAA
GCCTTTACCAAACCACCTGAAATATGCATACCTGGCGAAAGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGAAAAGCACATACAACCAGATTAAAACGACACTGGATATAATGGCCAGCAACAATGAAGAATGGGATGAAGACGATTTCGACAATTGCCGAGGAGAACGAGGAAG
AAGTGATGAGGGAATGGATAAGAATGTCGTGGTGGTGTTGCAAGGACAGATGACTGCGATGAACAACCTGTTAAAATCAATGGCAATATTGCAGGTTAATGTCGTCAGAA
GCTCTATGCTGGCGGTGAATCAAATTGATGATTTGGGATGCGTAGGATGCGATGGTCCTCACAATACTGACGCATGCCCACTTAACACTAAAACTGTTGCGTTCATAAGG
AATGACCCCTACTCCAACACCTACAATCCTGGTTGGAGGAATCACCCTAACTTTGGATGGGGAAGGACGGGTCAACAAAACCAAGGGCGACAAGGTGGTCAAAGTGGTCA
AGGTGATCATCGCAGGGAAGCATCTGGCTACCACCTGAGACACCATAACAATAGACCACTGCATCCCCAGCATCAACAGCAACACACCACCACTACTCCATCCACGTCTT
CATCAATGGAAAACCTCCTCCGCGAGTATATGCAGAAGAATGATATCCTTCTGCAAAGCCAAGCTTCATCAATTCGTAATCTGGAGGTACAGTTAAGGCAGCTGGCCAAC
CATTTCTCCGGAAGGCCACAAGGATCAATCCCTAGCAATACGGAAACACGTAATCAGGCTGGAGGATCTGGAAAAGAGAAGTGTCAAGCTGTGACACTGCGAAGCGAAAT
GAATTTGACCATCCGCGACCCTAAATCGAACGTAGAAACTCAACTTCTAATTCTACAGCTGAGATCGGCAACACAAAGTAAAGACATACCAAACAAGGATATGGAGAGCA
CGAGGCGATATGAACAACAATCCTTGGGATGGGATTATTGCGAGGAAGAAGTCAATTTTGAACTGCTTAGCCCTGAAGAATTCTTTGAAGAACCTAAATATATAATAGAG
GAAGTAAACGTCGTGTCTGGCGAAAGGAAGTCAGAGTCTTTGGATCTGCAAACCAAAGGAGAGAAGAGAAATAAGCCATCAATCGAGGAACCACCAGAATTAGAGCTCAA
GCCTTTACCAAACCACCTGAAATATGCATACCTGGCGAAAGGATAG
Protein sequenceShow/hide protein sequence
MLKSTYNQIKTTLDIMASNNEEWDEDDFDNCRGERGRSDEGMDKNVVVVLQGQMTAMNNLLKSMAILQVNVVRSSMLAVNQIDDLGCVGCDGPHNTDACPLNTKTVAFIR
NDPYSNTYNPGWRNHPNFGWGRTGQQNQGRQGGQSGQGDHRREASGYHLRHHNNRPLHPQHQQQHTTTTPSTSSSMENLLREYMQKNDILLQSQASSIRNLEVQLRQLAN
HFSGRPQGSIPSNTETRNQAGGSGKEKCQAVTLRSEMNLTIRDPKSNVETQLLILQLRSATQSKDIPNKDMESTRRYEQQSLGWDYCEEEVNFELLSPEEFFEEPKYIIE
EVNVVSGERKSESLDLQTKGEKRNKPSIEEPPELELKPLPNHLKYAYLAKG