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PI0028640 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028640
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchr02:10066628..10067361
RNA-Seq ExpressionPI0028640
SyntenyPI0028640
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062291.1 hypothetical protein E6C27_scaffold154G00320 [Cucumis melo var. makuwa]1.8e-4268.15Show/hide
Query:  QKW----FYERSKVAFAMKTHLTSWIESMLRIEHERSRSLLVDPIRITEYKVMDGNQQFIVKLNLGSYSCRVWGVEEISCAHVLAVLRILNLDTYSYVSE
        +KW     + RSK A  MK+HLTSW E++LR+E E+SR LLVDPI  TEY+V DGNQQFIVKLN+G  SCRVW +EEI CAH LAVLR+LNLDTYSYVS+
Subjt:  QKW----FYERSKVAFAMKTHLTSWIESMLRIEHERSRSLLVDPIRITEYKVMDGNQQFIVKLNLGSYSCRVWGVEEISCAHVLAVLRILNLDTYSYVSE

Query:  FYSRETLSATYNRHVQPVGTHLDWKVEDAVMKTLL
        FY RETLSATYN   QPVG+H DW+V D VMK  L
Subjt:  FYSRETLSATYNRHVQPVGTHLDWKVEDAVMKTLL

XP_011654398.1 uncharacterized protein LOC105435382 [Cucumis sativus]3.6e-4353.14Show/hide
Query:  MMTSNCVESVNSMFKDLRELPVASMLSSIKDVLQKWFYERSKVAFAMKTHLTSWIESMLRIEHERSRSLLVDPIRITEYKVMDGNQQFIVKLNLGSYSCR
        MMT+N  ESVNS+ K+ R L VAS+L  I++ LQKWF++R + + +MKT LTSW ES+LR +HE SRS  V PI   EY VM G++Q IVKLNLGS SCR
Subjt:  MMTSNCVESVNSMFKDLRELPVASMLSSIKDVLQKWFYERSKVAFAMKTHLTSWIESMLRIEHERSRSLLVDPIRITEYKVMDGNQQFIVKLNLGSYSCR

Query:  VWGVEEISCAHVLAVLRILNLDTYSYVSEFYSRETLSATYNRHVQPVGTHLDWKVEDAVMKTLLPIVKCQARRPR
        VW   EI C+H L VL +LNL++YSYVS++Y  +TL +TY  HV P+G H +W++ +  +  L PI K    RP+
Subjt:  VWGVEEISCAHVLAVLRILNLDTYSYVSEFYSRETLSATYNRHVQPVGTHLDWKVEDAVMKTLLPIVKCQARRPR

XP_038896605.1 uncharacterized protein LOC120084863 [Benincasa hispida]1.4e-4452.84Show/hide
Query:  MMTSNCVESVNSMFKDLRELPVASMLSSIKDVLQKWFYERSKVAFAMKTHLTSWIESMLRIEHERSRSLLVDPIRITEYKVMDGNQQFIVKLNLGSYSCR
        MMT+N  E VN + K+ R LPVAS+L +I+ +LQKWF++R K + +M T LT W E++L  +HE+SRS ++ PI I EY VMDG++QF+VKLN  S S +
Subjt:  MMTSNCVESVNSMFKDLRELPVASMLSSIKDVLQKWFYERSKVAFAMKTHLTSWIESMLRIEHERSRSLLVDPIRITEYKVMDGNQQFIVKLNLGSYSCR

Query:  VWGVEEISCAHVLAVLRILNLDTYSYVSEFYSRETLSATYNRHVQPVGTHLDWKVEDAVMKTLLPIVKCQARRPRK
        VW  EEI C+HVL VLR+LN+D YSY+S +Y    LS TY   V+PVG H +W+V D  ++ L PI K  ARRP+K
Subjt:  VWGVEEISCAHVLAVLRILNLDTYSYVSEFYSRETLSATYNRHVQPVGTHLDWKVEDAVMKTLLPIVKCQARRPRK

XP_038904248.1 uncharacterized protein LOC120090597 [Benincasa hispida]6.5e-4552.84Show/hide
Query:  MMTSNCVESVNSMFKDLRELPVASMLSSIKDVLQKWFYERSKVAFAMKTHLTSWIESMLRIEHERSRSLLVDPIRITEYKVMDGNQQFIVKLNLGSYSCR
        MMT+N  E VNS+ K+ R LPVAS+L +I+ +L+ WF++R K +F+M T LT W E++L  +HE+SRS +V PI   +Y VMDG++QF+VKLNLGS SCR
Subjt:  MMTSNCVESVNSMFKDLRELPVASMLSSIKDVLQKWFYERSKVAFAMKTHLTSWIESMLRIEHERSRSLLVDPIRITEYKVMDGNQQFIVKLNLGSYSCR

Query:  VWGVEEISCAHVLAVLRILNLDTYSYVSEFYSRETLSATYNRHVQPVGTHLDWKVEDAVMKTLLPIVKCQARRPRK
        VW  EEISC+H L +L +LN+D YSYVS +Y   TLS TY   V+P+G H +W+V D  ++ L PI K  A  P+K
Subjt:  VWGVEEISCAHVLAVLRILNLDTYSYVSEFYSRETLSATYNRHVQPVGTHLDWKVEDAVMKTLLPIVKCQARRPRK

XP_038907134.1 uncharacterized protein LOC120092945 [Benincasa hispida]1.3e-4251.14Show/hide
Query:  MMTSNCVESVNSMFKDLRELPVASMLSSIKDVLQKWFYERSKVAFAMKTHLTSWIESMLRIEHERSRSLLVDPIRITEYKVMDGNQQFIVKLNLGSYSCR
        MMT+N  ES++S+ ++ RE P+AS+L SI+ +LQ WFYERSK+A +MKT LTSW E+ LR +H +SR+  VD I   EYKV+DG+  ++V +   S SC 
Subjt:  MMTSNCVESVNSMFKDLRELPVASMLSSIKDVLQKWFYERSKVAFAMKTHLTSWIESMLRIEHERSRSLLVDPIRITEYKVMDGNQQFIVKLNLGSYSCR

Query:  VWGVEEISCAHVLAVLRILNLDTYSYVSEFYSRETLSATYNRHVQPVGTHLDWKVEDAVMKTLLPIVKCQARRPRK
         W +EEI CAH  AVL  LNLD+Y++VS++Y   T S+TY R + P+G H DW   D     L PIVK Q  RPRK
Subjt:  VWGVEEISCAHVLAVLRILNLDTYSYVSEFYSRETLSATYNRHVQPVGTHLDWKVEDAVMKTLLPIVKCQARRPRK

TrEMBL top hitse value%identityAlignment
A0A5A7V9D5 SWIM-type domain-containing protein8.5e-4368.15Show/hide
Query:  QKW----FYERSKVAFAMKTHLTSWIESMLRIEHERSRSLLVDPIRITEYKVMDGNQQFIVKLNLGSYSCRVWGVEEISCAHVLAVLRILNLDTYSYVSE
        +KW     + RSK A  MK+HLTSW E++LR+E E+SR LLVDPI  TEY+V DGNQQFIVKLN+G  SCRVW +EEI CAH LAVLR+LNLDTYSYVS+
Subjt:  QKW----FYERSKVAFAMKTHLTSWIESMLRIEHERSRSLLVDPIRITEYKVMDGNQQFIVKLNLGSYSCRVWGVEEISCAHVLAVLRILNLDTYSYVSE

Query:  FYSRETLSATYNRHVQPVGTHLDWKVEDAVMKTLL
        FY RETLSATYN   QPVG+H DW+V D VMK  L
Subjt:  FYSRETLSATYNRHVQPVGTHLDWKVEDAVMKTLL

A0A5D3BD68 SWIM-type domain-containing protein1.5e-3947.73Show/hide
Query:  MMTSNCVESVNSMFKDLRELPVASMLSSIKDVLQKWFYERSKVAFAMKTHLTSWIESMLRIEHERSRSLLVDPIRITEYKVMDGNQQFIVKLNLGSYSCR
        +MT+N  ES+NS  K  R+LPVAS+L +I++ LQ+WFYER K A  +K+ L+SW E ++R   + SRS +V+P+   E++V+DG + F+VKLN  S SC 
Subjt:  MMTSNCVESVNSMFKDLRELPVASMLSSIKDVLQKWFYERSKVAFAMKTHLTSWIESMLRIEHERSRSLLVDPIRITEYKVMDGNQQFIVKLNLGSYSCR

Query:  VWGVEEISCAHVLAVLRILNLDTYSYVSEFYSRETLSATYNRHVQPVGTHLDWKVEDAVMKTLLPIVKCQARRPRK
         W +EEI CAH L V+R LNL+ Y++VS++Y    LSATY   V+P+G H DW V       L P+ +  A RPRK
Subjt:  VWGVEEISCAHVLAVLRILNLDTYSYVSEFYSRETLSATYNRHVQPVGTHLDWKVEDAVMKTLLPIVKCQARRPRK

A0A5D3BEQ2 SWIM-type domain-containing protein4.0e-4048.57Show/hide
Query:  MTSNCVESVNSMFKDLRELPVASMLSSIKDVLQKWFYERSKVAFAMKTHLTSWIESMLRIEHERSRSLLVDPIRITEYKVMDGNQQFIVKLNLGSYSCRV
        MT+N  ES+NS  K  R+LPVAS+L +I++ LQ+WFYER K A  +K+ L+SW E ++R   + SRS +V+P+   E++V+DG + F+VKLN  S SC  
Subjt:  MTSNCVESVNSMFKDLRELPVASMLSSIKDVLQKWFYERSKVAFAMKTHLTSWIESMLRIEHERSRSLLVDPIRITEYKVMDGNQQFIVKLNLGSYSCRV

Query:  WGVEEISCAHVLAVLRILNLDTYSYVSEFYSRETLSATYNRHVQPVGTHLDWKVEDAVMKTLLPIVKCQARRPRK
        W +EEISCAH L V+R LNL+ Y++VS++Y    LSATY   V+P+G H DW V +     L P+ +  A RPRK
Subjt:  WGVEEISCAHVLAVLRILNLDTYSYVSEFYSRETLSATYNRHVQPVGTHLDWKVEDAVMKTLLPIVKCQARRPRK

A0A5D3BVP4 SWIM-type domain-containing protein8.8e-4048Show/hide
Query:  MTSNCVESVNSMFKDLRELPVASMLSSIKDVLQKWFYERSKVAFAMKTHLTSWIESMLRIEHERSRSLLVDPIRITEYKVMDGNQQFIVKLNLGSYSCRV
        MT+N  ES+NS  K  R+LPVAS+L +I++ LQ+WFYER K A  +K+ L+SW E ++R   + SRS +V+P+   E++V+DG + F+VKLN  S SC  
Subjt:  MTSNCVESVNSMFKDLRELPVASMLSSIKDVLQKWFYERSKVAFAMKTHLTSWIESMLRIEHERSRSLLVDPIRITEYKVMDGNQQFIVKLNLGSYSCRV

Query:  WGVEEISCAHVLAVLRILNLDTYSYVSEFYSRETLSATYNRHVQPVGTHLDWKVEDAVMKTLLPIVKCQARRPRK
        W +EEI CAH L V+R LNL+ Y++VS++Y    LSATY   V+P+G H DW V +     L P+ +  A RPRK
Subjt:  WGVEEISCAHVLAVLRILNLDTYSYVSEFYSRETLSATYNRHVQPVGTHLDWKVEDAVMKTLLPIVKCQARRPRK

A0A5D3DJR8 MuDR family transposase1.3e-3853.33Show/hide
Query:  MMTSNCVESVNSMFKDLRELPVASMLSSIKDVLQKWFYERSKVAFAMKTHLTSWIESMLRIEHERSRSLLVDPIRITEYKVMDGNQQFIVKLNLGSYSCR
        MMT+N  ES+N++ K+ R+LPVA++L SI+ +LQ WFY+R KVA  M+T LTSW E  LRI+H+ SRS  V+ I   E++V+DG +QFIV+L+  S +CR
Subjt:  MMTSNCVESVNSMFKDLRELPVASMLSSIKDVLQKWFYERSKVAFAMKTHLTSWIESMLRIEHERSRSLLVDPIRITEYKVMDGNQQFIVKLNLGSYSCR

Query:  VWGVEEISCAHVLAVLRILNLDTYSYVSEFYSRETLSATYNRHVQPVGTH
        VW ++EI CAH LAVLR  N++TYS+VS+++   TL +TY   V+PVG H
Subjt:  VWGVEEISCAHVLAVLRILNLDTYSYVSEFYSRETLSATYNRHVQPVGTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G64260.1 MuDR family transposase3.7e-0632.58Show/hide
Query:  YKVMDGN--QQFIVKLNLGSYSCRVWGVEEISCAHVLAVLRILNLDTYSYVSEFYSRETLSATYNRHVQPVGTHLDWKVEDAVMKTLLP
        +KV + +  +++IV+LN+ + +CR +   +  C H LAV   L ++   YV E Y+ E    TY     PV     W  ED  + TL P
Subjt:  YKVMDGN--QQFIVKLNLGSYSCRVWGVEEISCAHVLAVLRILNLDTYSYVSEFYSRETLSATYNRHVQPVGTHLDWKVEDAVMKTLLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGACATCAAATTGTGTAGAAAGTGTAAACTCAATGTTTAAAGATCTTAGAGAATTACCTGTGGCTAGCATGCTTAGTTCAATTAAAGATGTATTGCAAAAATGGTT
TTATGAACGAAGTAAAGTTGCTTTTGCAATGAAGACTCATTTGACTTCTTGGATTGAGAGCATGTTACGAATAGAACACGAAAGGTCAAGAAGTTTATTGGTTGATCCCA
TTAGGATCACCGAATACAAAGTAATGGATGGAAATCAACAATTCATAGTGAAGTTAAACTTGGGATCTTATAGTTGTCGAGTATGGGGTGTTGAGGAAATTTCATGTGCA
CATGTCCTTGCTGTTCTACGAATACTTAATTTAGATACTTATTCTTATGTATCTGAGTTTTATTCTAGAGAAACACTATCAGCAACATACAATCGTCATGTTCAACCTGT
TGGAACTCATTTGGATTGGAAAGTTGAAGATGCTGTCATGAAAACATTACTTCCTATCGTCAAATGTCAAGCTAGAAGACCTAGAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGATGACATCAAATTGTGTAGAAAGTGTAAACTCAATGTTTAAAGATCTTAGAGAATTACCTGTGGCTAGCATGCTTAGTTCAATTAAAGATGTATTGCAAAAATGGTT
TTATGAACGAAGTAAAGTTGCTTTTGCAATGAAGACTCATTTGACTTCTTGGATTGAGAGCATGTTACGAATAGAACACGAAAGGTCAAGAAGTTTATTGGTTGATCCCA
TTAGGATCACCGAATACAAAGTAATGGATGGAAATCAACAATTCATAGTGAAGTTAAACTTGGGATCTTATAGTTGTCGAGTATGGGGTGTTGAGGAAATTTCATGTGCA
CATGTCCTTGCTGTTCTACGAATACTTAATTTAGATACTTATTCTTATGTATCTGAGTTTTATTCTAGAGAAACACTATCAGCAACATACAATCGTCATGTTCAACCTGT
TGGAACTCATTTGGATTGGAAAGTTGAAGATGCTGTCATGAAAACATTACTTCCTATCGTCAAATGTCAAGCTAGAAGACCTAGAAAATAA
Protein sequenceShow/hide protein sequence
MMTSNCVESVNSMFKDLRELPVASMLSSIKDVLQKWFYERSKVAFAMKTHLTSWIESMLRIEHERSRSLLVDPIRITEYKVMDGNQQFIVKLNLGSYSCRVWGVEEISCA
HVLAVLRILNLDTYSYVSEFYSRETLSATYNRHVQPVGTHLDWKVEDAVMKTLLPIVKCQARRPRK