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PI0028591 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028591
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr03:14777497..14778167
RNA-Seq ExpressionPI0028591
SyntenyPI0028591
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33917.1 hypothetical protein [Cucumis melo subsp. melo]3.3e-3357.81Show/hide
Query:  MAEKMSGCHIQGSPTIDYRIKNMKKTFQTIAKMRRPSCNGFCWNDEVKCTIAENELFDNWVKGLDMSLDDIIDTRPGRSSEGRSGSSRSKRKRRGPTIEI
        MA+KMSG +IQ + TID  IK M+KTF  I+++R PSC+GF WNDE+   I E ++FDNW+KGL+MS D+ +D+R GRS +GR+ SSRSKRKR G  IEI
Subjt:  MAEKMSGCHIQGSPTIDYRIKNMKKTFQTIAKMRRPSCNGFCWNDEVKCTIAENELFDNWVKGLDMSLDDIIDTRPGRSSEGRSGSSRSKRKRRGPTIEI

Query:  VEIIRNAVHFANDQLKAIAEWPNLQRQD
          II+NA+ +ANDQL  I +WP L+ QD
Subjt:  VEIIRNAVHFANDQLKAIAEWPNLQRQD

KAA0035408.1 retrotransposon protein [Cucumis melo var. makuwa]7.9e-2745.45Show/hide
Query:  MAEKMSGCHIQGSPTIDYRIKNMKKTFQTIAKMRRPSCNGFCWNDEVKCTIAENELFDNWV--------------------------------KGLDMSL
        MAEK+ GC ++ +  ID RIK +K+ FQ IA+MR P+C+GF WNDE KC IAE ELFDNWV                                +G+D+S 
Subjt:  MAEKMSGCHIQGSPTIDYRIKNMKKTFQTIAKMRRPSCNGFCWNDEVKCTIAENELFDNWV--------------------------------KGLDMSL

Query:  DDIIDTRPGRSSEGRSGSSRSKRKRRGPTIEIVEIIRNAVHFANDQLKAIAEWP
        DD+  +RP R+ EGR+GSSRSKRKR       VE I  A+   N+QL+ IAEWP
Subjt:  DDIIDTRPGRSSEGRSGSSRSKRKRRGPTIEIVEIIRNAVHFANDQLKAIAEWP

KAA0053511.1 retrotransposon protein [Cucumis melo var. makuwa]1.3e-2643.75Show/hide
Query:  MAEKMSGCHIQGSPTIDYRIKNMKKTFQTIAKMRRPSCNGFCWNDEVKCTIAENELFDNWVK--------------------------------------
        MAEK+ GC ++ +  ID RIK +K+TFQ I +MR P+C+GF WNDE KC +AE ELFDNWV+                                      
Subjt:  MAEKMSGCHIQGSPTIDYRIKNMKKTFQTIAKMRRPSCNGFCWNDEVKCTIAENELFDNWVK--------------------------------------

Query:  GLDMSLDDIIDTRPGRSSEGRSGSSRSKRKRRGPTIEIVEIIRNAVHFANDQLKAIAEWP
        G+D+S DD+  +RP R+SEGR+GSS SKRKR       VE I  A+   N+QLK IAEWP
Subjt:  GLDMSLDDIIDTRPGRSSEGRSGSSRSKRKRRGPTIEIVEIIRNAVHFANDQLKAIAEWP

KAA0060635.1 retrotransposon protein [Cucumis melo var. makuwa]5.8e-3054.69Show/hide
Query:  MAEKMSGCHIQGSPTIDYRIKNMKKTFQTIAKMRRPSCNGFCWNDEVKCTIAENELFDNWVKGLDMSLDDIIDTRPGRSSEGRSGSSRSKRKRRGPTIEI
        MA+KMSG +IQ + TID  IK M+KTF  I+++R PSC+GF WNDE+   I E ++FDNW+KGL+MS D+ +D+R GRS +GR+ SSR KRKR G  IE 
Subjt:  MAEKMSGCHIQGSPTIDYRIKNMKKTFQTIAKMRRPSCNGFCWNDEVKCTIAENELFDNWVKGLDMSLDDIIDTRPGRSSEGRSGSSRSKRKRRGPTIEI

Query:  VEIIRNAVHFANDQLKAIAEWPNLQRQD
          II+NA+ +AN QL  I +W  L+ QD
Subjt:  VEIIRNAVHFANDQLKAIAEWPNLQRQD

TYK02236.1 retrotransposon protein [Cucumis melo var. makuwa]5.8e-3054.69Show/hide
Query:  MAEKMSGCHIQGSPTIDYRIKNMKKTFQTIAKMRRPSCNGFCWNDEVKCTIAENELFDNWVKGLDMSLDDIIDTRPGRSSEGRSGSSRSKRKRRGPTIEI
        MA+KMSG +IQ + TID  IK M+KTF  I+++R PSC+GF WNDE+   I E ++FDNW+KGL+MS D+ +D+R GRS +GR+ SSR KRKR G  IE 
Subjt:  MAEKMSGCHIQGSPTIDYRIKNMKKTFQTIAKMRRPSCNGFCWNDEVKCTIAENELFDNWVKGLDMSLDDIIDTRPGRSSEGRSGSSRSKRKRRGPTIEI

Query:  VEIIRNAVHFANDQLKAIAEWPNLQRQD
          II+NA+ +AN QL  I +W  L+ QD
Subjt:  VEIIRNAVHFANDQLKAIAEWPNLQRQD

TrEMBL top hitse value%identityAlignment
A0A5A7SXS6 Retrotransposon protein3.8e-2745.45Show/hide
Query:  MAEKMSGCHIQGSPTIDYRIKNMKKTFQTIAKMRRPSCNGFCWNDEVKCTIAENELFDNWV--------------------------------KGLDMSL
        MAEK+ GC ++ +  ID RIK +K+ FQ IA+MR P+C+GF WNDE KC IAE ELFDNWV                                +G+D+S 
Subjt:  MAEKMSGCHIQGSPTIDYRIKNMKKTFQTIAKMRRPSCNGFCWNDEVKCTIAENELFDNWV--------------------------------KGLDMSL

Query:  DDIIDTRPGRSSEGRSGSSRSKRKRRGPTIEIVEIIRNAVHFANDQLKAIAEWP
        DD+  +RP R+ EGR+GSSRSKRKR       VE I  A+   N+QL+ IAEWP
Subjt:  DDIIDTRPGRSSEGRSGSSRSKRKRRGPTIEIVEIIRNAVHFANDQLKAIAEWP

A0A5A7UIZ2 Retrotransposon protein6.5e-2743.75Show/hide
Query:  MAEKMSGCHIQGSPTIDYRIKNMKKTFQTIAKMRRPSCNGFCWNDEVKCTIAENELFDNWVK--------------------------------------
        MAEK+ GC ++ +  ID RIK +K+TFQ I +MR P+C+GF WNDE KC +AE ELFDNWV+                                      
Subjt:  MAEKMSGCHIQGSPTIDYRIKNMKKTFQTIAKMRRPSCNGFCWNDEVKCTIAENELFDNWVK--------------------------------------

Query:  GLDMSLDDIIDTRPGRSSEGRSGSSRSKRKRRGPTIEIVEIIRNAVHFANDQLKAIAEWP
        G+D+S DD+  +RP R+SEGR+GSS SKRKR       VE I  A+   N+QLK IAEWP
Subjt:  GLDMSLDDIIDTRPGRSSEGRSGSSRSKRKRRGPTIEIVEIIRNAVHFANDQLKAIAEWP

A0A5A7V442 Retrotransposon protein2.8e-3054.69Show/hide
Query:  MAEKMSGCHIQGSPTIDYRIKNMKKTFQTIAKMRRPSCNGFCWNDEVKCTIAENELFDNWVKGLDMSLDDIIDTRPGRSSEGRSGSSRSKRKRRGPTIEI
        MA+KMSG +IQ + TID  IK M+KTF  I+++R PSC+GF WNDE+   I E ++FDNW+KGL+MS D+ +D+R GRS +GR+ SSR KRKR G  IE 
Subjt:  MAEKMSGCHIQGSPTIDYRIKNMKKTFQTIAKMRRPSCNGFCWNDEVKCTIAENELFDNWVKGLDMSLDDIIDTRPGRSSEGRSGSSRSKRKRRGPTIEI

Query:  VEIIRNAVHFANDQLKAIAEWPNLQRQD
          II+NA+ +AN QL  I +W  L+ QD
Subjt:  VEIIRNAVHFANDQLKAIAEWPNLQRQD

A0A5D3BVH6 Retrotransposon protein2.8e-3054.69Show/hide
Query:  MAEKMSGCHIQGSPTIDYRIKNMKKTFQTIAKMRRPSCNGFCWNDEVKCTIAENELFDNWVKGLDMSLDDIIDTRPGRSSEGRSGSSRSKRKRRGPTIEI
        MA+KMSG +IQ + TID  IK M+KTF  I+++R PSC+GF WNDE+   I E ++FDNW+KGL+MS D+ +D+R GRS +GR+ SSR KRKR G  IE 
Subjt:  MAEKMSGCHIQGSPTIDYRIKNMKKTFQTIAKMRRPSCNGFCWNDEVKCTIAENELFDNWVKGLDMSLDDIIDTRPGRSSEGRSGSSRSKRKRRGPTIEI

Query:  VEIIRNAVHFANDQLKAIAEWPNLQRQD
          II+NA+ +AN QL  I +W  L+ QD
Subjt:  VEIIRNAVHFANDQLKAIAEWPNLQRQD

E5GBS5 Uncharacterized protein1.6e-3357.81Show/hide
Query:  MAEKMSGCHIQGSPTIDYRIKNMKKTFQTIAKMRRPSCNGFCWNDEVKCTIAENELFDNWVKGLDMSLDDIIDTRPGRSSEGRSGSSRSKRKRRGPTIEI
        MA+KMSG +IQ + TID  IK M+KTF  I+++R PSC+GF WNDE+   I E ++FDNW+KGL+MS D+ +D+R GRS +GR+ SSRSKRKR G  IEI
Subjt:  MAEKMSGCHIQGSPTIDYRIKNMKKTFQTIAKMRRPSCNGFCWNDEVKCTIAENELFDNWVKGLDMSLDDIIDTRPGRSSEGRSGSSRSKRKRRGPTIEI

Query:  VEIIRNAVHFANDQLKAIAEWPNLQRQD
          II+NA+ +ANDQL  I +WP L+ QD
Subjt:  VEIIRNAVHFANDQLKAIAEWPNLQRQD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAGAAGATGTCAGGATGTCACATCCAGGGTTCGCCGACAATAGACTATCGAATAAAAAACATGAAGAAAACGTTTCAGACCATCGCAAAAATGCGCAGACCGTC
GTGTAATGGGTTTTGTTGGAACGATGAAGTTAAGTGCACCATCGCTGAGAATGAGTTGTTCGACAATTGGGTGAAGGGACTAGACATGTCGCTTGATGATATCATAGACA
CACGACCTGGTCGCTCGAGTGAAGGTAGGAGTGGTTCAAGTAGATCGAAGAGGAAGCGGAGAGGCCCGACGATAGAGATTGTGGAAATTATTCGCAATGCAGTGCATTTC
GCCAATGACCAGCTAAAGGCCATTGCAGAGTGGCCAAATTTACAACGTCAAGATAAGTGCGCCTCTCGTGCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAGAAGATGTCAGGATGTCACATCCAGGGTTCGCCGACAATAGACTATCGAATAAAAAACATGAAGAAAACGTTTCAGACCATCGCAAAAATGCGCAGACCGTC
GTGTAATGGGTTTTGTTGGAACGATGAAGTTAAGTGCACCATCGCTGAGAATGAGTTGTTCGACAATTGGGTGAAGGGACTAGACATGTCGCTTGATGATATCATAGACA
CACGACCTGGTCGCTCGAGTGAAGGTAGGAGTGGTTCAAGTAGATCGAAGAGGAAGCGGAGAGGCCCGACGATAGAGATTGTGGAAATTATTCGCAATGCAGTGCATTTC
GCCAATGACCAGCTAAAGGCCATTGCAGAGTGGCCAAATTTACAACGTCAAGATAAGTGCGCCTCTCGTGCGTAA
Protein sequenceShow/hide protein sequence
MAEKMSGCHIQGSPTIDYRIKNMKKTFQTIAKMRRPSCNGFCWNDEVKCTIAENELFDNWVKGLDMSLDDIIDTRPGRSSEGRSGSSRSKRKRRGPTIEIVEIIRNAVHF
ANDQLKAIAEWPNLQRQDKCASRA