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PI0028604 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028604
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr10:2921478..2925509
RNA-Seq ExpressionPI0028604
SyntenyPI0028604
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151688.1 uncharacterized protein LOC111019603 [Momordica charantia]9.0e-1440.16Show/hide
Query:  DPISWAIFKELLFDQYLHDTMEDKEGVFFL-LIQRCMLVAQYKRRFFELSHFSLDQIDTEQRKVKKFIKGLRKVIKRNSSSTCMTNYLCRGFFDRTLDRD
        +PI+W   K+LL+D Y   T++D++ + FL L QR ++VAQY+++F E S F+LD I TE RK+K+F++GL K IK        T Y         +D+D
Subjt:  DPISWAIFKELLFDQYLHDTMEDKEGVFFL-LIQRCMLVAQYKRRFFELSHFSLDQIDTEQRKVKKFIKGLRKVIKRNSSSTCMTNYLCRGFFDRTLDRD

Query:  -IPRVEQRREVGTSYGVKSNIPESSRS
         I + + +++VG S GVK  +P  S S
Subjt:  -IPRVEQRREVGTSYGVKSNIPESSRS

XP_022155872.1 uncharacterized protein LOC111022885 [Momordica charantia]2.9e-1241.67Show/hide
Query:  PISWAIFKELLFDQYLHDTMED-KEGVFFLLIQRCMLVAQYKRRFFELSHFSLDQIDTEQRKVKKFIKGLRKVIKRNSSSTCMTNYLCRGFFDRTLDRDI
        P++WA FK+LL+D Y  +T++D KE  F  L Q  + VAQY+R+F ELS F+ + I TE  K+K+F+KGLRK I+          Y         +D+D+
Subjt:  PISWAIFKELLFDQYLHDTMED-KEGVFFLLIQRCMLVAQYKRRFFELSHFSLDQIDTEQRKVKKFIKGLRKVIKRNSSSTCMTNYLCRGFFDRTLDRDI

Query:  P-RVEQRREVGTSYGVKSNI
          RV+   EVG+S GVK  +
Subjt:  P-RVEQRREVGTSYGVKSNI

XP_022155925.1 uncharacterized protein LOC111022925 [Momordica charantia]1.9e-1136.09Show/hide
Query:  PISWAIFKELLFDQYLHDTM-EDKEGVFFLLIQRCMLVAQYKRRFFELSHFSLDQIDTEQRKVKKFIKGLRKVIKRNSSSTCMTNYLCRGFFDRTLDRDI
        P++WA FK+LL++ Y   T+  +K   F  L Q  ++VAQY+R+F ELS F +  I TEQ K+ KFI GLR+ IK        T Y         +D+ +
Subjt:  PISWAIFKELLFDQYLHDTM-EDKEGVFFLLIQRCMLVAQYKRRFFELSHFSLDQIDTEQRKVKKFIKGLRKVIKRNSSSTCMTNYLCRGFFDRTLDRDI

Query:  PRVEQRREVGTSYGVKSNIPESSRSALVSVHLH
           + ++ +G+S GVK      S S     H H
Subjt:  PRVEQRREVGTSYGVKSNIPESSRSALVSVHLH

XP_022156326.1 uncharacterized protein LOC111023247 [Momordica charantia]2.0e-1342.28Show/hide
Query:  PISWAIFKELLFDQYLHDTMED-KEGVFFLLIQRCMLVAQYKRRFFELSHFSLDQIDTEQRKVKKFIKGLRKVIKRNSSSTCMTNYLCRGFFDRTLDRDI
        PI WA FK LL+D Y  +T++D KE  F  L+Q  + VAQY+R+F ELS F+L+ I TE  K+K+F+KGLRK I+        T Y         +D+D+
Subjt:  PISWAIFKELLFDQYLHDTMED-KEGVFFLLIQRCMLVAQYKRRFFELSHFSLDQIDTEQRKVKKFIKGLRKVIKRNSSSTCMTNYLCRGFFDRTLDRDI

Query:  P-RVEQRREVGTSYGVKSNIPES
          +     EVG+S GVK   P +
Subjt:  P-RVEQRREVGTSYGVKSNIPES

XP_022156546.1 uncharacterized protein LOC111023424 [Momordica charantia]1.8e-1442.98Show/hide
Query:  PISWAIFKELLFDQYLHDTMEDKEGVFFL-LIQRCMLVAQYKRRFFELSHFSLDQIDTEQRKVKKFIKGLRKVIKRNSSSTCMTNYLCRGFFDRTLDRDI
        P+ WA FK LL+D Y  +T+ED + V FL L+Q  + VAQY+R+F ELS F+L+ I TE  K+K+F+KGL K I+ +        Y         +D+D+
Subjt:  PISWAIFKELLFDQYLHDTMEDKEGVFFL-LIQRCMLVAQYKRRFFELSHFSLDQIDTEQRKVKKFIKGLRKVIKRNSSSTCMTNYLCRGFFDRTLDRDI

Query:  P-RVEQRREVGTSYGVKSNIP
          RV+   EVG+S GVK  +P
Subjt:  P-RVEQRREVGTSYGVKSNIP

TrEMBL top hitse value%identityAlignment
A0A6J1DCW8 uncharacterized protein LOC1110196034.4e-1440.16Show/hide
Query:  DPISWAIFKELLFDQYLHDTMEDKEGVFFL-LIQRCMLVAQYKRRFFELSHFSLDQIDTEQRKVKKFIKGLRKVIKRNSSSTCMTNYLCRGFFDRTLDRD
        +PI+W   K+LL+D Y   T++D++ + FL L QR ++VAQY+++F E S F+LD I TE RK+K+F++GL K IK        T Y         +D+D
Subjt:  DPISWAIFKELLFDQYLHDTMEDKEGVFFL-LIQRCMLVAQYKRRFFELSHFSLDQIDTEQRKVKKFIKGLRKVIKRNSSSTCMTNYLCRGFFDRTLDRD

Query:  -IPRVEQRREVGTSYGVKSNIPESSRS
         I + + +++VG S GVK  +P  S S
Subjt:  -IPRVEQRREVGTSYGVKSNIPESSRS

A0A6J1DNV8 uncharacterized protein LOC1110229259.1e-1236.09Show/hide
Query:  PISWAIFKELLFDQYLHDTM-EDKEGVFFLLIQRCMLVAQYKRRFFELSHFSLDQIDTEQRKVKKFIKGLRKVIKRNSSSTCMTNYLCRGFFDRTLDRDI
        P++WA FK+LL++ Y   T+  +K   F  L Q  ++VAQY+R+F ELS F +  I TEQ K+ KFI GLR+ IK        T Y         +D+ +
Subjt:  PISWAIFKELLFDQYLHDTM-EDKEGVFFLLIQRCMLVAQYKRRFFELSHFSLDQIDTEQRKVKKFIKGLRKVIKRNSSSTCMTNYLCRGFFDRTLDRDI

Query:  PRVEQRREVGTSYGVKSNIPESSRSALVSVHLH
           + ++ +G+S GVK      S S     H H
Subjt:  PRVEQRREVGTSYGVKSNIPESSRSALVSVHLH

A0A6J1DQJ4 uncharacterized protein LOC1110228851.4e-1241.67Show/hide
Query:  PISWAIFKELLFDQYLHDTMED-KEGVFFLLIQRCMLVAQYKRRFFELSHFSLDQIDTEQRKVKKFIKGLRKVIKRNSSSTCMTNYLCRGFFDRTLDRDI
        P++WA FK+LL+D Y  +T++D KE  F  L Q  + VAQY+R+F ELS F+ + I TE  K+K+F+KGLRK I+          Y         +D+D+
Subjt:  PISWAIFKELLFDQYLHDTMED-KEGVFFLLIQRCMLVAQYKRRFFELSHFSLDQIDTEQRKVKKFIKGLRKVIKRNSSSTCMTNYLCRGFFDRTLDRDI

Query:  P-RVEQRREVGTSYGVKSNI
          RV+   EVG+S GVK  +
Subjt:  P-RVEQRREVGTSYGVKSNI

A0A6J1DUM2 uncharacterized protein LOC1110232479.7e-1442.28Show/hide
Query:  PISWAIFKELLFDQYLHDTMED-KEGVFFLLIQRCMLVAQYKRRFFELSHFSLDQIDTEQRKVKKFIKGLRKVIKRNSSSTCMTNYLCRGFFDRTLDRDI
        PI WA FK LL+D Y  +T++D KE  F  L+Q  + VAQY+R+F ELS F+L+ I TE  K+K+F+KGLRK I+        T Y         +D+D+
Subjt:  PISWAIFKELLFDQYLHDTMED-KEGVFFLLIQRCMLVAQYKRRFFELSHFSLDQIDTEQRKVKKFIKGLRKVIKRNSSSTCMTNYLCRGFFDRTLDRDI

Query:  P-RVEQRREVGTSYGVKSNIPES
          +     EVG+S GVK   P +
Subjt:  P-RVEQRREVGTSYGVKSNIPES

A0A6J1DVA0 uncharacterized protein LOC1110234248.8e-1542.98Show/hide
Query:  PISWAIFKELLFDQYLHDTMEDKEGVFFL-LIQRCMLVAQYKRRFFELSHFSLDQIDTEQRKVKKFIKGLRKVIKRNSSSTCMTNYLCRGFFDRTLDRDI
        P+ WA FK LL+D Y  +T+ED + V FL L+Q  + VAQY+R+F ELS F+L+ I TE  K+K+F+KGL K I+ +        Y         +D+D+
Subjt:  PISWAIFKELLFDQYLHDTMEDKEGVFFL-LIQRCMLVAQYKRRFFELSHFSLDQIDTEQRKVKKFIKGLRKVIKRNSSSTCMTNYLCRGFFDRTLDRDI

Query:  P-RVEQRREVGTSYGVKSNIP
          RV+   EVG+S GVK  +P
Subjt:  P-RVEQRREVGTSYGVKSNIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTATGTTTCTAAGACTATGATAATATGTTTATGGTTTAATACAAAATTTGGATGTGGTAAAGGCAAGAACAAATTGGCGAATGACAAGAGGAATCCGTGGCCAAG
CCTTTGGGGATTTGACATTGCTTTCGCATATGTTTTTCTAAATTTAGTAGTTTTCAATTTACTTCAGCACCTTTCAGCCAGAACCTTGAGGCTGTTTTGCGAGTTAGGGG
AGGACTTTACTTGCTTAGAGGAGAGGCTCACATTTGATGGGGTTCACCTATTAGTAAGTCAATTGGACCCAATTTCTTGGGCAATATTCAAGGAATTATTATTTGATCAA
TATCTTCATGATACTATGGAAGATAAGGAAGGAGTGTTTTTCCTACTCATTCAAAGATGCATGTTAGTGGCACAATATAAGAGAAGGTTTTTTGAGTTGTCTCACTTCAG
CCTTGATCAGATAGATACAGAGCAAAGAAAGGTGAAGAAGTTCATTAAGGGCCTTCGTAAGGTGATAAAAAGGAATAGTAGTAGCACTTGTATGACGAACTACTTATGTC
GAGGCTTTTTCGATCGCACTCTGGATAGGGACATTCCAAGAGTGGAACAACGTAGGGAAGTAGGCACCTCCTATGGGGTTAAGTCTAATATTCCAGAAAGCTCAAGGAGT
GCCTTAGTGAGTGTGCATCTACATGTTGAGAGTGGACCTACTTTTGGAACCAAGAGAAAATCTCCTAAAGTGATAAAAGGGAATAGTAGCAGTTTTATGACCAACTACTT
ACGTCGAGGCTTTTTCAATCACAATGATTTTGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTATGTTTCTAAGACTATGATAATATGTTTATGGTTTAATACAAAATTTGGATGTGGTAAAGGCAAGAACAAATTGGCGAATGACAAGAGGAATCCGTGGCCAAG
CCTTTGGGGATTTGACATTGCTTTCGCATATGTTTTTCTAAATTTAGTAGTTTTCAATTTACTTCAGCACCTTTCAGCCAGAACCTTGAGGCTGTTTTGCGAGTTAGGGG
AGGACTTTACTTGCTTAGAGGAGAGGCTCACATTTGATGGGGTTCACCTATTAGTAAGTCAATTGGACCCAATTTCTTGGGCAATATTCAAGGAATTATTATTTGATCAA
TATCTTCATGATACTATGGAAGATAAGGAAGGAGTGTTTTTCCTACTCATTCAAAGATGCATGTTAGTGGCACAATATAAGAGAAGGTTTTTTGAGTTGTCTCACTTCAG
CCTTGATCAGATAGATACAGAGCAAAGAAAGGTGAAGAAGTTCATTAAGGGCCTTCGTAAGGTGATAAAAAGGAATAGTAGTAGCACTTGTATGACGAACTACTTATGTC
GAGGCTTTTTCGATCGCACTCTGGATAGGGACATTCCAAGAGTGGAACAACGTAGGGAAGTAGGCACCTCCTATGGGGTTAAGTCTAATATTCCAGAAAGCTCAAGGAGT
GCCTTAGTGAGTGTGCATCTACATGTTGAGAGTGGACCTACTTTTGGAACCAAGAGAAAATCTCCTAAAGTGATAAAAGGGAATAGTAGCAGTTTTATGACCAACTACTT
ACGTCGAGGCTTTTTCAATCACAATGATTTTGGATAG
Protein sequenceShow/hide protein sequence
MAYVSKTMIICLWFNTKFGCGKGKNKLANDKRNPWPSLWGFDIAFAYVFLNLVVFNLLQHLSARTLRLFCELGEDFTCLEERLTFDGVHLLVSQLDPISWAIFKELLFDQ
YLHDTMEDKEGVFFLLIQRCMLVAQYKRRFFELSHFSLDQIDTEQRKVKKFIKGLRKVIKRNSSSTCMTNYLCRGFFDRTLDRDIPRVEQRREVGTSYGVKSNIPESSRS
ALVSVHLHVESGPTFGTKRKSPKVIKGNSSSFMTNYLRRGFFNHNDFG