; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0028760 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028760
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTATA-binding protein-associated factor 2N-like
Genome locationchr07:1172309..1174170
RNA-Seq ExpressionPI0028760
SyntenyPI0028760
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001876 - Zinc finger, RanBP2-type
IPR036443 - Zinc finger, RanBP2-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN52873.1 hypothetical protein Csa_014917 [Cucumis sativus]3.2e-8297.95Show/hide
Query:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGVGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF
        MSRPGDWNCRSCQHLNFQRRDMCQRCG+PKSGGG+GRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF
Subjt:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGVGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF

Query:  AFASPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY
        AF SPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY
Subjt:  AFASPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY

XP_008454250.1 PREDICTED: uncharacterized RNA-binding protein C17H9.04c-like [Cucumis melo]1.6e-8197.95Show/hide
Query:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGVGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF
        MSRPGDWNCRSCQHLNFQRRDMCQRCG+PKSGGGVGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPR SPRGISPF
Subjt:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGVGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF

Query:  AFASPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY
        AFASPAR AASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY
Subjt:  AFASPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY

XP_022955940.1 uncharacterized RNA-binding protein C17H9.04c-like [Cucurbita moschata]3.8e-7589.04Show/hide
Query:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGVGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF
        M+RPGDWNC SC HLNFQRRD+CQRCGDPK+GGG  R GSGFG+GGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFD+PR +PRGISPF
Subjt:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGVGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF

Query:  AFASPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY
        AFA+PAR+ ASAWKSGDWICARSGCNEHNFASRMECFRC+APRDSY
Subjt:  AFASPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY

XP_022979604.1 ranBP2-type zinc finger protein At1g67325-like [Cucurbita maxima]2.7e-7387.67Show/hide
Query:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGVGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF
        M+RPGDWNC SC HLNFQRRD+CQRCGDPK+GGG GR GSGFG+GGSDVRPGDWYCS+GNCGAHNFASRSSCFKCGAFKDDMSAFDFD+PR +PRGISPF
Subjt:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGVGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF

Query:  AFASPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY
         F +PAR+ ASAWKSGDWICARSGCNEHNFASRMECFRC+APRDSY
Subjt:  AFASPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY

XP_038892097.1 zinc finger Ran-binding domain-containing protein 2-like [Benincasa hispida]3.2e-8298.63Show/hide
Query:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGVGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF
        MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGVGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPR SPRGISP+
Subjt:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGVGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF

Query:  AFASPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY
        AFASPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY
Subjt:  AFASPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY

TrEMBL top hitse value%identityAlignment
A0A0A0KTI0 Uncharacterized protein1.6e-8297.95Show/hide
Query:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGVGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF
        MSRPGDWNCRSCQHLNFQRRDMCQRCG+PKSGGG+GRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF
Subjt:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGVGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF

Query:  AFASPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY
        AF SPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY
Subjt:  AFASPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY

A0A1S3BZE4 uncharacterized RNA-binding protein C17H9.04c-like7.7e-8297.95Show/hide
Query:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGVGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF
        MSRPGDWNCRSCQHLNFQRRDMCQRCG+PKSGGGVGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPR SPRGISPF
Subjt:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGVGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF

Query:  AFASPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY
        AFASPAR AASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY
Subjt:  AFASPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY

A0A6J1GA82 periodic tryptophan protein 2 isoform X23.6e-7182.32Show/hide
Query:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGG----------GVGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSA----FD
        MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGG          G GRGGSGFGYGGSDVRPGDWYCS+GNCGAHNFASRSSCFKCGAFKDDMSA    FD
Subjt:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGG----------GVGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSA----FD

Query:  FDIPRRSPRGISPFAFASP----ARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY
        FD+PR   RG+SPF FA+P    ART ASAWKSGDWICARSGCNEHNFASRMECFRCSAP+DSY
Subjt:  FDIPRRSPRGISPFAFASP----ARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY

A0A6J1GWG9 uncharacterized RNA-binding protein C17H9.04c-like1.8e-7589.04Show/hide
Query:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGVGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF
        M+RPGDWNC SC HLNFQRRD+CQRCGDPK+GGG  R GSGFG+GGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFD+PR +PRGISPF
Subjt:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGVGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF

Query:  AFASPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY
        AFA+PAR+ ASAWKSGDWICARSGCNEHNFASRMECFRC+APRDSY
Subjt:  AFASPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY

A0A6J1IX27 ranBP2-type zinc finger protein At1g67325-like1.3e-7387.67Show/hide
Query:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGVGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF
        M+RPGDWNC SC HLNFQRRD+CQRCGDPK+GGG GR GSGFG+GGSDVRPGDWYCS+GNCGAHNFASRSSCFKCGAFKDDMSAFDFD+PR +PRGISPF
Subjt:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGVGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPF

Query:  AFASPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY
         F +PAR+ ASAWKSGDWICARSGCNEHNFASRMECFRC+APRDSY
Subjt:  AFASPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY

SwissProt top hitse value%identityAlignment
O13801 Uncharacterized RNA-binding protein C17H9.04c3.2e-0829.45Show/hide
Query:  RPGDWNCRSCQHLNFQRRDMCQRCGDP-----KSGGGVGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGI
        RPGDWNC  C   NFQRR  C RC  P      +  G       F YG           S GN  +H  A+    +       + +    D+  ++    
Subjt:  RPGDWNCRSCQHLNFQRRDMCQRCGDP-----KSGGGVGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGI

Query:  SPFAFASPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPR
             +S +      +++GDW C   GC  HNFA  + C RC A R
Subjt:  SPFAFASPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPR

Q27294 RNA-binding protein cabeza4.8e-0445.59Show/hide
Query:  RPGDWNCRSCQHLNFQRRDMCQRCGDPK-----SGGGVGRGGSGFGYGGSDVRPGDWYCSVGNCGAHN
        R GDW C SC + NF  R+ C RC  PK     S GG G GG G G GG     G+   S G  G HN
Subjt:  RPGDWNCRSCQHLNFQRRDMCQRCGDPK-----SGGGVGRGGSGFGYGGSDVRPGDWYCSVGNCGAHN

Arabidopsis top hitse value%identityAlignment
AT1G70650.1 Ran BP2/NZF zinc finger-like superfamily protein2.6e-0531.51Show/hide
Query:  RPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGVGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKC
        + GDW C++C  LNF +   C RC D  +                 + PG+W C   +C   NF   S C KC
Subjt:  RPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGVGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKC

AT2G17975.1 zinc finger (Ran-binding) family protein2.1e-0729.63Show/hide
Query:  RPGDWYCSVGNCGAHNFASRSSCFKCGAF------------------------------KDDMSAFDFDIPRRSPRGIS----PFAFASPARTAA-----
        R GDW C    CG HN++SR  C KC                                     SA     P  S   +S    P  F     T A     
Subjt:  RPGDWYCSVGNCGAHNFASRSSCFKCGAF------------------------------KDDMSAFDFDIPRRSPRGIS----PFAFASPARTAA-----

Query:  -SAWKSGDWICARSGCNEHNFASRMECFRCSAPRD
           W+ GDW+C  + C  HN+ASR EC RC   RD
Subjt:  -SAWKSGDWICARSGCNEHNFASRMECFRCSAPRD

AT2G26695.1 Ran BP2/NZF zinc finger-like superfamily protein4.7e-3143.57Show/hide
Query:  GDWNCRSCQHLNFQRRDMCQRCGDPKSGGGVGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPFAFAS
        GDW C +CQH NF++R+ CQ+CG PK G   G   S + Y  ++V  GDWYC   NCG+HN+ASR+SC++CG  K + +   +        G    A+ +
Subjt:  GDWNCRSCQHLNFQRRDMCQRCGDPKSGGGVGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPFAFAS

Query:  PARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRD
                WK+GDW+C R GC  HN+ASR ECF+C   RD
Subjt:  PARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRD

AT3G15680.1 Ran BP2/NZF zinc finger-like superfamily protein1.4e-5162.28Show/hide
Query:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSG-GGV---------GRGGSGFGY-GGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSA-----
        MSRPGDWNCRSC HLNFQRRD CQRCGD +SG GGV         GR  S FG+  GSDVRPGDWYC+VGNCG HNFASRS+CFKCG FKD+  A     
Subjt:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSG-GGV---------GRGGSGFGY-GGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSA-----

Query:  -------FDFDIPRRSPRGISPFAFASPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRD
               FD DI R             P     S+WKSGDWIC R GCNEHNFASRMECFRC+APRD
Subjt:  -------FDFDIPRRSPRGISPFAFASPARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRD

AT5G25490.1 Ran BP2/NZF zinc finger-like superfamily protein3.0e-4657.58Show/hide
Query:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGG-----GVGRGG----SGFGYG-GSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSA------
        M+RPGDWNCR C HLNFQRRD CQRC +P+ GG       G GG    S FG+  G DVRPGDWYC++G+CG HNFA+RSSCFKCGA KD+ S       
Subjt:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGG-----GVGRGG----SGFGYG-GSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSA------

Query:  ---FDFDIPRRSPRGISPFAFASP--ARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRD
            D ++  R  RG+  F  +S     T  S WKSGDWIC RSGCNEHNFASR ECFRC+AP++
Subjt:  ---FDFDIPRRSPRGISPFAFASP--ARTAASAWKSGDWICARSGCNEHNFASRMECFRCSAPRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAGACCGGGAGACTGGAACTGTAGGTCATGCCAGCATTTGAACTTCCAGAGGAGGGACATGTGCCAGCGGTGCGGCGATCCGAAGAGCGGCGGTGGTGTCGGAAG
AGGTGGGTCTGGTTTTGGGTACGGAGGGTCGGATGTGAGGCCCGGAGACTGGTACTGTAGTGTGGGAAATTGTGGAGCTCATAATTTTGCAAGCCGATCAAGCTGCTTCA
AATGTGGGGCTTTCAAAGACGACATGTCGGCCTTCGACTTCGATATTCCACGTCGTAGTCCTAGAGGGATTTCCCCATTTGCTTTTGCCAGTCCTGCTCGTACTGCTGCC
TCCGCTTGGAAGTCCGGTGACTGGATTTGTGCAAGGTCGGGTTGCAATGAACATAACTTTGCAAGCAGGATGGAGTGCTTTAGATGCAGTGCTCCGAGAGACTCCTACTA
A
mRNA sequenceShow/hide mRNA sequence
AAACAACCCTTCCCTTCTTTACCTATTCCATCGCCATTCTTAATTCTTCTTCTCTTTTTCTTTCTTTCTTTCTTTAACCACTCTTAAGAGAGAAAGAGAAGATGAGTAGA
CCGGGAGACTGGAACTGTAGGTCATGCCAGCATTTGAACTTCCAGAGGAGGGACATGTGCCAGCGGTGCGGCGATCCGAAGAGCGGCGGTGGTGTCGGAAGAGGTGGGTC
TGGTTTTGGGTACGGAGGGTCGGATGTGAGGCCCGGAGACTGGTACTGTAGTGTGGGAAATTGTGGAGCTCATAATTTTGCAAGCCGATCAAGCTGCTTCAAATGTGGGG
CTTTCAAAGACGACATGTCGGCCTTCGACTTCGATATTCCACGTCGTAGTCCTAGAGGGATTTCCCCATTTGCTTTTGCCAGTCCTGCTCGTACTGCTGCCTCCGCTTGG
AAGTCCGGTGACTGGATTTGTGCAAGGTCGGGTTGCAATGAACATAACTTTGCAAGCAGGATGGAGTGCTTTAGATGCAGTGCTCCGAGAGACTCCTACTAACAAAACTA
GCCAAGTCAAAATCCTCCTTCATCATCAAGTTTTGGGTATGCTTTCAACTGAGAAAAATTTCAAAGAGACTTCATAACCTGCACTACCTTTTCTTCTCTCTCTCTCTTTT
TTGTTTTTTTTTTTTTTTTTTGTTTTGTAACTTTTTAATGAGTGATGTTAATTTATGTGATGAAAAAAAAATTGAGATATTGTCGAAAAATCAATCTTCAATCTCTGTTT
CTTTTTAACAAAATACTAAAGTTCGAAGTGTTGGTAGTTAC
Protein sequenceShow/hide protein sequence
MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGVGRGGSGFGYGGSDVRPGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPFAFASPARTAA
SAWKSGDWICARSGCNEHNFASRMECFRCSAPRDSY