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PI0028570 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028570
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr03:14944335..14945524
RNA-Seq ExpressionPI0028570
SyntenyPI0028570
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025356.1 hypothetical protein E6C27_scaffold1204G00400 [Cucumis melo var. makuwa]3.9e-4943.32Show/hide
Query:  MAPTLEREVKEYREESDSSKSDRHWKRLWKKAKASGDDSCGRGSSAMGIPKVPTPLSPLDDQFQGLVEICSDDSLTGPHVVDSVLEGVSTSKTPVAKVAK
        MAP LE EVKE+++ESDSSKSDRHWKR  KKA+ SGD    RG SA+ +P VP  +SPL+D  +GL+E  SD+SLTGPH VD   E V TSKTPV K A+
Subjt:  MAPTLEREVKEYREESDSSKSDRHWKRLWKKAKASGDDSCGRGSSAMGIPKVPTPLSPLDDQFQGLVEICSDDSLTGPHVVDSVLEGVSTSKTPVAKVAK

Query:  QSLRPPTLLEEIRRDKI-----------------LKI---QILCPKAP---------KKQIARHPKPSQWIGEK--------------------------
        QSLRP  LLEEIRR K+                 LK    ++   +AP          KQ AR+P+PSQW+GEK                          
Subjt:  QSLRPPTLLEEIRRDKI-----------------LKI---QILCPKAP---------KKQIARHPKPSQWIGEK--------------------------

Query:  -------------------------------------------------------------------------LSILSCEKNEAIDRKELEVAKLQDEAN
                                                                                 LSILSCEK EAID++ELEVAKLQDE N
Subjt:  -------------------------------------------------------------------------LSILSCEKNEAIDRKELEVAKLQDEAN

Query:  TFESTPAITEEATEALATVRKSMEAAREEFKNFKWKL
        T ESTPAITEEA EALA+VR+SMEAAREEFKNFKW+L
Subjt:  TFESTPAITEEATEALATVRKSMEAAREEFKNFKWKL

KAA0037262.1 hypothetical protein E6C27_scaffold379G001910 [Cucumis melo var. makuwa]4.7e-5053.16Show/hide
Query:  MAPTLEREVKEYREESDSSKSDRHWKRLWKKAKASGDDSCGRGSSAMGIPKVPTPLSPLDDQFQGLVEICSDDSLTGPHVVDSVLEGVSTSKTPVAKVAK
        M  TLE E+K++++ESDSSKSD HWKR  KKAK S DD  GRGSSA+ +P VP PL PL+   +GLVE+ +D+SLTGPH VDS +EGV TSKTP++K AK
Subjt:  MAPTLEREVKEYREESDSSKSDRHWKRLWKKAKASGDDSCGRGSSAMGIPKVPTPLSPLDDQFQGLVEICSDDSLTGPHVVDSVLEGVSTSKTPVAKVAK

Query:  QSLRPPTLLEEIRRDKILKIQI----------LCPKAPKKQIARHPKPSQWIGEK---------------------------LSIL-----SCEKNEAID
        QSLRP  LLEEIRR K+    I            PK P ++I R P+PSQW+GEK                           L+++       +K +AID
Subjt:  QSLRPPTLLEEIRRDKILKIQI----------LCPKAPKKQIARHPKPSQWIGEK---------------------------LSIL-----SCEKNEAID

Query:  RKELEVAKLQDEANTFESTPAITEEATEALATVRKSM
        ++ELEVAKLQDE NT ESTPAITEEA EALATVR+SM
Subjt:  RKELEVAKLQDEANTFESTPAITEEATEALATVRKSM

KAA0042070.1 hypothetical protein E6C27_scaffold67G005320 [Cucumis melo var. makuwa]1.1e-4843.35Show/hide
Query:  MAPTLEREVKEYREESDSSKSDRHWKRLWKKAKASGDDSCGRGSSAMGIPKVPTPLSPLDDQFQGLVEICSDDSLTGPHVVDSVLEGVSTSKTPVAKVAK
        MA TLE E+ E+++E+DSSKSDRHWKR  KKAK S DD   RGSSA+G        SPL+   +GLVE+ +D+SLTGPHVVDS +EGV TSKTPV+K  +
Subjt:  MAPTLEREVKEYREESDSSKSDRHWKRLWKKAKASGDDSCGRGSSAMGIPKVPTPLSPLDDQFQGLVEICSDDSLTGPHVVDSVLEGVSTSKTPVAKVAK

Query:  QSLRPPTLLEEIRRDKIL----------KIQILCPK---------------------APKKQIARHPKPSQWIGEKL-----------------------
        QSLRP TLLEEIRR K++               CP+                     A  +QI R P+PSQW+GEK+                       
Subjt:  QSLRPPTLLEEIRRDKIL----------KIQILCPK---------------------APKKQIARHPKPSQWIGEKL-----------------------

Query:  -----------------------------------------------------SILSCEKNEAIDRKELEVAKLQDEANTFESTPAITEEATEALATVRK
                                                              +LS +K +AID++ELEVAKLQDE NT E TPAITEEA EALATVR+
Subjt:  -----------------------------------------------------SILSCEKNEAIDRKELEVAKLQDEANTFESTPAITEEATEALATVRK

Query:  SMEAAREEFKNFKWKL
        SMEAAR+EFKNFKWKL
Subjt:  SMEAAREEFKNFKWKL

KAA0048242.1 hypothetical protein E6C27_scaffold63G001580 [Cucumis melo var. makuwa]8.8e-4947.14Show/hide
Query:  MAPTLEREVKEYREESDSSKSDRHWKRLWKKAKASGDDSCGRGSSAMGIPKVPTPLSPLDDQFQGLVEICSDDSLTGPHVVDSVLEGVSTSKTPVAKVAK
        MA TLE E+KE+++ESDSSKSD HWKR  KKAK SGDD  G+ SSA+G+P VP+ LSPL+D  +GL+E+ S++SL GPH VDS +E V TSKTPV+K  +
Subjt:  MAPTLEREVKEYREESDSSKSDRHWKRLWKKAKASGDDSCGRGSSAMGIPKVPTPLSPLDDQFQGLVEICSDDSLTGPHVVDSVLEGVSTSKTPVAKVAK

Query:  QSLRPPTLLEEIRRDKILKIQ----------ILCPKAP-------------------------------------------------------------K
        QSLRP  LLEEI R K+   +            CPK P                                                             K
Subjt:  QSLRPPTLLEEIRRDKILKIQ----------ILCPKAP-------------------------------------------------------------K

Query:  KQIARHPKPSQWIGEKLSILSCEKNEAIDRKELEVAKLQDEANTFESTPAITEEATEALATVRKSMEAAREEFKNFKWKL
        K++ R         E+LSILSCEK +AID+KELEV KLQ E NT E TP ITEEA +ALATVR+SME A+EEFKNFKWKL
Subjt:  KQIARHPKPSQWIGEKLSILSCEKNEAIDRKELEVAKLQDEANTFESTPAITEEATEALATVRKSMEAAREEFKNFKWKL

KAA0057699.1 hypothetical protein E6C27_scaffold126G00510 [Cucumis melo var. makuwa]5.5e-5152.23Show/hide
Query:  MAPTLEREVKEYREESDSSKSDRHWKRLWKKAKASGDDSCGRGSSAMGIPKVPTPLSPLDDQFQGLVEICSDDSLTGPHVVDSVLEGVSTSKTPVAKVAK
        MAP LE EV E+++ESDSSKSDRHWKR  KKAK SGD+  GRG SA+ +P VP PLSPL+D  +GL+ + SD+SL GPH VDS  E V TSKTPV K  +
Subjt:  MAPTLEREVKEYREESDSSKSDRHWKRLWKKAKASGDDSCGRGSSAMGIPKVPTPLSPLDDQFQGLVEICSDDSLTGPHVVDSVLEGVSTSKTPVAKVAK

Query:  QSLRPPTLLEEIRRDKIL----------KIQILCPKAPKKQIARHPKP----------SQWIGEKLSIL------------------SCEKNEAIDRKEL
        QSLRP  LLEEIRR K++            +  CPK+  ++++    P          ++ + EK S +                     + +AID++EL
Subjt:  QSLRPPTLLEEIRRDKIL----------KIQILCPKAPKKQIARHPKP----------SQWIGEKLSIL------------------SCEKNEAIDRKEL

Query:  EVAKLQDEANTFESTPAITEEATEALATVRKSMEAAREEFKNFKWKL
        E+AKLQDE NT E+TPAITEEA EALATVRKSMEA REEFKNFKWKL
Subjt:  EVAKLQDEANTFESTPAITEEATEALATVRKSMEAAREEFKNFKWKL

TrEMBL top hitse value%identityAlignment
A0A5A7SHN8 PMD domain-containing protein1.9e-4943.32Show/hide
Query:  MAPTLEREVKEYREESDSSKSDRHWKRLWKKAKASGDDSCGRGSSAMGIPKVPTPLSPLDDQFQGLVEICSDDSLTGPHVVDSVLEGVSTSKTPVAKVAK
        MAP LE EVKE+++ESDSSKSDRHWKR  KKA+ SGD    RG SA+ +P VP  +SPL+D  +GL+E  SD+SLTGPH VD   E V TSKTPV K A+
Subjt:  MAPTLEREVKEYREESDSSKSDRHWKRLWKKAKASGDDSCGRGSSAMGIPKVPTPLSPLDDQFQGLVEICSDDSLTGPHVVDSVLEGVSTSKTPVAKVAK

Query:  QSLRPPTLLEEIRRDKI-----------------LKI---QILCPKAP---------KKQIARHPKPSQWIGEK--------------------------
        QSLRP  LLEEIRR K+                 LK    ++   +AP          KQ AR+P+PSQW+GEK                          
Subjt:  QSLRPPTLLEEIRRDKI-----------------LKI---QILCPKAP---------KKQIARHPKPSQWIGEK--------------------------

Query:  -------------------------------------------------------------------------LSILSCEKNEAIDRKELEVAKLQDEAN
                                                                                 LSILSCEK EAID++ELEVAKLQDE N
Subjt:  -------------------------------------------------------------------------LSILSCEKNEAIDRKELEVAKLQDEAN

Query:  TFESTPAITEEATEALATVRKSMEAAREEFKNFKWKL
        T ESTPAITEEA EALA+VR+SMEAAREEFKNFKW+L
Subjt:  TFESTPAITEEATEALATVRKSMEAAREEFKNFKWKL

A0A5A7UVX0 PMD domain-containing protein2.7e-5152.23Show/hide
Query:  MAPTLEREVKEYREESDSSKSDRHWKRLWKKAKASGDDSCGRGSSAMGIPKVPTPLSPLDDQFQGLVEICSDDSLTGPHVVDSVLEGVSTSKTPVAKVAK
        MAP LE EV E+++ESDSSKSDRHWKR  KKAK SGD+  GRG SA+ +P VP PLSPL+D  +GL+ + SD+SL GPH VDS  E V TSKTPV K  +
Subjt:  MAPTLEREVKEYREESDSSKSDRHWKRLWKKAKASGDDSCGRGSSAMGIPKVPTPLSPLDDQFQGLVEICSDDSLTGPHVVDSVLEGVSTSKTPVAKVAK

Query:  QSLRPPTLLEEIRRDKIL----------KIQILCPKAPKKQIARHPKP----------SQWIGEKLSIL------------------SCEKNEAIDRKEL
        QSLRP  LLEEIRR K++            +  CPK+  ++++    P          ++ + EK S +                     + +AID++EL
Subjt:  QSLRPPTLLEEIRRDKIL----------KIQILCPKAPKKQIARHPKP----------SQWIGEKLSIL------------------SCEKNEAIDRKEL

Query:  EVAKLQDEANTFESTPAITEEATEALATVRKSMEAAREEFKNFKWKL
        E+AKLQDE NT E+TPAITEEA EALATVRKSMEA REEFKNFKWKL
Subjt:  EVAKLQDEANTFESTPAITEEATEALATVRKSMEAAREEFKNFKWKL

A0A5D3C6L1 Uncharacterized protein2.3e-5053.16Show/hide
Query:  MAPTLEREVKEYREESDSSKSDRHWKRLWKKAKASGDDSCGRGSSAMGIPKVPTPLSPLDDQFQGLVEICSDDSLTGPHVVDSVLEGVSTSKTPVAKVAK
        M  TLE E+K++++ESDSSKSD HWKR  KKAK S DD  GRGSSA+ +P VP PL PL+   +GLVE+ +D+SLTGPH VDS +EGV TSKTP++K AK
Subjt:  MAPTLEREVKEYREESDSSKSDRHWKRLWKKAKASGDDSCGRGSSAMGIPKVPTPLSPLDDQFQGLVEICSDDSLTGPHVVDSVLEGVSTSKTPVAKVAK

Query:  QSLRPPTLLEEIRRDKILKIQI----------LCPKAPKKQIARHPKPSQWIGEK---------------------------LSIL-----SCEKNEAID
        QSLRP  LLEEIRR K+    I            PK P ++I R P+PSQW+GEK                           L+++       +K +AID
Subjt:  QSLRPPTLLEEIRRDKILKIQI----------LCPKAPKKQIARHPKPSQWIGEK---------------------------LSIL-----SCEKNEAID

Query:  RKELEVAKLQDEANTFESTPAITEEATEALATVRKSM
        ++ELEVAKLQDE NT ESTPAITEEA EALATVR+SM
Subjt:  RKELEVAKLQDEANTFESTPAITEEATEALATVRKSM

A0A5D3C961 Uncharacterized protein4.2e-4947.14Show/hide
Query:  MAPTLEREVKEYREESDSSKSDRHWKRLWKKAKASGDDSCGRGSSAMGIPKVPTPLSPLDDQFQGLVEICSDDSLTGPHVVDSVLEGVSTSKTPVAKVAK
        MA TLE E+KE+++ESDSSKSD HWKR  KKAK SGDD  G+ SSA+G+P VP+ LSPL+D  +GL+E+ S++SL GPH VDS +E V TSKTPV+K  +
Subjt:  MAPTLEREVKEYREESDSSKSDRHWKRLWKKAKASGDDSCGRGSSAMGIPKVPTPLSPLDDQFQGLVEICSDDSLTGPHVVDSVLEGVSTSKTPVAKVAK

Query:  QSLRPPTLLEEIRRDKILKIQ----------ILCPKAP-------------------------------------------------------------K
        QSLRP  LLEEI R K+   +            CPK P                                                             K
Subjt:  QSLRPPTLLEEIRRDKILKIQ----------ILCPKAP-------------------------------------------------------------K

Query:  KQIARHPKPSQWIGEKLSILSCEKNEAIDRKELEVAKLQDEANTFESTPAITEEATEALATVRKSMEAAREEFKNFKWKL
        K++ R         E+LSILSCEK +AID+KELEV KLQ E NT E TP ITEEA +ALATVR+SME A+EEFKNFKWKL
Subjt:  KQIARHPKPSQWIGEKLSILSCEKNEAIDRKELEVAKLQDEANTFESTPAITEEATEALATVRKSMEAAREEFKNFKWKL

A0A5D3D2A0 PMD domain-containing protein5.5e-4943.35Show/hide
Query:  MAPTLEREVKEYREESDSSKSDRHWKRLWKKAKASGDDSCGRGSSAMGIPKVPTPLSPLDDQFQGLVEICSDDSLTGPHVVDSVLEGVSTSKTPVAKVAK
        MA TLE E+ E+++E+DSSKSDRHWKR  KKAK S DD   RGSSA+G        SPL+   +GLVE+ +D+SLTGPHVVDS +EGV TSKTPV+K  +
Subjt:  MAPTLEREVKEYREESDSSKSDRHWKRLWKKAKASGDDSCGRGSSAMGIPKVPTPLSPLDDQFQGLVEICSDDSLTGPHVVDSVLEGVSTSKTPVAKVAK

Query:  QSLRPPTLLEEIRRDKIL----------KIQILCPK---------------------APKKQIARHPKPSQWIGEKL-----------------------
        QSLRP TLLEEIRR K++               CP+                     A  +QI R P+PSQW+GEK+                       
Subjt:  QSLRPPTLLEEIRRDKIL----------KIQILCPK---------------------APKKQIARHPKPSQWIGEKL-----------------------

Query:  -----------------------------------------------------SILSCEKNEAIDRKELEVAKLQDEANTFESTPAITEEATEALATVRK
                                                              +LS +K +AID++ELEVAKLQDE NT E TPAITEEA EALATVR+
Subjt:  -----------------------------------------------------SILSCEKNEAIDRKELEVAKLQDEANTFESTPAITEEATEALATVRK

Query:  SMEAAREEFKNFKWKL
        SMEAAR+EFKNFKWKL
Subjt:  SMEAAREEFKNFKWKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCTACCCTCGAGAGGGAGGTCAAGGAATACAGAGAGGAGAGTGATAGCAGCAAAAGCGATCGTCACTGGAAGAGACTTTGGAAGAAAGCAAAGGCATCAGGTGA
TGATTCCTGTGGAAGAGGTTCAAGTGCTATGGGAATTCCTAAAGTTCCAACACCACTGTCACCTTTGGACGATCAATTTCAAGGACTTGTGGAGATATGTAGTGATGACT
CTCTGACAGGGCCTCATGTTGTGGATTCAGTCCTTGAAGGAGTTAGTACCTCAAAGACACCAGTTGCCAAAGTAGCTAAACAATCCTTACGTCCTCCTACTCTTCTCGAG
GAGATTCGTCGGGACAAGATATTGAAAATTCAAATCCTCTGTCCAAAGGCCCCAAAGAAGCAGATAGCAAGACATCCTAAGCCTTCTCAATGGATTGGTGAAAAGCTATC
CATCTTATCTTGTGAGAAAAATGAGGCCATAGATAGGAAAGAACTAGAAGTTGCCAAGCTCCAAGACGAAGCCAACACTTTTGAAAGCACCCCTGCTATCACCGAAGAAG
CCACCGAGGCCTTGGCTACGGTTCGTAAGAGTATGGAGGCTGCACGCGAAGAATTCAAGAACTTCAAGTGGAAGCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCTACCCTCGAGAGGGAGGTCAAGGAATACAGAGAGGAGAGTGATAGCAGCAAAAGCGATCGTCACTGGAAGAGACTTTGGAAGAAAGCAAAGGCATCAGGTGA
TGATTCCTGTGGAAGAGGTTCAAGTGCTATGGGAATTCCTAAAGTTCCAACACCACTGTCACCTTTGGACGATCAATTTCAAGGACTTGTGGAGATATGTAGTGATGACT
CTCTGACAGGGCCTCATGTTGTGGATTCAGTCCTTGAAGGAGTTAGTACCTCAAAGACACCAGTTGCCAAAGTAGCTAAACAATCCTTACGTCCTCCTACTCTTCTCGAG
GAGATTCGTCGGGACAAGATATTGAAAATTCAAATCCTCTGTCCAAAGGCCCCAAAGAAGCAGATAGCAAGACATCCTAAGCCTTCTCAATGGATTGGTGAAAAGCTATC
CATCTTATCTTGTGAGAAAAATGAGGCCATAGATAGGAAAGAACTAGAAGTTGCCAAGCTCCAAGACGAAGCCAACACTTTTGAAAGCACCCCTGCTATCACCGAAGAAG
CCACCGAGGCCTTGGCTACGGTTCGTAAGAGTATGGAGGCTGCACGCGAAGAATTCAAGAACTTCAAGTGGAAGCTTTGA
Protein sequenceShow/hide protein sequence
MAPTLEREVKEYREESDSSKSDRHWKRLWKKAKASGDDSCGRGSSAMGIPKVPTPLSPLDDQFQGLVEICSDDSLTGPHVVDSVLEGVSTSKTPVAKVAKQSLRPPTLLE
EIRRDKILKIQILCPKAPKKQIARHPKPSQWIGEKLSILSCEKNEAIDRKELEVAKLQDEANTFESTPAITEEATEALATVRKSMEAAREEFKNFKWKL