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PI0028673 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028673
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCACTA en-spm transposon protein
Genome locationchr12:18165053..18167233
RNA-Seq ExpressionPI0028673
SyntenyPI0028673
Gene Ontology termsGO:0016829 - lyase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031912.1 (R)-mandelonitrile lyase 1-like [Cucumis melo var. makuwa]4.6e-0763.46Show/hide
Query:  EVDHEFRELDISPHTGSLVGETSDDCSSSTRRTRKHSQNIELEKYVNKHGKI
        E D  F ELDISP+T S VG+TSDD S  T +T  HS+N+ELEKYV+KHGK+
Subjt:  EVDHEFRELDISPHTGSLVGETSDDCSSSTRRTRKHSQNIELEKYVNKHGKI

KAA0038006.1 (R)-mandelonitrile lyase 1-like [Cucumis melo var. makuwa]1.5e-1073.08Show/hide
Query:  FRELDISPHTGSLVGETSDDCSSSTRRTRKHSQNIELEKYVNKHGKIPISIT
        F+EL+ISPHTGSLVG+TS+  S  TR+TR HS+N+ELEKY+ KHGKIPISIT
Subjt:  FRELDISPHTGSLVGETSDDCSSSTRRTRKHSQNIELEKYVNKHGKIPISIT

KAA0060467.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]9.8e-1042.86Show/hide
Query:  SLVGETSDDCS-SSTRRTRKHSQNIELEKYVNKHGKIPISITPRQSE-----------------LSERGEPVGRVDLFKETYSNKSGQFVNQATEDAH
        S V   SDD   + T R R++SQN+ELE+YV K+GKI I+I PR  +                   ERG+PVG V+LF+ET++N+SGQF++    +AH
Subjt:  SLVGETSDDCS-SSTRRTRKHSQNIELEKYVNKHGKIPISITPRQSE-----------------LSERGEPVGRVDLFKETYSNKSGQFVNQATEDAH

KAA0066009.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]8.6e-0648Show/hide
Query:  KHSQNIELEKYVNKHGKIPISITPRQS------------ELSE-RGEPVGRVDLFKETYSNKSGQFVNQATEDAH
        +H +N+EL++YV ++GKIPISI   Q             EL+E RG P+ RV+LF ETY+ +SGQFV  A  DAH
Subjt:  KHSQNIELEKYVNKHGKIPISITPRQS------------ELSE-RGEPVGRVDLFKETYSNKSGQFVNQATEDAH

XP_031737881.1 uncharacterized protein LOC116402552 [Cucumis sativus]5.6e-0563.41Show/hide
Query:  ITPRQSELSERGEPVGRVDLFKETYSNKSGQFVNQATEDAH
        I P+     +R EPVGRV+LFKET++NKSGQFVNQA +D H
Subjt:  ITPRQSELSERGEPVGRVDLFKETYSNKSGQFVNQATEDAH

TrEMBL top hitse value%identityAlignment
A0A5A7SLE3 (R)-mandelonitrile lyase 1-like2.2e-0763.46Show/hide
Query:  EVDHEFRELDISPHTGSLVGETSDDCSSSTRRTRKHSQNIELEKYVNKHGKI
        E D  F ELDISP+T S VG+TSDD S  T +T  HS+N+ELEKYV+KHGK+
Subjt:  EVDHEFRELDISPHTGSLVGETSDDCSSSTRRTRKHSQNIELEKYVNKHGKI

A0A5A7V0Y7 CACTA en-spm transposon protein4.8e-1042.86Show/hide
Query:  SLVGETSDDCS-SSTRRTRKHSQNIELEKYVNKHGKIPISITPRQSE-----------------LSERGEPVGRVDLFKETYSNKSGQFVNQATEDAH
        S V   SDD   + T R R++SQN+ELE+YV K+GKI I+I PR  +                   ERG+PVG V+LF+ET++N+SGQF++    +AH
Subjt:  SLVGETSDDCS-SSTRRTRKHSQNIELEKYVNKHGKIPISITPRQSE-----------------LSERGEPVGRVDLFKETYSNKSGQFVNQATEDAH

A0A5D3BVT3 (R)-mandelonitrile lyase 1-like7.3e-1173.08Show/hide
Query:  FRELDISPHTGSLVGETSDDCSSSTRRTRKHSQNIELEKYVNKHGKIPISIT
        F+EL+ISPHTGSLVG+TS+  S  TR+TR HS+N+ELEKY+ KHGKIPISIT
Subjt:  FRELDISPHTGSLVGETSDDCSSSTRRTRKHSQNIELEKYVNKHGKIPISIT

A0A5D3D3W6 CACTA en-spm transposon protein6.0e-0536.28Show/hide
Query:  SPHTGSLVGETSDDCSSSTRRTRKHSQNIELEKYVNKHGKIPISITP---------------------------RQSELSE-RGEPVGRVDLFKETYSNK
        S   G   G +S   + + RR R  S+ +ELE++V  +G+IP++I P                           RQ EL+E RG+PV RV+LF+ET+  +
Subjt:  SPHTGSLVGETSDDCSSSTRRTRKHSQNIELEKYVNKHGKIPISITP---------------------------RQSELSE-RGEPVGRVDLFKETYSNK

Query:  SGQFVNQATEDAH
        +G FV+QA EDAH
Subjt:  SGQFVNQATEDAH

A0A5D3DYI9 CACTA en-spm transposon protein4.2e-0648Show/hide
Query:  KHSQNIELEKYVNKHGKIPISITPRQS------------ELSE-RGEPVGRVDLFKETYSNKSGQFVNQATEDAH
        +H +N+EL++YV ++GKIPISI   Q             EL+E RG P+ RV+LF ETY+ +SGQFV  A  DAH
Subjt:  KHSQNIELEKYVNKHGKIPISITPRQS------------ELSE-RGEPVGRVDLFKETYSNKSGQFVNQATEDAH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACTGCGAGGTAGACCATGAGTTTCGTGAGTTGGATATATCCCCTCACACGGGATCCTTGGTGGGTGAAACTTCAGACGACTGCTCTTCATCCACTCGTAGGACACG
CAAGCACTCACAAAACATTGAGTTGGAGAAATATGTAAACAAACATGGAAAAATTCCAATCTCTATCACACCGAGACAATCTGAGCTCAGTGAACGAGGTGAACCAGTGG
GACGTGTGGACCTATTCAAAGAAACGTACTCCAATAAGAGTGGCCAGTTTGTGAATCAGGCAACTGAAGATGCACATGTAAAAGAGTTGTTCGAAGATGACGTCGGAAGA
TGGGTTTTGGAGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCACTGCGAGGTAGACCATGAGTTTCGTGAGTTGGATATATCCCCTCACACGGGATCCTTGGTGGGTGAAACTTCAGACGACTGCTCTTCATCCACTCGTAGGACACG
CAAGCACTCACAAAACATTGAGTTGGAGAAATATGTAAACAAACATGGAAAAATTCCAATCTCTATCACACCGAGACAATCTGAGCTCAGTGAACGAGGTGAACCAGTGG
GACGTGTGGACCTATTCAAAGAAACGTACTCCAATAAGAGTGGCCAGTTTGTGAATCAGGCAACTGAAGATGCACATGTAAAAGAGTTGTTCGAAGATGACGTCGGAAGA
TGGGTTTTGGAGAGATGA
Protein sequenceShow/hide protein sequence
MHCEVDHEFRELDISPHTGSLVGETSDDCSSSTRRTRKHSQNIELEKYVNKHGKIPISITPRQSELSERGEPVGRVDLFKETYSNKSGQFVNQATEDAHVKELFEDDVGR
WVLER