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PI0028572 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028572
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionIleal sodium/bile acid cotransporter, putative
Genome locationchr09:8636714..8637191
RNA-Seq ExpressionPI0028572
SyntenyPI0028572
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050246.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa]1.3e-5485.03Show/hide
Query:  MNELYSFITAINERNYEINSLPICITMQRPSP------------TILGLTFQAVLTLFITSPSSSPPLLTHLFGAAVLISFGVSFAGFFLQNGFPRIALL
        MNELYSFITAINERN EINSLPICITMQRPSP            TILGLTFQAVL LFITSP+SSPPLLTHLF AAVLISF VSFAG FLQNGFPRIALL
Subjt:  MNELYSFITAINERNYEINSLPICITMQRPSP------------TILGLTFQAVLTLFITSPSSSPPLLTHLFGAAVLISFGVSFAGFFLQNGFPRIALL

Query:  FGKIGALIAAIGVCIIASLLLIHQNFAWISWLACGFSLMAFVLSFRG
        F KIGALIAAIGVCI+AS LLIHQNFAWISWLA GFSLMAFVLSFRG
Subjt:  FGKIGALIAAIGVCIIASLLLIHQNFAWISWLACGFSLMAFVLSFRG

KAG6579136.1 hypothetical protein SDJN03_23584, partial [Cucurbita argyrosperma subsp. sororia]4.4e-3155.86Show/hide
Query:  MESSSQQISIDMNELYSFITAINERNYEINSLPICITMQRPSPTILGLTFQAVLTLFITSPSSSPPLLTHLFGAAVLISFGVSFAGFFLQNGFPRIALLF
        M S+ Q +SIDMN+  S   A +  + E  +             + GLTFQAVL LFI++P+S PPLL +LF AA+LIS  +S A  FLQ  FPRIAL F
Subjt:  MESSSQQISIDMNELYSFITAINERNYEINSLPICITMQRPSPTILGLTFQAVLTLFITSPSSSPPLLTHLFGAAVLISFGVSFAGFFLQNGFPRIALLF

Query:  GKIGALIAAIGVCIIASLLLIHQNFAWISWLACGFSLMAFVLSFR
        GKIGA++AA+G CI+ASLLL HQNF+WI WLACGF+LMAF+LSF+
Subjt:  GKIGALIAAIGVCIIASLLLIHQNFAWISWLACGFSLMAFVLSFR

KAG6579137.1 hypothetical protein SDJN03_23585, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2952.53Show/hide
Query:  MESSSQQISIDMNELYSFITAINERNYEINSLPICITMQRPSP-------------TILGLTFQAVLTLFITSPSSSPPLLTHLFGAAVLISFGVSFAGF
        M S+ Q +SIDMN+      A        + LP    M RP P              + GLTFQAVL LFI+ P+S PPLL H+F AA+LISF +S A  
Subjt:  MESSSQQISIDMNELYSFITAINERNYEINSLPICITMQRPSP-------------TILGLTFQAVLTLFITSPSSSPPLLTHLFGAAVLISFGVSFAGF

Query:  FLQNGFPRIALLFGKIGALIAAIGVCIIASLLLIHQNFAWISWLACGFSLMAFVLSFR
        FLQ  +PRIAL  GKIGAL+AAIG C I S+LL HQ+F+WI WLACGF+LMAF+LSF+
Subjt:  FLQNGFPRIALLFGKIGALIAAIGVCIIASLLLIHQNFAWISWLACGFSLMAFVLSFR

KGN49803.1 hypothetical protein Csa_004681 [Cucumis sativus]7.5e-5580.38Show/hide
Query:  MESSSQQISIDMNELYSFITAINERNYEINSLPICITMQRPSP------------TILGLTFQAVLTLFITSPSSSPPLLTHLFGAAVLISFGVSFAGFF
        MESSSQQISIDMN LYS IT+INERN EIN LPICI MQ  SP            TILGLTFQAVL LFITS +SSPPLLTHLFGAAVLISF VSF G F
Subjt:  MESSSQQISIDMNELYSFITAINERNYEINSLPICITMQRPSP------------TILGLTFQAVLTLFITSPSSSPPLLTHLFGAAVLISFGVSFAGFF

Query:  LQNGFPRIALLFGKIGALIAAIGVCIIASLLLIHQNFAWISWLACGFSLMAFVLSFRG
        LQ+GFPRIALLF KIGALIAAIGVCI+AS LLIHQNFAWISWLACGFSLMAF+LSFRG
Subjt:  LQNGFPRIALLFGKIGALIAAIGVCIIASLLLIHQNFAWISWLACGFSLMAFVLSFRG

KGN49808.1 hypothetical protein Csa_004650 [Cucumis sativus]1.4e-3254.88Show/hide
Query:  MESSSQQISIDMNELYSFITAINERNYEI-------NSLPICITMQR-PSPT----------ILGLTFQAVLTLFITS-PSSSPPLLTHLFGAAVLISFG
        M S+S Q S+DM+   SFI  I++RNY +       N LP+ I MQ+ P  T          IL L+FQAVL LFI+S P+S PPLL H F AAV ISF 
Subjt:  MESSSQQISIDMNELYSFITAINERNYEI-------NSLPICITMQR-PSPT----------ILGLTFQAVLTLFITS-PSSSPPLLTHLFGAAVLISFG

Query:  VSFAGFFLQNGFPRIALLFGKIGALIAAIGVCIIASLLLIHQNFAWISWLACGFSLMAFVLSFR
        VSFA  FL N FPR A LF K+GAL +A GVC IAS LL+HQNFAWI W+AC FS++ F LSF+
Subjt:  VSFAGFFLQNGFPRIALLFGKIGALIAAIGVCIIASLLLIHQNFAWISWLACGFSLMAFVLSFR

TrEMBL top hitse value%identityAlignment
A0A0A0KJN8 Uncharacterized protein3.6e-5580.38Show/hide
Query:  MESSSQQISIDMNELYSFITAINERNYEINSLPICITMQRPSP------------TILGLTFQAVLTLFITSPSSSPPLLTHLFGAAVLISFGVSFAGFF
        MESSSQQISIDMN LYS IT+INERN EIN LPICI MQ  SP            TILGLTFQAVL LFITS +SSPPLLTHLFGAAVLISF VSF G F
Subjt:  MESSSQQISIDMNELYSFITAINERNYEINSLPICITMQRPSP------------TILGLTFQAVLTLFITSPSSSPPLLTHLFGAAVLISFGVSFAGFF

Query:  LQNGFPRIALLFGKIGALIAAIGVCIIASLLLIHQNFAWISWLACGFSLMAFVLSFRG
        LQ+GFPRIALLF KIGALIAAIGVCI+AS LLIHQNFAWISWLACGFSLMAF+LSFRG
Subjt:  LQNGFPRIALLFGKIGALIAAIGVCIIASLLLIHQNFAWISWLACGFSLMAFVLSFRG

A0A0A0KJP2 Uncharacterized protein6.6e-3354.88Show/hide
Query:  MESSSQQISIDMNELYSFITAINERNYEI-------NSLPICITMQR-PSPT----------ILGLTFQAVLTLFITS-PSSSPPLLTHLFGAAVLISFG
        M S+S Q S+DM+   SFI  I++RNY +       N LP+ I MQ+ P  T          IL L+FQAVL LFI+S P+S PPLL H F AAV ISF 
Subjt:  MESSSQQISIDMNELYSFITAINERNYEI-------NSLPICITMQR-PSPT----------ILGLTFQAVLTLFITS-PSSSPPLLTHLFGAAVLISFG

Query:  VSFAGFFLQNGFPRIALLFGKIGALIAAIGVCIIASLLLIHQNFAWISWLACGFSLMAFVLSFR
        VSFA  FL N FPR A LF K+GAL +A GVC IAS LL+HQNFAWI W+AC FS++ F LSF+
Subjt:  VSFAGFFLQNGFPRIALLFGKIGALIAAIGVCIIASLLLIHQNFAWISWLACGFSLMAFVLSFR

A0A5A7U7U1 Putative Ileal sodium/bile acid cotransporter6.2e-5585.03Show/hide
Query:  MNELYSFITAINERNYEINSLPICITMQRPSP------------TILGLTFQAVLTLFITSPSSSPPLLTHLFGAAVLISFGVSFAGFFLQNGFPRIALL
        MNELYSFITAINERN EINSLPICITMQRPSP            TILGLTFQAVL LFITSP+SSPPLLTHLF AAVLISF VSFAG FLQNGFPRIALL
Subjt:  MNELYSFITAINERNYEINSLPICITMQRPSP------------TILGLTFQAVLTLFITSPSSSPPLLTHLFGAAVLISFGVSFAGFFLQNGFPRIALL

Query:  FGKIGALIAAIGVCIIASLLLIHQNFAWISWLACGFSLMAFVLSFRG
        F KIGALIAAIGVCI+AS LLIHQNFAWISWLA GFSLMAFVLSFRG
Subjt:  FGKIGALIAAIGVCIIASLLLIHQNFAWISWLACGFSLMAFVLSFRG

A0A5D3BEH8 Putative Ileal sodium/bile acid cotransporter6.0e-2650Show/hide
Query:  ESSSQQISIDMNELYSFITAINERNYEINS----------LPICITMQRPSP--------TILGLTFQAVLTLFITSPSSSPPLLTHLFGAAVLISFGVS
        E+   +IS+DMNELYSFITA+  RN  I+S          LPI I MQRPSP        T +   FQA+L LF+  P S PP L+ L G  +L +F  S
Subjt:  ESSSQQISIDMNELYSFITAINERNYEINS----------LPICITMQRPSP--------TILGLTFQAVLTLFITSPSSSPPLLTHLFGAAVLISFGVS

Query:  FAGFFLQNGFPRIALLFGKIGALIAAIGVCIIASLLLIHQNFAWISWLACGFSLMAFVLSFR
        F G  LQ  FP+IA L    GAL+AAIGVCI+ S LL H N  WI WLACG  L AF+ SF+
Subjt:  FAGFFLQNGFPRIALLFGKIGALIAAIGVCIIASLLLIHQNFAWISWLACGFSLMAFVLSFR

A0A6J1CY58 uncharacterized protein LOC1110156584.3e-2461.29Show/hide
Query:  MESSSQQISIDMNELYSFITAINERNYEINS-------------LPICITMQRPSP---------TILGLTFQAVLTLFITSPSSSPPLLTHLFGAAVLI
        M S+ QQ S+DMN L SFITAINERN  I+S             LPICI MQRP P         TILGLTFQAVL LFI+ PSS P L T LFGAAVLI
Subjt:  MESSSQQISIDMNELYSFITAINERNYEINS-------------LPICITMQRPSP---------TILGLTFQAVLTLFITSPSSSPPLLTHLFGAAVLI

Query:  SFGVSFAGFFLQNGFPRIALLFGK
        SF VSFAG FLQ  +PR+ALLF K
Subjt:  SFGVSFAGFFLQNGFPRIALLFGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCAAGTTCACAGCAAATTTCCATAGATATGAATGAACTCTATTCCTTCATCACAGCAATTAATGAAAGAAATTATGAAATCAACAGCTTACCAATTTGCATCAC
AATGCAGAGACCATCACCAACAATTCTTGGTCTTACTTTTCAGGCAGTTTTGACTTTGTTCATTACCTCACCCAGTTCATCTCCTCCACTTTTGACACATCTCTTTGGGG
CTGCAGTCTTGATTAGCTTTGGAGTTTCATTTGCTGGATTTTTCCTTCAAAATGGATTCCCGAGAATTGCGCTTCTGTTCGGAAAGATTGGTGCTCTTATTGCTGCAATC
GGTGTGTGCATCATAGCAAGTCTTCTTCTAATCCATCAGAACTTTGCTTGGATCTCTTGGCTGGCTTGTGGCTTCTCCTTGATGGCTTTTGTTCTATCATTTAGAGGGTA
G
mRNA sequenceShow/hide mRNA sequence
ATGGAATCAAGTTCACAGCAAATTTCCATAGATATGAATGAACTCTATTCCTTCATCACAGCAATTAATGAAAGAAATTATGAAATCAACAGCTTACCAATTTGCATCAC
AATGCAGAGACCATCACCAACAATTCTTGGTCTTACTTTTCAGGCAGTTTTGACTTTGTTCATTACCTCACCCAGTTCATCTCCTCCACTTTTGACACATCTCTTTGGGG
CTGCAGTCTTGATTAGCTTTGGAGTTTCATTTGCTGGATTTTTCCTTCAAAATGGATTCCCGAGAATTGCGCTTCTGTTCGGAAAGATTGGTGCTCTTATTGCTGCAATC
GGTGTGTGCATCATAGCAAGTCTTCTTCTAATCCATCAGAACTTTGCTTGGATCTCTTGGCTGGCTTGTGGCTTCTCCTTGATGGCTTTTGTTCTATCATTTAGAGGGTA
G
Protein sequenceShow/hide protein sequence
MESSSQQISIDMNELYSFITAINERNYEINSLPICITMQRPSPTILGLTFQAVLTLFITSPSSSPPLLTHLFGAAVLISFGVSFAGFFLQNGFPRIALLFGKIGALIAAI
GVCIIASLLLIHQNFAWISWLACGFSLMAFVLSFRG