| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0042324.1 Retrovirus-related Pol polyprotein from transposon 297 family [Cucumis melo var. makuwa] | 1.9e-100 | 64.42 | Show/hide |
Query: NEFARTSPNILLG--RPFLKTAKAIINVDKGLVSVEFEGDVVFFNIFDDVKSSNGH-----------------HDKFNELIDQATLEYVDDEFAKEKPSH
N + R PN+ G P + + +GL+SVEF+G+VV +IFDDVKSSN H HDKFNELIDQATLE+V++EFAK KPS
Subjt: NEFARTSPNILLG--RPFLKTAKAIINVDKGLVSVEFEGDVVFFNIFDDVKSSNGH-----------------HDKFNELIDQATLEYVDDEFAKEKPSH
Query: VDLSTFLDFVTSINDEHALVDNVTTFEHHALANNFATSNELDLGRDIKHDDEQILKTIGIGNVHNINTHIENLEKKN----DSCEVYLHKECEHSNSNEL
DLS FLDFVTS+NDE+ LVDN+ T E H N+F +SNE D GR+IK D E ILK+I I N H+ + HI+N EK+N D CEV LHKECE SN+NEL
Subjt: VDLSTFLDFVTSINDEHALVDNVTTFEHHALANNFATSNELDLGRDIKHDDEQILKTIGIGNVHNINTHIENLEKKN----DSCEVYLHKECEHSNSNEL
Query: TLPLQENRIELKVFPSHLKYMFLGEKNTYPVIISKKLTKEQKARLLETLKRHKQAIESKNKIQPQRRLNPTLKEVVKKEVLKLKDVGIIYPIPHSSWVSP
T PLQEN I+LKV PSHLKY+FLGEKNTY VIISK+LTKEQ+ARLLETLK H+QAI +KNKIQPQRR+NP LKE VKKEV KLKDVGIIYP+PHS+WVS
Subjt: TLPLQENRIELKVFPSHLKYMFLGEKNTYPVIISKKLTKEQKARLLETLKRHKQAIESKNKIQPQRRLNPTLKEVVKKEVLKLKDVGIIYPIPHSSWVSP
Query: IHVVPKKTGMTIVENSKGEFVPTRVS
I+VVPKKTGMTIVENS+G+FV TRVS
Subjt: IHVVPKKTGMTIVENSKGEFVPTRVS
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| KAA0053241.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa] | 1.4e-55 | 60.73 | Show/hide |
Query: NNFATSNELDLGRDIKHDDEQILKTIGIGNVHNINTHIENLEK----KNDSCEVYLHKECEHSNSNELTLPLQENRIELKVFPSHLKYMFLGEKNTYPVI
NNFA+SNE DLG+DIK DDEQILK+IGI N H+ +THIEN EK +NDSCEVYLHKECE+SNSN LTLPLQ+ IEL
Subjt: NNFATSNELDLGRDIKHDDEQILKTIGIGNVHNINTHIENLEK----KNDSCEVYLHKECEHSNSNELTLPLQENRIELKVFPSHLKYMFLGEKNTYPVI
Query: ISKKLTKEQKARLLETLKRHKQAI-----------------------ESKNKIQPQRRLNPTLKEVVKKEVLKLKDVGIIYPIPHSSWVSPIHVVPKKTG
K+L +E++ARLLETLKRH+QAI E+KN IQPQR NPTLKEV KKEVLKLKDVGIIY + HS+WVSPIHVVPKKT
Subjt: ISKKLTKEQKARLLETLKRHKQAI-----------------------ESKNKIQPQRRLNPTLKEVVKKEVLKLKDVGIIYPIPHSSWVSPIHVVPKKTG
Query: MTIVENSKGEFVPTRVSNS
MTI+ENS+GEFVPT VSNS
Subjt: MTIVENSKGEFVPTRVSNS
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| KAA0065429.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa] | 5.6e-76 | 56.58 | Show/hide |
Query: MNNEFARTSPNILLGRPFLKTAKAIINVDKGLVSVEFEGDVVFFNIFDDVKSSNGHHDKFNELIDQATLEYVDDEFAKEKPSHVDLSTFLDFVTSINDEH
MN EFARTSP ILLGRPFLKTAKAIINVDKGL+SVEF+G+V+ FNIFD +VD+EFAKEKP+ DLS FL+FVTSINDEH
Subjt: MNNEFARTSPNILLGRPFLKTAKAIINVDKGLVSVEFEGDVVFFNIFDDVKSSNGHHDKFNELIDQATLEYVDDEFAKEKPSHVDLSTFLDFVTSINDEH
Query: ALVDNVTTFEHHALANNFATSNELDLGRDIKHDDEQILKTIGIGNVHNINTHIENLEK----KNDSCEVYLHKECEHSNSNELTLPLQENRIELKVFPSH
ALVDNVTT E HAL NNF +SNE DLGRDIK DDEQILK+I I N H+INTHI+N EK KNDSCE EN IELKV P H
Subjt: ALVDNVTTFEHHALANNFATSNELDLGRDIKHDDEQILKTIGIGNVHNINTHIENLEK----KNDSCEVYLHKECEHSNSNELTLPLQENRIELKVFPSH
Query: LKYMFLGEKNTYPVIISKKLTKEQKARLLETLKRHKQAIESKNKIQPQRRLNPTLKEVVKKEVLKLKDVGIIYPIPHSSWVSPIHVVPKKTGMTIVENSK
LKY+FLGEKNTY V+ + + L++ + + + NPTLKEVVKKEVLKLKD+GIIY + H++W++PIHVV KK MTIV+NS+
Subjt: LKYMFLGEKNTYPVIISKKLTKEQKARLLETLKRHKQAIESKNKIQPQRRLNPTLKEVVKKEVLKLKDVGIIYPIPHSSWVSPIHVVPKKTGMTIVENSK
Query: GEFV
+ +
Subjt: GEFV
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| KAA0066992.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa] | 6.8e-66 | 51.58 | Show/hide |
Query: LKTAKAIINVDKGLVSVEFEGDVVFFNIFDDVKSSNGH-----------------HDKFNELIDQATLEYVDDEFAKEKPSHVDLSTFLDFVTSINDEHA
L AI ++ + L+SVEF+ DVV FNIF DVKSSN H HD FNELIDQATLEYV++EFAK KPS DLS FL FV S+NDEH
Subjt: LKTAKAIINVDKGLVSVEFEGDVVFFNIFDDVKSSNGH-----------------HDKFNELIDQATLEYVDDEFAKEKPSHVDLSTFLDFVTSINDEHA
Query: LVDNVTTFEHHALANNFATSNELDLGRDIKHDDEQILKTIGIGNVHNINTHIENLEKKNDSCEVYLHKECEHSNSNELTLPLQENRIELKVFPSHLKYMF
VDN+ T E HAL N+F +SNE DLGR+IK D+ I+K +LKV PSHLKY F
Subjt: LVDNVTTFEHHALANNFATSNELDLGRDIKHDDEQILKTIGIGNVHNINTHIENLEKKNDSCEVYLHKECEHSNSNELTLPLQENRIELKVFPSHLKYMF
Query: LGEKNTYPVIISKKLTKEQKARLLETLKRHKQAI-----------------------ESKNKIQPQRRLNPTLKEVVKKEVLKLKDVGIIYPIPHSSWVS
L EKNTYPVII K+LTKEQ+ARL ETLKR++QA +KNKIQ QRRLNPTLKEVVKKEVLKLKDVGIIY +PHS+WVS
Subjt: LGEKNTYPVIISKKLTKEQKARLLETLKRHKQAI-----------------------ESKNKIQPQRRLNPTLKEVVKKEVLKLKDVGIIYPIPHSSWVS
Query: PIHVVPKKTGMTIVEN
IHVVPKK +TIVEN
Subjt: PIHVVPKKTGMTIVEN
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| KAE8647060.1 hypothetical protein Csa_022980 [Cucumis sativus] | 3.7e-104 | 66.77 | Show/hide |
Query: MNNEFARTSPNILLGRPFLKTAKAIINVDKGLVSVEFEGDVVFFNIFDDVKSSNGH-----------------HDKFNELIDQATLEYVDDEFAKEKPSH
MN+EFARTSP ILLGRP LKTAKA+INVDKGL+SVEF+GDVV FNIFDD+KSSN H DK NELIDQATLEYVD+EF+KEKPS
Subjt: MNNEFARTSPNILLGRPFLKTAKAIINVDKGLVSVEFEGDVVFFNIFDDVKSSNGH-----------------HDKFNELIDQATLEYVDDEFAKEKPSH
Query: VDLSTFLDFVTSINDEHALVDNVTTFEHHALANNFATSNELDLGRDIKHDDEQILKTIGIGNVHNINTHIENLEKK-----NDSCEVYLHKECE----HS
DLS FL+FV SINDEHALVDNVTT + HAL NNFA+S ELDLGRDIK +DEQ LK I I N + + HI L+KK ND CEVYLHKECE +S
Subjt: VDLSTFLDFVTSINDEHALVDNVTTFEHHALANNFATSNELDLGRDIKHDDEQILKTIGIGNVHNINTHIENLEKK-----NDSCEVYLHKECE----HS
Query: NSNELTLPLQENRIELKVFPSHLKYMFLGEKNTYPVIISKKLTKEQKARLLETLKRHKQAI-----------------------ESKNKIQPQRRLNPTL
NSNELTLPLQ+N IE+KV PSHLKY+FLGEKNTYP IISK+LT+EQ+ARLLETLKRHKQAI +KNK+QPQR LNPTL
Subjt: NSNELTLPLQENRIELKVFPSHLKYMFLGEKNTYPVIISKKLTKEQKARLLETLKRHKQAI-----------------------ESKNKIQPQRRLNPTL
Query: KEVVKKEVLKLKDVGIIYPIPHSSW
KEVVKKEVLKLK IIYP+PHS+W
Subjt: KEVVKKEVLKLKDVGIIYPIPHSSW
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7UI66 Transposon Ty3-I Gag-Pol polyprotein | 6.9e-56 | 60.73 | Show/hide |
Query: NNFATSNELDLGRDIKHDDEQILKTIGIGNVHNINTHIENLEK----KNDSCEVYLHKECEHSNSNELTLPLQENRIELKVFPSHLKYMFLGEKNTYPVI
NNFA+SNE DLG+DIK DDEQILK+IGI N H+ +THIEN EK +NDSCEVYLHKECE+SNSN LTLPLQ+ IEL
Subjt: NNFATSNELDLGRDIKHDDEQILKTIGIGNVHNINTHIENLEK----KNDSCEVYLHKECEHSNSNELTLPLQENRIELKVFPSHLKYMFLGEKNTYPVI
Query: ISKKLTKEQKARLLETLKRHKQAI-----------------------ESKNKIQPQRRLNPTLKEVVKKEVLKLKDVGIIYPIPHSSWVSPIHVVPKKTG
K+L +E++ARLLETLKRH+QAI E+KN IQPQR NPTLKEV KKEVLKLKDVGIIY + HS+WVSPIHVVPKKT
Subjt: ISKKLTKEQKARLLETLKRHKQAI-----------------------ESKNKIQPQRRLNPTLKEVVKKEVLKLKDVGIIYPIPHSSWVSPIHVVPKKTG
Query: MTIVENSKGEFVPTRVSNS
MTI+ENS+GEFVPT VSNS
Subjt: MTIVENSKGEFVPTRVSNS
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| A0A5A7VIZ2 Retrovirus-related Pol polyprotein from transposon 17.6 | 2.7e-76 | 56.58 | Show/hide |
Query: MNNEFARTSPNILLGRPFLKTAKAIINVDKGLVSVEFEGDVVFFNIFDDVKSSNGHHDKFNELIDQATLEYVDDEFAKEKPSHVDLSTFLDFVTSINDEH
MN EFARTSP ILLGRPFLKTAKAIINVDKGL+SVEF+G+V+ FNIFD +VD+EFAKEKP+ DLS FL+FVTSINDEH
Subjt: MNNEFARTSPNILLGRPFLKTAKAIINVDKGLVSVEFEGDVVFFNIFDDVKSSNGHHDKFNELIDQATLEYVDDEFAKEKPSHVDLSTFLDFVTSINDEH
Query: ALVDNVTTFEHHALANNFATSNELDLGRDIKHDDEQILKTIGIGNVHNINTHIENLEK----KNDSCEVYLHKECEHSNSNELTLPLQENRIELKVFPSH
ALVDNVTT E HAL NNF +SNE DLGRDIK DDEQILK+I I N H+INTHI+N EK KNDSCE EN IELKV P H
Subjt: ALVDNVTTFEHHALANNFATSNELDLGRDIKHDDEQILKTIGIGNVHNINTHIENLEK----KNDSCEVYLHKECEHSNSNELTLPLQENRIELKVFPSH
Query: LKYMFLGEKNTYPVIISKKLTKEQKARLLETLKRHKQAIESKNKIQPQRRLNPTLKEVVKKEVLKLKDVGIIYPIPHSSWVSPIHVVPKKTGMTIVENSK
LKY+FLGEKNTY V+ + + L++ + + + NPTLKEVVKKEVLKLKD+GIIY + H++W++PIHVV KK MTIV+NS+
Subjt: LKYMFLGEKNTYPVIISKKLTKEQKARLLETLKRHKQAIESKNKIQPQRRLNPTLKEVVKKEVLKLKDVGIIYPIPHSSWVSPIHVVPKKTGMTIVENSK
Query: GEFV
+ +
Subjt: GEFV
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| A0A5D3BDS0 Transposon Ty3-I Gag-Pol polyprotein | 3.3e-66 | 51.58 | Show/hide |
Query: LKTAKAIINVDKGLVSVEFEGDVVFFNIFDDVKSSNGH-----------------HDKFNELIDQATLEYVDDEFAKEKPSHVDLSTFLDFVTSINDEHA
L AI ++ + L+SVEF+ DVV FNIF DVKSSN H HD FNELIDQATLEYV++EFAK KPS DLS FL FV S+NDEH
Subjt: LKTAKAIINVDKGLVSVEFEGDVVFFNIFDDVKSSNGH-----------------HDKFNELIDQATLEYVDDEFAKEKPSHVDLSTFLDFVTSINDEHA
Query: LVDNVTTFEHHALANNFATSNELDLGRDIKHDDEQILKTIGIGNVHNINTHIENLEKKNDSCEVYLHKECEHSNSNELTLPLQENRIELKVFPSHLKYMF
VDN+ T E HAL N+F +SNE DLGR+IK D+ I+K +LKV PSHLKY F
Subjt: LVDNVTTFEHHALANNFATSNELDLGRDIKHDDEQILKTIGIGNVHNINTHIENLEKKNDSCEVYLHKECEHSNSNELTLPLQENRIELKVFPSHLKYMF
Query: LGEKNTYPVIISKKLTKEQKARLLETLKRHKQAI-----------------------ESKNKIQPQRRLNPTLKEVVKKEVLKLKDVGIIYPIPHSSWVS
L EKNTYPVII K+LTKEQ+ARL ETLKR++QA +KNKIQ QRRLNPTLKEVVKKEVLKLKDVGIIY +PHS+WVS
Subjt: LGEKNTYPVIISKKLTKEQKARLLETLKRHKQAI-----------------------ESKNKIQPQRRLNPTLKEVVKKEVLKLKDVGIIYPIPHSSWVS
Query: PIHVVPKKTGMTIVEN
IHVVPKK +TIVEN
Subjt: PIHVVPKKTGMTIVEN
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| A0A5D3CSW0 Retrovirus-related Pol polyprotein from transposon 297 family | 1.0e-43 | 45.45 | Show/hide |
Query: MNNEFARTSPNILLGRPFLKTAKAIINVDKGLVSVEFEGDVVFFNIFDDVKSSNGH-----------------HDKFNELIDQATLEYVDDEFAKEKPSH
MNNEFART P ILLGRPFLKTAKAIINVDKGL+SVEF G+VV F DVKSSN H HDKFNELIDQATLEYVD+EFAKEKPS
Subjt: MNNEFARTSPNILLGRPFLKTAKAIINVDKGLVSVEFEGDVVFFNIFDDVKSSNGH-----------------HDKFNELIDQATLEYVDDEFAKEKPSH
Query: VDLSTFLDFVTSINDEHALVDNVTTFEHHALANNFATSNELDLGRDIKHDDEQILKTIGIGNVHNINTHIENLEKKNDSCEVYLHKECEHSNSNELTLPL
DLS FLDF+TSINDEHAL
Subjt: VDLSTFLDFVTSINDEHALVDNVTTFEHHALANNFATSNELDLGRDIKHDDEQILKTIGIGNVHNINTHIENLEKKNDSCEVYLHKECEHSNSNELTLPL
Query: QENRIELKVFPSHLKYMFLGEKNTYPVIISKKLTKEQKARLLETLKRHKQAI-----------------------ESKNKIQPQRR
EN I+LKV PSHL+Y+FL EKNTY VI K+L +EQ+ARLL+TLKRH+QAI +KNK+QPQRR
Subjt: QENRIELKVFPSHLKYMFLGEKNTYPVIISKKLTKEQKARLLETLKRHKQAI-----------------------ESKNKIQPQRR
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| A0A5D3CW21 Retrovirus-related Pol polyprotein from transposon 297 family | 9.2e-101 | 64.42 | Show/hide |
Query: NEFARTSPNILLG--RPFLKTAKAIINVDKGLVSVEFEGDVVFFNIFDDVKSSNGH-----------------HDKFNELIDQATLEYVDDEFAKEKPSH
N + R PN+ G P + + +GL+SVEF+G+VV +IFDDVKSSN H HDKFNELIDQATLE+V++EFAK KPS
Subjt: NEFARTSPNILLG--RPFLKTAKAIINVDKGLVSVEFEGDVVFFNIFDDVKSSNGH-----------------HDKFNELIDQATLEYVDDEFAKEKPSH
Query: VDLSTFLDFVTSINDEHALVDNVTTFEHHALANNFATSNELDLGRDIKHDDEQILKTIGIGNVHNINTHIENLEKKN----DSCEVYLHKECEHSNSNEL
DLS FLDFVTS+NDE+ LVDN+ T E H N+F +SNE D GR+IK D E ILK+I I N H+ + HI+N EK+N D CEV LHKECE SN+NEL
Subjt: VDLSTFLDFVTSINDEHALVDNVTTFEHHALANNFATSNELDLGRDIKHDDEQILKTIGIGNVHNINTHIENLEKKN----DSCEVYLHKECEHSNSNEL
Query: TLPLQENRIELKVFPSHLKYMFLGEKNTYPVIISKKLTKEQKARLLETLKRHKQAIESKNKIQPQRRLNPTLKEVVKKEVLKLKDVGIIYPIPHSSWVSP
T PLQEN I+LKV PSHLKY+FLGEKNTY VIISK+LTKEQ+ARLLETLK H+QAI +KNKIQPQRR+NP LKE VKKEV KLKDVGIIYP+PHS+WVS
Subjt: TLPLQENRIELKVFPSHLKYMFLGEKNTYPVIISKKLTKEQKARLLETLKRHKQAIESKNKIQPQRRLNPTLKEVVKKEVLKLKDVGIIYPIPHSSWVSP
Query: IHVVPKKTGMTIVENSKGEFVPTRVS
I+VVPKKTGMTIVENS+G+FV TRVS
Subjt: IHVVPKKTGMTIVENSKGEFVPTRVS
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