CuGenDBv2

Gene ID	PI0028739
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	F-box domain-containing protein
Genome location	chr06:8377558..8380193
RNA-Seq Expression	PI0028739
Synteny	PI0028739
Gene Ontology terms	GO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (biological process) GO:0019005 - SCF ubiquitin ligase complex (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR001810 - F-box domain IPR036047 - F-box-like domain superfamily IPR045118 - F-box only protein FBXO9/FBXO48

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7014689.1 pof10 [Cucurbita argyrosperma subsp. argyrosperma]

1.6e-85

94.48

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Query:  MEKLPTEICLKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPIGSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ
        ME+LP EICLKIFC LDSQ+LATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHP+GSKSWKDSYEVQDRCDRFGLGLRIIREG+DYYLIHQGEIQ
Subjt:  MEKLPTEICLKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPIGSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ

Query:  RHLGSRRQKNGQTSFLPLSSKREFLSEGLLEDDKSCRGILDRILFFIGDLEVASTDAKRSRSL
        RHLGSRRQKNGQTSFLPLSSKRE LSEGLLE+DKSCRGILDRILFFIGDLEVASTDAKRSR+L
Subjt:  RHLGSRRQKNGQTSFLPLSSKREFLSEGLLEDDKSCRGILDRILFFIGDLEVASTDAKRSRSL

XP_004146236.1 F-box/WD repeat-containing protein pof1 [Cucumis sativus]

5.2e-89

98.77

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Query:  MEKLPTEICLKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPIGSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ
        MEKLPTEIC KIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPIGSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ
Subjt:  MEKLPTEICLKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPIGSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ

Query:  RHLGSRRQKNGQTSFLPLSSKREFLSEGLLEDDKSCRGILDRILFFIGDLEVASTDAKRSRSL
        RHLGSRRQKNGQTSFLPLSSKREFLSEGLLE+DKSCRGILDRILFFIGDLEVASTDAKRSRSL
Subjt:  RHLGSRRQKNGQTSFLPLSSKREFLSEGLLEDDKSCRGILDRILFFIGDLEVASTDAKRSRSL

XP_008455999.1 PREDICTED: uncharacterized protein LOC103496056 [Cucumis melo]

7.5e-88

98.16

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Query:  MEKLPTEICLKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPIGSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ
        MEKLPTEICLKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGED AAFYHP GSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ
Subjt:  MEKLPTEICLKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPIGSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ

Query:  RHLGSRRQKNGQTSFLPLSSKREFLSEGLLEDDKSCRGILDRILFFIGDLEVASTDAKRSRSL
        RHLGSRRQKNGQTSFLPLSSKREFLSEGLLE+DKSCRGILDRILFFIGDLEVASTDAKRSRSL
Subjt:  RHLGSRRQKNGQTSFLPLSSKREFLSEGLLEDDKSCRGILDRILFFIGDLEVASTDAKRSRSL

XP_022923080.1 F-box protein SKIP31-like isoform X1 [Cucurbita moschata]

1.6e-85

94.48

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Query:  MEKLPTEICLKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPIGSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ
        ME+LP EICLKIFCFLDSQ+LATALQVCRKWN LASDNILWSNLFKERWGEDHAAFYHP+GSKSWKDSYEVQDRCDRFGLGLRIIREG+DYYLIHQGEIQ
Subjt:  MEKLPTEICLKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPIGSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ

Query:  RHLGSRRQKNGQTSFLPLSSKREFLSEGLLEDDKSCRGILDRILFFIGDLEVASTDAKRSRSL
        RHLGSRRQKNGQTSFLPLSSKRE LSEGLLE+DKSCRGILDRILFFIGDLEVASTDAKRSR+L
Subjt:  RHLGSRRQKNGQTSFLPLSSKREFLSEGLLEDDKSCRGILDRILFFIGDLEVASTDAKRSRSL

XP_023553429.1 uncharacterized protein LOC111810852 [Cucurbita pepo subsp. pepo]

1.6e-85

94.48

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Query:  MEKLPTEICLKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPIGSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ
        ME+LP EICLKIFC LDSQ+LATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHP+GSKSWKDSYEVQDRCDRFGLGLRIIREG+DYYLIHQGEIQ
Subjt:  MEKLPTEICLKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPIGSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ

Query:  RHLGSRRQKNGQTSFLPLSSKREFLSEGLLEDDKSCRGILDRILFFIGDLEVASTDAKRSRSL
        RHLGSRRQKNGQTSFLPLSSKRE LSEGLLE+DKSCRGILDRILFFIGDLEVASTDAKRSR+L
Subjt:  RHLGSRRQKNGQTSFLPLSSKREFLSEGLLEDDKSCRGILDRILFFIGDLEVASTDAKRSRSL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LAG9 F-box domain-containing protein

2.5e-89

98.77

Show/hide

Query:  MEKLPTEICLKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPIGSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ
        MEKLPTEIC KIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPIGSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ
Subjt:  MEKLPTEICLKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPIGSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ

Query:  RHLGSRRQKNGQTSFLPLSSKREFLSEGLLEDDKSCRGILDRILFFIGDLEVASTDAKRSRSL
        RHLGSRRQKNGQTSFLPLSSKREFLSEGLLE+DKSCRGILDRILFFIGDLEVASTDAKRSRSL
Subjt:  RHLGSRRQKNGQTSFLPLSSKREFLSEGLLEDDKSCRGILDRILFFIGDLEVASTDAKRSRSL

A0A1S3C264 uncharacterized protein LOC103496056

3.6e-88

98.16

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Query:  MEKLPTEICLKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPIGSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ
        MEKLPTEICLKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGED AAFYHP GSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ
Subjt:  MEKLPTEICLKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPIGSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ

Query:  RHLGSRRQKNGQTSFLPLSSKREFLSEGLLEDDKSCRGILDRILFFIGDLEVASTDAKRSRSL
        RHLGSRRQKNGQTSFLPLSSKREFLSEGLLE+DKSCRGILDRILFFIGDLEVASTDAKRSRSL
Subjt:  RHLGSRRQKNGQTSFLPLSSKREFLSEGLLEDDKSCRGILDRILFFIGDLEVASTDAKRSRSL

A0A6J1CGG1 uncharacterized protein LOC111011451

4.1e-84

92.02

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Query:  MEKLPTEICLKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPIGSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ
        ME+LP E+CLKIFC LDSQNLATALQVC KWNSLASDN+LWS+LFKERWGEDHAAFYHPIGSKSWKD+YEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ
Subjt:  MEKLPTEICLKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPIGSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ

Query:  RHLGSRRQKNGQTSFLPLSSKREFLSEGLLEDDKSCRGILDRILFFIGDLEVASTDAKRSRSL
        RHLGSRRQKNGQ +FLPLSSKREFLSEG+LE+DKSCRGILDRILFFIGDLEVASTDAKRSR L
Subjt:  RHLGSRRQKNGQTSFLPLSSKREFLSEGLLEDDKSCRGILDRILFFIGDLEVASTDAKRSRSL

A0A6J1EAN4 F-box protein SKIP31-like isoform X1

7.5e-86

94.48

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Query:  MEKLPTEICLKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPIGSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ
        ME+LP EICLKIFCFLDSQ+LATALQVCRKWN LASDNILWSNLFKERWGEDHAAFYHP+GSKSWKDSYEVQDRCDRFGLGLRIIREG+DYYLIHQGEIQ
Subjt:  MEKLPTEICLKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPIGSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ

Query:  RHLGSRRQKNGQTSFLPLSSKREFLSEGLLEDDKSCRGILDRILFFIGDLEVASTDAKRSRSL
        RHLGSRRQKNGQTSFLPLSSKRE LSEGLLE+DKSCRGILDRILFFIGDLEVASTDAKRSR+L
Subjt:  RHLGSRRQKNGQTSFLPLSSKREFLSEGLLEDDKSCRGILDRILFFIGDLEVASTDAKRSRSL

A0A6J1J5J1 uncharacterized protein LOC111482802

1.7e-85

93.87

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Query:  MEKLPTEICLKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPIGSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ
        ME+LP EICLKIFC LDSQ+LATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHP+GSKSWKDSYEVQDRCDRFGLGLRIIREG+DYYLIHQGEIQ
Subjt:  MEKLPTEICLKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPIGSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQ

Query:  RHLGSRRQKNGQTSFLPLSSKREFLSEGLLEDDKSCRGILDRILFFIGDLEVASTDAKRSRSL
        RHLGSRRQKNGQTSFLPLSSKRE LSEGLL++DKSCRGILDRILFFIGDLEVASTDAKRSR+L
Subjt:  RHLGSRRQKNGQTSFLPLSSKREFLSEGLLEDDKSCRGILDRILFFIGDLEVASTDAKRSRSL

SwissProt top hits

e value

%identity

Alignment

A1C7E4 Probable E3 ubiquitin ligase complex SCF subunit sconB

6.3e-05

43.18

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Query:  LPTEICLKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKE
        LP EI  KI C+LD+ +L  A QV R+W +LA D+++W  + ++
Subjt:  LPTEICLKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKE

B0XTS1 Probable E3 ubiquitin ligase complex SCF subunit sconB

6.3e-05

43.18

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Query:  LPTEICLKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKE
        LP EI  KI C+LD+ +L  A QV R+W +LA D+++W  + ++
Subjt:  LPTEICLKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKE

Q7TPD1 F-box only protein 11

2.2e-05

Show/hide

Query:  EKLPTEICLKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKE
        EKLP E+ LKIF +L  Q+L  A  VC++++ LA+D ILW  L+ E
Subjt:  EKLPTEICLKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKE

Q7TSL3 F-box only protein 11

2.2e-05

Show/hide

Query:  EKLPTEICLKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKE
        EKLP E+ LKIF +L  Q+L  A  VC++++ LA+D ILW  L+ E
Subjt:  EKLPTEICLKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKE

Q86XK2 F-box only protein 11

2.2e-05

Show/hide

Query:  EKLPTEICLKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKE
        EKLP E+ LKIF +L  Q+L  A  VC++++ LA+D ILW  L+ E
Subjt:  EKLPTEICLKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKE

Arabidopsis top hits

e value

%identity

Alignment

AT5G45360.1 F-box family protein

4.9e-05

Show/hide

Query:  LPTEICLKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPIGSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYL
        +PTE+   I  FL S++L +   VC+  N  A+D  LW  L+  RWG    +    +   +WK  Y  +D  D   L      +  +YY+
Subjt:  LPTEICLKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPIGSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYL

AT5G52880.1 F-box family protein

4.2e-04

28.36

Show/hide

Query:  LPTEICLKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPIGSKSWKDSYE
        LP +I + IF FL+  +L ++ QV R WN    +N LW + F   +  +H           W+++++
Subjt:  LPTEICLKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPIGSKSWKDSYE

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGAAAAATTGCCAACCGAAATCTGCTTGAAGATTTTCTGTTTCTTGGATTCCCAGAACCTTGCAACCGCACTTCAAGTTTGCAGGAAGTGGAACTCCTTAGCTTCAGA
CAATATCTTGTGGTCAAATTTATTCAAGGAGAGGTGGGGGGAAGACCATGCTGCATTTTATCACCCAATTGGTTCAAAGTCATGGAAGGATTCATATGAGGTGCAAGATC
GATGTGATCGATTTGGACTGGGCCTAAGAATTATCCGAGAAGGGAATGACTACTATCTCATTCACCAAGGTGAAATCCAGAGGCACCTAGGTTCAAGAAGACAAAAGAAT
GGACAGACCAGTTTTCTTCCTTTGAGTTCAAAAAGAGAGTTCCTATCAGAAGGACTTCTCGAAGATGACAAATCCTGTCGAGGAATTCTGGACAGGATCCTTTTCTTCAT
TGGAGACTTGGAAGTTGCTTCAACAGATGCAAAGCGTAGCAGGTCTCTGTGA

mRNA sequence

Show/hide mRNA sequence

ATAGAAGAGTAAAAAGGGGCGAGTATACTGCTTTTCTATACTCTCAAGAAACACCAATTGAAAATGGCCTTTTTGATGTTCTTCTTTATTACAATTATCTTCATTGTCCA
AAAATAAAGAAAATGTAGATCAATCAGCTTGAAGACGAAGACTGTATCCATAACCCAAAAGAACACCTCAAAGTTCTTCCTCTCTGTCTCTTTTCTGCCGAGTTTTCTCC
ACAATTCTTTGTTTCGGTGGACAGGAATTTGTTTATCATATCTGATCCATCTTCAGATGGAAAAATTGCCAACCGAAATCTGCTTGAAGATTTTCTGTTTCTTGGATTCC
CAGAACCTTGCAACCGCACTTCAAGTTTGCAGGAAGTGGAACTCCTTAGCTTCAGACAATATCTTGTGGTCAAATTTATTCAAGGAGAGGTGGGGGGAAGACCATGCTGC
ATTTTATCACCCAATTGGTTCAAAGTCATGGAAGGATTCATATGAGGTGCAAGATCGATGTGATCGATTTGGACTGGGCCTAAGAATTATCCGAGAAGGGAATGACTACT
ATCTCATTCACCAAGGTGAAATCCAGAGGCACCTAGGTTCAAGAAGACAAAAGAATGGACAGACCAGTTTTCTTCCTTTGAGTTCAAAAAGAGAGTTCCTATCAGAAGGA
CTTCTCGAAGATGACAAATCCTGTCGAGGAATTCTGGACAGGATCCTTTTCTTCATTGGAGACTTGGAAGTTGCTTCAACAGATGCAAAGCGTAGCAGGTCTCTGTGAAG
CTTCCTTCAGTCAGCAAAAATTATGTGAATTTTATGTATAATGTTTATATTTGTTTATGTTGACATTGAATTCTGGCAAATGTAGAATATACATCTCATGTTCATTTGAA
ATGCAATAAATAAGTTCATCTTCTTCA

Protein sequence

Show/hide protein sequence

MEKLPTEICLKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPIGSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQRHLGSRRQKN
GQTSFLPLSSKREFLSEGLLEDDKSCRGILDRILFFIGDLEVASTDAKRSRSL

PI0028739 (gene) of Melon (PI 482460) v1 genome