; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0028742 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028742
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr10:13955400..13957322
RNA-Seq ExpressionPI0028742
SyntenyPI0028742
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR024752 - Myb/SANT-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34114.1 retrotransposon protein [Cucumis melo subsp. melo]2.8e-8338.92Show/hide
Query:  MAMFLHVLAHDMKNRVIQREFLRSGETISRYFNLVLLTVLRLSDELLAKPQRVTNGCTDARW--------------------------------------
        +AMFLH+LAHD+K+RVI+REF+RSGETISR+FN+VLL V+RL +ELL KPQ V N CTD RW                                      
Subjt:  MAMFLHVLAHDMKNRVIQREFLRSGETISRYFNLVLLTVLRLSDELLAKPQRVTNGCTDARW--------------------------------------

Query:  -----------------------NEVVRGTIS-------------------------MATVR--------------------------------------
                               + ++R  +S                         +A  R                                      
Subjt:  -----------------------NEVVRGTIS-------------------------MATVR--------------------------------------

Query:  ----------------------------------------------------------------------------------IMATSSRALKHHWTKEED
                                                                                          IM +SSR  KH WTKEE+
Subjt:  ----------------------------------------------------------------------------------IMATSSRALKHHWTKEED

Query:  TTLVECLVELVSAGGWRSNNGTFRPGYHSHLQKMMAERMPGHNITASTIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCIIAEKDLYDNWVKSHPAA
          LVECLVELV+AGGWRS+NGTFRPGY + L +MMA ++PG NI ASTID RIK MKR F A++EMRGP CSGFGWNDE KCI+AEK+++D+W  SHPAA
Subjt:  TTLVECLVELVSAGGWRSNNGTFRPGYHSHLQKMMAERMPGHNITASTIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCIIAEKDLYDNWVKSHPAA

Query:  KGLLNKPFPHYDDLCYVFGRDRATGGRAKTFADVGSNVLAEYDGFLAYDGNDVEFPTMYSQGLDMSPDDIMGTRPTRLSEGR---AGSKRKRGRQAFEVA
        KGLLNK F HYD+L YVFG+DRATGGRA++FAD+GSN    YD   A    D +FP MYS GL+MSPDD+M TR  R+SE R   +GSKRKR   A +  
Subjt:  KGLLNKPFPHYDDLCYVFGRDRATGGRAKTFADVGSNVLAEYDGFLAYDGNDVEFPTMYSQGLDMSPDDIMGTRPTRLSEGR---AGSKRKRGRQAFEVA

Query:  EIIRSAMEYANDQLKAIAE
        +I+R+A+EY N+QL  IAE
Subjt:  EIIRSAMEYANDQLKAIAE

KAA0032766.1 retrotransposon protein [Cucumis melo var. makuwa]5.2e-8265.13Show/hide
Query:  MATSSRALKHHWTKEEDTTLVECLVELVSAGGWRSNNGTFRPGYHSHLQKMMAERMPGHNITAST-IDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKC
        M+TS+RA +H WT+EE+ TLVECL+ELVS GGW+S+NGTFRPGY + L +MMAE++PG  + A+T IDCRIKT+KR FQAI+EMRGP CSGFGWNDE KC
Subjt:  MATSSRALKHHWTKEEDTTLVECLVELVSAGGWRSNNGTFRPGYHSHLQKMMAERMPGHNITAST-IDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKC

Query:  IIAEKDLYDNWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFADVGSNVL-AEYDGFLAYDGNDVEFPTMYSQGLDMSPDDIMGTRPTRLSEG
        I+AEK+L+DNWV+SHPAAKGLLNKPFP+YD+L YVFGRDRATG  A+TFADVGSN     YD F   DGN+ +FP +YSQG+D+S DD+  +RP+R SEG
Subjt:  IIAEKDLYDNWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFADVGSNVL-AEYDGFLAYDGNDVEFPTMYSQGLDMSPDDIMGTRPTRLSEG

Query:  R---AGSKRKRGRQAFEVAEIIRSAMEYANDQLKAIAE
        R   +GSKRKRG Q     E I  A++  N+QL+ IAE
Subjt:  R---AGSKRKRGRQAFEVAEIIRSAMEYANDQLKAIAE

KAA0034843.1 retrotransposon protein [Cucumis melo var. makuwa]2.1e-8341.56Show/hide
Query:  MAMFLHVLAHDMKNRVIQREFLRSGETISRYFNLVLLTVLRLSDELLAKPQRVTNGCTDARW-------------------------------NEVVRGT
        +AMFLH+LAHD+KNRVIQREF+RSGETISR+FN+VLL V+RL DELL KPQ V N CTD RW                                EV    
Subjt:  MAMFLHVLAHDMKNRVIQREFLRSGETISRYFNLVLLTVLRLSDELLAKPQRVTNGCTDARW-------------------------------NEVVRGT

Query:  I------------------SMATVRI--------------------------------------------------------------------------
        +                  S A  RI                                                                          
Subjt:  I------------------SMATVRI--------------------------------------------------------------------------

Query:  --------------------------------------------------MATSSRALKHHWTKEEDTTLVECLVELVSAGGWRSNNGTFRPGYHSHLQK
                                                          M +SSR  KH WTKEE+      LVELV+AGGWRS+NGTFRPGY + L +
Subjt:  --------------------------------------------------MATSSRALKHHWTKEEDTTLVECLVELVSAGGWRSNNGTFRPGYHSHLQK

Query:  MMAERMPGHNITASTIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCIIAEKDLYDNWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFAD
        MMA ++PG NI ASTID RIK MKR F A++EMRGP CSGFGWNDE KCI+AEK+++D+W  SHPAAKGLLNK F HYD+L YVFG+DRATGGRA++FAD
Subjt:  MMAERMPGHNITASTIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCIIAEKDLYDNWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFAD

Query:  VGSNVLAEYDGFLAYDGNDVEFPTMYSQGLDMSPDDIMGTRPTRLSEGR---AGSKRKRGRQAFEVAEIIRSAMEYANDQLKAIAE
        +GSN    YD F A    D +F  MYS GL+MSPDD+M TR  R+SE R   +GSKRKR   A +  +I+R+A+EY N+QL  IAE
Subjt:  VGSNVLAEYDGFLAYDGNDVEFPTMYSQGLDMSPDDIMGTRPTRLSEGR---AGSKRKRGRQAFEVAEIIRSAMEYANDQLKAIAE

KAA0066208.1 retrotransposon protein [Cucumis melo var. makuwa]3.1e-8265.55Show/hide
Query:  MATSSRALKHHWTKEEDTTLVECLVELVSAGGWRSNNGTFRPGYHSHLQKMMAERMPGHNITAST-IDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKC
        M+TS+RA +H WT+EE+ TLVECL+ELVS GGW+S+NGTFRPGY + L +MMAE++PG  + A+T IDCRIKT+KR FQAI+EMRGP CSGFGWNDE KC
Subjt:  MATSSRALKHHWTKEEDTTLVECLVELVSAGGWRSNNGTFRPGYHSHLQKMMAERMPGHNITAST-IDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKC

Query:  IIAEKDLYDNWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFADVGSNVL-AEYDGFLAYDGNDVEFPTMYSQGLDMSPDDIMGTRPTRLSEG
        IIAEK+L+DNWV+SHPAAKGLLNKPFP+YD+L YVFGRDRATG  A+TFADVGSN     YD F   DGN+ +FP +YSQG+D+S DD+  +RP+R SEG
Subjt:  IIAEKDLYDNWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFADVGSNVL-AEYDGFLAYDGNDVEFPTMYSQGLDMSPDDIMGTRPTRLSEG

Query:  R---AGSKRKRGRQAFEVAEIIRSAMEYANDQLKAIAE
        R   +GSKRKRG Q     E I  A++  N+QL+ IAE
Subjt:  R---AGSKRKRGRQAFEVAEIIRSAMEYANDQLKAIAE

TYK05082.1 retrotransposon protein [Cucumis melo var. makuwa]6.2e-8365.68Show/hide
Query:  MATSSRALKHHWTKEEDTTLVECLVELVSAGGWRSNNGTFRPGYHSHLQKMMAERMPGHNITASTIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCI
        MA+SSR  KH WTKEE+ +LVECLVELV+AGGWRS+NGTFRPGY + L +MMA ++PG NI ASTID RIK MKR F A++EMRGP CSGFGWNDE KCI
Subjt:  MATSSRALKHHWTKEEDTTLVECLVELVSAGGWRSNNGTFRPGYHSHLQKMMAERMPGHNITASTIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCI

Query:  IAEKDLYDNWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFADVGSNVLAEYDGFLAYDGNDVEFPTMYSQGLDMSPDDIMGTRPTRLSEGR-
        + EK+L+D+WVKSHPAAKGLLNK F HYD+L YVFG+DRATGGRA++FAD+GSN    YD   A    D +FP MYS GL+MSPDD+M TR  R+SE R 
Subjt:  IAEKDLYDNWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFADVGSNVLAEYDGFLAYDGNDVEFPTMYSQGLDMSPDDIMGTRPTRLSEGR-

Query:  --AGSKRKRGRQAFEVAEIIRSAMEYANDQLKAIAE
          +GSKRKR   A +  +I+R+A+EY N+QL  IAE
Subjt:  --AGSKRKRGRQAFEVAEIIRSAMEYANDQLKAIAE

TrEMBL top hitse value%identityAlignment
A0A5A7SWD8 Retrotransposon protein1.0e-8341.56Show/hide
Query:  MAMFLHVLAHDMKNRVIQREFLRSGETISRYFNLVLLTVLRLSDELLAKPQRVTNGCTDARW-------------------------------NEVVRGT
        +AMFLH+LAHD+KNRVIQREF+RSGETISR+FN+VLL V+RL DELL KPQ V N CTD RW                                EV    
Subjt:  MAMFLHVLAHDMKNRVIQREFLRSGETISRYFNLVLLTVLRLSDELLAKPQRVTNGCTDARW-------------------------------NEVVRGT

Query:  I------------------SMATVRI--------------------------------------------------------------------------
        +                  S A  RI                                                                          
Subjt:  I------------------SMATVRI--------------------------------------------------------------------------

Query:  --------------------------------------------------MATSSRALKHHWTKEEDTTLVECLVELVSAGGWRSNNGTFRPGYHSHLQK
                                                          M +SSR  KH WTKEE+      LVELV+AGGWRS+NGTFRPGY + L +
Subjt:  --------------------------------------------------MATSSRALKHHWTKEEDTTLVECLVELVSAGGWRSNNGTFRPGYHSHLQK

Query:  MMAERMPGHNITASTIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCIIAEKDLYDNWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFAD
        MMA ++PG NI ASTID RIK MKR F A++EMRGP CSGFGWNDE KCI+AEK+++D+W  SHPAAKGLLNK F HYD+L YVFG+DRATGGRA++FAD
Subjt:  MMAERMPGHNITASTIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCIIAEKDLYDNWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFAD

Query:  VGSNVLAEYDGFLAYDGNDVEFPTMYSQGLDMSPDDIMGTRPTRLSEGR---AGSKRKRGRQAFEVAEIIRSAMEYANDQLKAIAE
        +GSN    YD F A    D +F  MYS GL+MSPDD+M TR  R+SE R   +GSKRKR   A +  +I+R+A+EY N+QL  IAE
Subjt:  VGSNVLAEYDGFLAYDGNDVEFPTMYSQGLDMSPDDIMGTRPTRLSEGR---AGSKRKRGRQAFEVAEIIRSAMEYANDQLKAIAE

A0A5A7TRV1 Retrotransposon protein2.5e-8265.13Show/hide
Query:  MATSSRALKHHWTKEEDTTLVECLVELVSAGGWRSNNGTFRPGYHSHLQKMMAERMPGHNITAST-IDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKC
        M+TS+RA +H WT+EE+ TLVECL+ELVS GGW+S+NGTFRPGY + L +MMAE++PG  + A+T IDCRIKT+KR FQAI+EMRGP CSGFGWNDE KC
Subjt:  MATSSRALKHHWTKEEDTTLVECLVELVSAGGWRSNNGTFRPGYHSHLQKMMAERMPGHNITAST-IDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKC

Query:  IIAEKDLYDNWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFADVGSNVL-AEYDGFLAYDGNDVEFPTMYSQGLDMSPDDIMGTRPTRLSEG
        I+AEK+L+DNWV+SHPAAKGLLNKPFP+YD+L YVFGRDRATG  A+TFADVGSN     YD F   DGN+ +FP +YSQG+D+S DD+  +RP+R SEG
Subjt:  IIAEKDLYDNWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFADVGSNVL-AEYDGFLAYDGNDVEFPTMYSQGLDMSPDDIMGTRPTRLSEG

Query:  R---AGSKRKRGRQAFEVAEIIRSAMEYANDQLKAIAE
        R   +GSKRKRG Q     E I  A++  N+QL+ IAE
Subjt:  R---AGSKRKRGRQAFEVAEIIRSAMEYANDQLKAIAE

A0A5A7VES2 Retrotransposon protein1.5e-8265.55Show/hide
Query:  MATSSRALKHHWTKEEDTTLVECLVELVSAGGWRSNNGTFRPGYHSHLQKMMAERMPGHNITAST-IDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKC
        M+TS+RA +H WT+EE+ TLVECL+ELVS GGW+S+NGTFRPGY + L +MMAE++PG  + A+T IDCRIKT+KR FQAI+EMRGP CSGFGWNDE KC
Subjt:  MATSSRALKHHWTKEEDTTLVECLVELVSAGGWRSNNGTFRPGYHSHLQKMMAERMPGHNITAST-IDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKC

Query:  IIAEKDLYDNWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFADVGSNVL-AEYDGFLAYDGNDVEFPTMYSQGLDMSPDDIMGTRPTRLSEG
        IIAEK+L+DNWV+SHPAAKGLLNKPFP+YD+L YVFGRDRATG  A+TFADVGSN     YD F   DGN+ +FP +YSQG+D+S DD+  +RP+R SEG
Subjt:  IIAEKDLYDNWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFADVGSNVL-AEYDGFLAYDGNDVEFPTMYSQGLDMSPDDIMGTRPTRLSEG

Query:  R---AGSKRKRGRQAFEVAEIIRSAMEYANDQLKAIAE
        R   +GSKRKRG Q     E I  A++  N+QL+ IAE
Subjt:  R---AGSKRKRGRQAFEVAEIIRSAMEYANDQLKAIAE

A0A5D3C1M0 Retrotransposon protein3.0e-8365.68Show/hide
Query:  MATSSRALKHHWTKEEDTTLVECLVELVSAGGWRSNNGTFRPGYHSHLQKMMAERMPGHNITASTIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCI
        MA+SSR  KH WTKEE+ +LVECLVELV+AGGWRS+NGTFRPGY + L +MMA ++PG NI ASTID RIK MKR F A++EMRGP CSGFGWNDE KCI
Subjt:  MATSSRALKHHWTKEEDTTLVECLVELVSAGGWRSNNGTFRPGYHSHLQKMMAERMPGHNITASTIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCI

Query:  IAEKDLYDNWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFADVGSNVLAEYDGFLAYDGNDVEFPTMYSQGLDMSPDDIMGTRPTRLSEGR-
        + EK+L+D+WVKSHPAAKGLLNK F HYD+L YVFG+DRATGGRA++FAD+GSN    YD   A    D +FP MYS GL+MSPDD+M TR  R+SE R 
Subjt:  IAEKDLYDNWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFADVGSNVLAEYDGFLAYDGNDVEFPTMYSQGLDMSPDDIMGTRPTRLSEGR-

Query:  --AGSKRKRGRQAFEVAEIIRSAMEYANDQLKAIAE
          +GSKRKR   A +  +I+R+A+EY N+QL  IAE
Subjt:  --AGSKRKRGRQAFEVAEIIRSAMEYANDQLKAIAE

E5GCB5 Retrotransposon protein1.3e-8338.92Show/hide
Query:  MAMFLHVLAHDMKNRVIQREFLRSGETISRYFNLVLLTVLRLSDELLAKPQRVTNGCTDARW--------------------------------------
        +AMFLH+LAHD+K+RVI+REF+RSGETISR+FN+VLL V+RL +ELL KPQ V N CTD RW                                      
Subjt:  MAMFLHVLAHDMKNRVIQREFLRSGETISRYFNLVLLTVLRLSDELLAKPQRVTNGCTDARW--------------------------------------

Query:  -----------------------NEVVRGTIS-------------------------MATVR--------------------------------------
                               + ++R  +S                         +A  R                                      
Subjt:  -----------------------NEVVRGTIS-------------------------MATVR--------------------------------------

Query:  ----------------------------------------------------------------------------------IMATSSRALKHHWTKEED
                                                                                          IM +SSR  KH WTKEE+
Subjt:  ----------------------------------------------------------------------------------IMATSSRALKHHWTKEED

Query:  TTLVECLVELVSAGGWRSNNGTFRPGYHSHLQKMMAERMPGHNITASTIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCIIAEKDLYDNWVKSHPAA
          LVECLVELV+AGGWRS+NGTFRPGY + L +MMA ++PG NI ASTID RIK MKR F A++EMRGP CSGFGWNDE KCI+AEK+++D+W  SHPAA
Subjt:  TTLVECLVELVSAGGWRSNNGTFRPGYHSHLQKMMAERMPGHNITASTIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCIIAEKDLYDNWVKSHPAA

Query:  KGLLNKPFPHYDDLCYVFGRDRATGGRAKTFADVGSNVLAEYDGFLAYDGNDVEFPTMYSQGLDMSPDDIMGTRPTRLSEGR---AGSKRKRGRQAFEVA
        KGLLNK F HYD+L YVFG+DRATGGRA++FAD+GSN    YD   A    D +FP MYS GL+MSPDD+M TR  R+SE R   +GSKRKR   A +  
Subjt:  KGLLNKPFPHYDDLCYVFGRDRATGGRAKTFADVGSNVLAEYDGFLAYDGNDVEFPTMYSQGLDMSPDDIMGTRPTRLSEGR---AGSKRKRGRQAFEVA

Query:  EIIRSAMEYANDQLKAIAE
        +I+R+A+EY N+QL  IAE
Subjt:  EIIRSAMEYANDQLKAIAE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30140.1 unknown protein2.3e-1127.46Show/hide
Query:  HHWTKEEDTTLVECLVELVSAGGWRSNNGTF-RPGYHSHLQKMMAERMPGHNITASTIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCIIAEKDLYD
        + WT +E   L+E + +      WR ++G   +    S L   + +R+ G N        R+K +K  +Q+  +++    SGFGW+ E K   A  +++ 
Subjt:  HHWTKEEDTTLVECLVELVSAGGWRSNNGTF-RPGYHSHLQKMMAERMPGHNITASTIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCIIAEKDLYD

Query:  NWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFAD
        +++K+HP  K +  +   H++DL  +FG   ATG  A   +D
Subjt:  NWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFAD

AT2G24960.2 unknown protein8.8e-1125.95Show/hide
Query:  WTKEEDTTLVECLVELVSAGGWRSNNGTFRPGYHSHLQKMMAERMPGHNITASTIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCIIAEKDLYDNWV
        WT   D  L++ LVE V+ G  R         ++  +    A+    HN     +  R K ++R +  I  +     +GF W+     +IA+ D+++ ++
Subjt:  WTKEEDTTLVECLVELVSAGGWRSNNGTFRPGYHSHLQKMMAERMPGHNITASTIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCIIAEKDLYDNWV

Query:  KSHPAAKGLLNKPFPHYDDLCYVFGRDRATG
        ++HP A+    K  P Y +LC++FG++ + G
Subjt:  KSHPAAKGLLNKPFPHYDDLCYVFGRDRATG

AT4G02210.1 unknown protein3.3e-1023.6Show/hide
Query:  LKHHWTKEEDTTLVECLVELVSAGGWRSNNGTFRPGYHSHLQKMMAERMPGHNITA--------STIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKC
        L+  WT E D   +E +VE V  G            +  HL    A +    + TA          +  R KT++  F++++ +   +  GF W+D  + 
Subjt:  LKHHWTKEEDTTLVECLVELVSAGGWRSNNGTFRPGYHSHLQKMMAERMPGHNITA--------STIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKC

Query:  IIAEKDLYDNWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFADVGSNVLAEYD
        ++A+  ++D ++K HP ++    K  P Y DLC V+    +     ++ ++  S  L + D
Subjt:  IIAEKDLYDNWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFADVGSNVLAEYD

AT4G02210.2 unknown protein3.3e-1023.6Show/hide
Query:  LKHHWTKEEDTTLVECLVELVSAGGWRSNNGTFRPGYHSHLQKMMAERMPGHNITA--------STIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKC
        L+  WT E D   +E +VE V  G            +  HL    A +    + TA          +  R KT++  F++++ +   +  GF W+D  + 
Subjt:  LKHHWTKEEDTTLVECLVELVSAGGWRSNNGTFRPGYHSHLQKMMAERMPGHNITA--------STIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKC

Query:  IIAEKDLYDNWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFADVGSNVLAEYD
        ++A+  ++D ++K HP ++    K  P Y DLC V+    +     ++ ++  S  L + D
Subjt:  IIAEKDLYDNWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFADVGSNVLAEYD

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)1.2e-0444.44Show/hide
Query:  MAMFLHVLAHDMKNRVIQREFLRSGETISRYFNLVLLTVLRLSDE
        +A+FL ++ H+++ R +Q  F  SGETISR+FN VL  V+ +S +
Subjt:  MAMFLHVLAHDMKNRVIQREFLRSGETISRYFNLVLLTVLRLSDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATGTTCCTTCACGTACTTGCGCACGACATGAAAAATCGTGTCATTCAACGTGAGTTCCTACGATCTGGTGAGACAATTTCACGATATTTCAACCTGGTACTACT
GACTGTTTTACGGCTTTCTGACGAGTTGTTGGCGAAACCACAACGAGTGACGAACGGGTGCACAGATGCACGATGGAATGAGGTGGTTCGAGGTACGATTTCAATGGCCA
CAGTCCGAATTATGGCAACTTCTTCAAGGGCCCTAAAGCACCACTGGACGAAAGAGGAGGATACCACCCTCGTTGAATGTCTTGTGGAATTGGTATCAGCCGGCGGGTGG
AGGTCGAACAACGGGACGTTTAGACCCGGTTATCATAGTCATCTGCAGAAAATGATGGCCGAGAGGATGCCGGGACATAACATAACGGCTTCGACCATAGATTGTCGAAT
AAAGACTATGAAAAGAGCGTTTCAAGCCATATCTGAAATGAGGGGCCCGATGTGCAGTGGGTTCGGTTGGAATGATGAGCTGAAATGCATTATTGCCGAGAAAGACTTGT
ACGACAATTGGGTGAAGAGTCATCCAGCAGCGAAGGGCCTCCTAAACAAACCTTTTCCCCATTACGACGACCTTTGCTACGTCTTTGGAAGAGATCGTGCAACAGGAGGT
CGTGCTAAAACCTTTGCCGATGTTGGATCAAACGTGCTTGCAGAGTACGATGGATTTCTCGCTTATGACGGGAACGATGTGGAGTTCCCTACAATGTACAGTCAGGGACT
GGACATGTCACCTGACGACATAATGGGCACACGACCCACTCGGTTGTCTGAGGGAAGGGCGGGTTCGAAGAGGAAACGGGGAAGGCAGGCGTTCGAGGTGGCAGAAATTA
TTCGCAGTGCCATGGAATATGCGAACGACCAGCTGAAGGCCATTGCAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATGTTCCTTCACGTACTTGCGCACGACATGAAAAATCGTGTCATTCAACGTGAGTTCCTACGATCTGGTGAGACAATTTCACGATATTTCAACCTGGTACTACT
GACTGTTTTACGGCTTTCTGACGAGTTGTTGGCGAAACCACAACGAGTGACGAACGGGTGCACAGATGCACGATGGAATGAGGTGGTTCGAGGTACGATTTCAATGGCCA
CAGTCCGAATTATGGCAACTTCTTCAAGGGCCCTAAAGCACCACTGGACGAAAGAGGAGGATACCACCCTCGTTGAATGTCTTGTGGAATTGGTATCAGCCGGCGGGTGG
AGGTCGAACAACGGGACGTTTAGACCCGGTTATCATAGTCATCTGCAGAAAATGATGGCCGAGAGGATGCCGGGACATAACATAACGGCTTCGACCATAGATTGTCGAAT
AAAGACTATGAAAAGAGCGTTTCAAGCCATATCTGAAATGAGGGGCCCGATGTGCAGTGGGTTCGGTTGGAATGATGAGCTGAAATGCATTATTGCCGAGAAAGACTTGT
ACGACAATTGGGTGAAGAGTCATCCAGCAGCGAAGGGCCTCCTAAACAAACCTTTTCCCCATTACGACGACCTTTGCTACGTCTTTGGAAGAGATCGTGCAACAGGAGGT
CGTGCTAAAACCTTTGCCGATGTTGGATCAAACGTGCTTGCAGAGTACGATGGATTTCTCGCTTATGACGGGAACGATGTGGAGTTCCCTACAATGTACAGTCAGGGACT
GGACATGTCACCTGACGACATAATGGGCACACGACCCACTCGGTTGTCTGAGGGAAGGGCGGGTTCGAAGAGGAAACGGGGAAGGCAGGCGTTCGAGGTGGCAGAAATTA
TTCGCAGTGCCATGGAATATGCGAACGACCAGCTGAAGGCCATTGCAGAATGA
Protein sequenceShow/hide protein sequence
MAMFLHVLAHDMKNRVIQREFLRSGETISRYFNLVLLTVLRLSDELLAKPQRVTNGCTDARWNEVVRGTISMATVRIMATSSRALKHHWTKEEDTTLVECLVELVSAGGW
RSNNGTFRPGYHSHLQKMMAERMPGHNITASTIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCIIAEKDLYDNWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGG
RAKTFADVGSNVLAEYDGFLAYDGNDVEFPTMYSQGLDMSPDDIMGTRPTRLSEGRAGSKRKRGRQAFEVAEIIRSAMEYANDQLKAIAE