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PI0028772 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028772
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr10:10571566..10572066
RNA-Seq ExpressionPI0028772
SyntenyPI0028772
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041264.1 hypothetical protein E6C27_scaffold128G002490 [Cucumis melo var. makuwa]5.6e-2241.26Show/hide
Query:  REALEVIAWPGATWEIMPTGKYQLHPHQLTTEANMWLFFLKKKIFSTRHDNTINLESAMLLYCILMKWRMNLGDLIATTILSWMRAPKGAMPFPSTVEAL
        ++ALE I WPG  W+ MPT KYQL P+ L TE ++WL F+KK I  TRHD+TI++E  MLLY      + N  ++    +++W++ P GA PF    + L
Subjt:  REALEVIAWPGATWEIMPTGKYQLHPHQLTTEANMWLFFLKKKIFSTRHDNTINLESAMLLYCILMKWRMNLGDLIATTILSWMRAPKGAMPFPSTVEAL

Query:  CVKAHPFLCVVNQMPIPGGLCSLVALNRMITLHAHKEMERRLK
         +KA+P L    Q+ +  G+C    L+R IT+H +K   R L+
Subjt:  CVKAHPFLCVVNQMPIPGGLCSLVALNRMITLHAHKEMERRLK

KAA0049609.1 transposase [Cucumis melo var. makuwa]1.3e-2343.59Show/hide
Query:  AREALEVIAWPGATWEIMPTGKYQLHPHQLTTEANMWLFFLKKKIFSTRHDNTINLESAMLLYCILMKWRMNLGDLIATTILSWMRAPKGAMPFPSTVEA
        A++ +++I WP A     PT + QL PHQLT EAN+WLFF+KKKIF T HD+TI  E A++LYCI  K   NLG ++    LSWMR PK A PFP+TV+ 
Subjt:  AREALEVIAWPGATWEIMPTGKYQLHPHQLTTEANMWLFFLKKKIFSTRHDNTINLESAMLLYCILMKWRMNLGDLIATTILSWMRAPKGAMPFPSTVEA

Query:  LCVK-AHPFLCVVNQMPIPGGLCSLVALNRMITLHAHKEMERRLKTLGQDRKRGRD
        LC+K        + Q+ + GG C+L     + T      ++R+  T G +   G+D
Subjt:  LCVK-AHPFLCVVNQMPIPGGLCSLVALNRMITLHAHKEMERRLKTLGQDRKRGRD

KAA0054837.1 hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa]6.1e-2146.15Show/hide
Query:  REALEVIAWPGATWEIMPTGKYQLHPHQLTTEANMWLFFLKKKIFSTRHDNTINLESAMLLYCILMKWRMNLGDLIATTILSWMRAPKGAMPFPSTVEAL
        +EALE +AW    W++    KY+L  H LTTEA++WL F+KKK+  TRHDNTI+ E  MLLYCI+ +  +++ ++I   I +W++ P+GA PFP  +E L
Subjt:  REALEVIAWPGATWEIMPTGKYQLHPHQLTTEANMWLFFLKKKIFSTRHDNTINLESAMLLYCILMKWRMNLGDLIATTILSWMRAPKGAMPFPSTVEAL

Query:  CVKA
        C+++
Subjt:  CVKA

KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]9.2e-2550Show/hide
Query:  MAREALEVIAWPGATWEIMPTG-KYQLHPHQLTTEANMWLFFLKKKIFSTRHDNTINLESAMLLYCILMKWRMNLGDLIATTILSWMRAPKGAMPFPSTV
        +A+EAL+V+AWPG   E+ P   +YQL+PH LTT+AN+W+FF K KIF T +D+TI+++  ++LYCI++K  +NL ++I   IL+WM  PK AMPFPS +
Subjt:  MAREALEVIAWPGATWEIMPTG-KYQLHPHQLTTEANMWLFFLKKKIFSTRHDNTINLESAMLLYCILMKWRMNLGDLIATTILSWMRAPKGAMPFPSTV

Query:  EALCVKAHPFLCVVNQMPIP
        E LC+K  P L    +  IP
Subjt:  EALCVKAHPFLCVVNQMPIP

TYK15967.1 hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa]1.3e-2343.59Show/hide
Query:  AREALEVIAWPGATWEIMPTGKYQLHPHQLTTEANMWLFFLKKKIFSTRHDNTINLESAMLLYCILMKWRMNLGDLIATTILSWMRAPKGAMPFPSTVEA
        A++ +++I WP A     PT + QL PHQLT EAN+WLFF+KKKIF T HD+TI  E A++LYCI  K   NLG ++    LSWMR PK A PFP+TV+ 
Subjt:  AREALEVIAWPGATWEIMPTGKYQLHPHQLTTEANMWLFFLKKKIFSTRHDNTINLESAMLLYCILMKWRMNLGDLIATTILSWMRAPKGAMPFPSTVEA

Query:  LCVK-AHPFLCVVNQMPIPGGLCSLVALNRMITLHAHKEMERRLKTLGQDRKRGRD
        LC+K        + Q+ + GG C+L     + T      ++R+  T G +   G+D
Subjt:  LCVK-AHPFLCVVNQMPIPGGLCSLVALNRMITLHAHKEMERRLKTLGQDRKRGRD

TrEMBL top hitse value%identityAlignment
A0A5A7U806 Transposase6.4e-2443.59Show/hide
Query:  AREALEVIAWPGATWEIMPTGKYQLHPHQLTTEANMWLFFLKKKIFSTRHDNTINLESAMLLYCILMKWRMNLGDLIATTILSWMRAPKGAMPFPSTVEA
        A++ +++I WP A     PT + QL PHQLT EAN+WLFF+KKKIF T HD+TI  E A++LYCI  K   NLG ++    LSWMR PK A PFP+TV+ 
Subjt:  AREALEVIAWPGATWEIMPTGKYQLHPHQLTTEANMWLFFLKKKIFSTRHDNTINLESAMLLYCILMKWRMNLGDLIATTILSWMRAPKGAMPFPSTVEA

Query:  LCVK-AHPFLCVVNQMPIPGGLCSLVALNRMITLHAHKEMERRLKTLGQDRKRGRD
        LC+K        + Q+ + GG C+L     + T      ++R+  T G +   G+D
Subjt:  LCVK-AHPFLCVVNQMPIPGGLCSLVALNRMITLHAHKEMERRLKTLGQDRKRGRD

A0A5A7V6M5 Gag/pol protein4.4e-2550Show/hide
Query:  MAREALEVIAWPGATWEIMPTG-KYQLHPHQLTTEANMWLFFLKKKIFSTRHDNTINLESAMLLYCILMKWRMNLGDLIATTILSWMRAPKGAMPFPSTV
        +A+EAL+V+AWPG   E+ P   +YQL+PH LTT+AN+W+FF K KIF T +D+TI+++  ++LYCI++K  +NL ++I   IL+WM  PK AMPFPS +
Subjt:  MAREALEVIAWPGATWEIMPTG-KYQLHPHQLTTEANMWLFFLKKKIFSTRHDNTINLESAMLLYCILMKWRMNLGDLIATTILSWMRAPKGAMPFPSTV

Query:  EALCVKAHPFLCVVNQMPIP
        E LC+K  P L    +  IP
Subjt:  EALCVKAHPFLCVVNQMPIP

A0A5D3CVL7 Uncharacterized protein6.4e-2443.59Show/hide
Query:  AREALEVIAWPGATWEIMPTGKYQLHPHQLTTEANMWLFFLKKKIFSTRHDNTINLESAMLLYCILMKWRMNLGDLIATTILSWMRAPKGAMPFPSTVEA
        A++ +++I WP A     PT + QL PHQLT EAN+WLFF+KKKIF T HD+TI  E A++LYCI  K   NLG ++    LSWMR PK A PFP+TV+ 
Subjt:  AREALEVIAWPGATWEIMPTGKYQLHPHQLTTEANMWLFFLKKKIFSTRHDNTINLESAMLLYCILMKWRMNLGDLIATTILSWMRAPKGAMPFPSTVEA

Query:  LCVK-AHPFLCVVNQMPIPGGLCSLVALNRMITLHAHKEMERRLKTLGQDRKRGRD
        LC+K        + Q+ + GG C+L     + T      ++R+  T G +   G+D
Subjt:  LCVK-AHPFLCVVNQMPIPGGLCSLVALNRMITLHAHKEMERRLKTLGQDRKRGRD

A0A5D3CW17 Uncharacterized protein2.7e-2241.26Show/hide
Query:  REALEVIAWPGATWEIMPTGKYQLHPHQLTTEANMWLFFLKKKIFSTRHDNTINLESAMLLYCILMKWRMNLGDLIATTILSWMRAPKGAMPFPSTVEAL
        ++ALE I WPG  W+ MPT KYQL P+ L TE ++WL F+KK I  TRHD+TI++E  MLLY      + N  ++    +++W++ P GA PF    + L
Subjt:  REALEVIAWPGATWEIMPTGKYQLHPHQLTTEANMWLFFLKKKIFSTRHDNTINLESAMLLYCILMKWRMNLGDLIATTILSWMRAPKGAMPFPSTVEAL

Query:  CVKAHPFLCVVNQMPIPGGLCSLVALNRMITLHAHKEMERRLK
         +KA+P L    Q+ +  G+C    L+R IT+H +K   R L+
Subjt:  CVKAHPFLCVVNQMPIPGGLCSLVALNRMITLHAHKEMERRLK

A0A5D3DVQ6 Uncharacterized protein3.0e-2146.15Show/hide
Query:  REALEVIAWPGATWEIMPTGKYQLHPHQLTTEANMWLFFLKKKIFSTRHDNTINLESAMLLYCILMKWRMNLGDLIATTILSWMRAPKGAMPFPSTVEAL
        +EALE +AW    W++    KY+L  H LTTEA++WL F+KKK+  TRHDNTI+ E  MLLYCI+ +  +++ ++I   I +W++ P+GA PFP  +E L
Subjt:  REALEVIAWPGATWEIMPTGKYQLHPHQLTTEANMWLFFLKKKIFSTRHDNTINLESAMLLYCILMKWRMNLGDLIATTILSWMRAPKGAMPFPSTVEAL

Query:  CVKA
        C+++
Subjt:  CVKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCGTGAAGCATTGGAGGTCATCGCCTGGCCTGGGGCGACATGGGAGATTATGCCTACTGGGAAATATCAACTTCACCCACACCAGCTGACTACTGAAGCAAATAT
GTGGCTGTTCTTCCTAAAAAAGAAGATATTTTCCACGCGCCATGACAATACCATCAACTTAGAATCTGCGATGCTACTGTACTGCATTCTGATGAAATGGCGCATGAACC
TAGGTGATTTGATAGCTACCACCATCCTTTCTTGGATGCGAGCTCCCAAGGGTGCCATGCCCTTCCCATCCACTGTGGAGGCACTATGCGTGAAGGCCCATCCTTTTCTT
TGCGTCGTCAACCAGATGCCCATTCCAGGTGGCCTATGCAGCCTAGTGGCTTTGAATCGCATGATTACTCTCCACGCCCACAAAGAAATGGAGAGGCGGTTAAAGACACT
GGGCCAGGACAGAAAAAGAGGGCGAGACTCTAGTAGACTCCCACAAAGGAAAAGCCCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCCGTGAAGCATTGGAGGTCATCGCCTGGCCTGGGGCGACATGGGAGATTATGCCTACTGGGAAATATCAACTTCACCCACACCAGCTGACTACTGAAGCAAATAT
GTGGCTGTTCTTCCTAAAAAAGAAGATATTTTCCACGCGCCATGACAATACCATCAACTTAGAATCTGCGATGCTACTGTACTGCATTCTGATGAAATGGCGCATGAACC
TAGGTGATTTGATAGCTACCACCATCCTTTCTTGGATGCGAGCTCCCAAGGGTGCCATGCCCTTCCCATCCACTGTGGAGGCACTATGCGTGAAGGCCCATCCTTTTCTT
TGCGTCGTCAACCAGATGCCCATTCCAGGTGGCCTATGCAGCCTAGTGGCTTTGAATCGCATGATTACTCTCCACGCCCACAAAGAAATGGAGAGGCGGTTAAAGACACT
GGGCCAGGACAGAAAAAGAGGGCGAGACTCTAGTAGACTCCCACAAAGGAAAAGCCCCTAG
Protein sequenceShow/hide protein sequence
MAREALEVIAWPGATWEIMPTGKYQLHPHQLTTEANMWLFFLKKKIFSTRHDNTINLESAMLLYCILMKWRMNLGDLIATTILSWMRAPKGAMPFPSTVEALCVKAHPFL
CVVNQMPIPGGLCSLVALNRMITLHAHKEMERRLKTLGQDRKRGRDSSRLPQRKSP